Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 SNORD114-10-201ENST00000363409 72 ntBASIC1.41□□□□□ -2.18
PTCD3Q96EY7 RNU6-580P-201ENST00000365159 107 ntBASIC1.41□□□□□ -2.18
PTCD3Q96EY7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.41□□□□□ -2.18
PTCD3Q96EY7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.41□□□□□ -2.18
PTCD3Q96EY7 RNU6-1321P-201ENST00000390905 107 ntBASIC1.41□□□□□ -2.18
PTCD3Q96EY7 RNA5SP237-201ENST00000410414 113 ntBASIC1.41□□□□□ -2.18
PTCD3Q96EY7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.41□□□□□ -2.18
PTCD3Q96EY7 RNU6-1006P-201ENST00000516998 103 ntBASIC1.41□□□□□ -2.18
PTCD3Q96EY7 AP000753.3-201ENST00000604083 169 ntBASIC1.41□□□□□ -2.18
PTCD3Q96EY7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
PTCD3Q96EY7 RNU4-36P-201ENST00000364294 144 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 Y_RNA.247-201ENST00000364500 92 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 Y_RNA.377-201ENST00000365644 108 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 RNU6-949P-201ENST00000384040 107 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 Y_RNA.448-201ENST00000384185 108 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 RNU6-1165P-201ENST00000410119 107 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 Y_RNA.601-201ENST00000410500 113 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 AL354695.1-201ENST00000427935 228 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 AC108729.3-201ENST00000513484 108 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 SCARNA23-201ENST00000516060 130 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 Y_RNA.694-201ENST00000516677 117 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 RN7SKP88-201ENST00000516847 250 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 7SK.8-201ENST00000612110 250 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 7SK.11-201ENST00000615477 250 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 7SK.13-201ENST00000622040 250 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 AL512310.12-203ENST00000640543 90 ntBASIC1.4□□□□□ -2.19
PTCD3Q96EY7 MIR377-201ENST00000362145 69 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 Y_RNA.43-201ENST00000362670 111 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 Y_RNA.466-201ENST00000384294 113 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 MIR34C-201ENST00000384831 77 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 AC096949.1-201ENST00000412047 152 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 MTATP8P2-201ENST00000435212 202 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 RNU7-62P-201ENST00000458856 62 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 SNORA40.13-201ENST00000516379 120 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.39□□□□□ -2.19
PTCD3Q96EY7 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.39□□□□□ -2.19
PTCD3Q96EY7 MIR548Z-201ENST00000584743 97 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 AL645939.4-201ENST00000604495 135 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 MIR376B-201ENST00000614515 100 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 AL442128.1-201ENST00000615151 90 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 AC012531.4-201ENST00000616509 177 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 AC091304.10-201ENST00000641554 121 ntBASIC1.39□□□□□ -2.19
PTCD3Q96EY7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
PTCD3Q96EY7 RNU6-1255P-201ENST00000363434 112 ntBASIC1.38□□□□□ -2.19
PTCD3Q96EY7 AC108667.1-201ENST00000428618 249 ntBASIC1.38□□□□□ -2.19
PTCD3Q96EY7 SNORA31.2-201ENST00000516019 134 ntBASIC1.38□□□□□ -2.19
PTCD3Q96EY7 RNU6-158P-201ENST00000517104 100 ntBASIC1.38□□□□□ -2.19
PTCD3Q96EY7 MIR4498-201ENST00000577599 66 ntBASIC1.38□□□□□ -2.19
PTCD3Q96EY7 MIR5582-201ENST00000579697 68 ntBASIC1.38□□□□□ -2.19
PTCD3Q96EY7 SEPT14P17-201ENST00000617978 177 ntBASIC1.38□□□□□ -2.19
PTCD3Q96EY7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.19
PTCD3Q96EY7 Y_RNA.93-201ENST00000363066 109 ntBASIC1.37□□□□□ -2.19
PTCD3Q96EY7 MIR488-201ENST00000365739 83 ntBASIC1.37□□□□□ -2.19
PTCD3Q96EY7 MIR758-201ENST00000390227 88 ntBASIC1.37□□□□□ -2.19
PTCD3Q96EY7 U8.15-201ENST00000390947 134 ntBASIC1.37□□□□□ -2.19
PTCD3Q96EY7 SNORA75.2-201ENST00000391138 150 ntBASIC1.37□□□□□ -2.19
PTCD3Q96EY7 SNORA75.3-201ENST00000391231 150 ntBASIC1.37□□□□□ -2.19
PTCD3Q96EY7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.37□□□□□ -2.19
PTCD3Q96EY7 RNU6-795P-201ENST00000516323 103 ntBASIC1.37□□□□□ -2.19
PTCD3Q96EY7 MIR4777-201ENST00000583710 86 ntBASIC1.37□□□□□ -2.19
PTCD3Q96EY7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.37□□□□□ -2.19
PTCD3Q96EY7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.36□□□□□ -2.19
PTCD3Q96EY7 Y_RNA.10-201ENST00000362371 110 ntBASIC1.36□□□□□ -2.19
PTCD3Q96EY7 RNU6-170P-201ENST00000362832 104 ntBASIC1.36□□□□□ -2.19
PTCD3Q96EY7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.36□□□□□ -2.19
PTCD3Q96EY7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.36□□□□□ -2.19
PTCD3Q96EY7 RNY4P30-201ENST00000410216 95 ntBASIC1.36□□□□□ -2.19
PTCD3Q96EY7 RNU7-48P-201ENST00000458875 63 ntBASIC1.36□□□□□ -2.19
PTCD3Q96EY7 SNORA4-201ENST00000584302 138 ntBASIC1.36□□□□□ -2.19
PTCD3Q96EY7 AL161722.3-201ENST00000605789 2983 ntBASIC1.36□□□□□ -2.19
PTCD3Q96EY7 MIR378A-201ENST00000362177 66 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 Y_RNA.98-201ENST00000363109 102 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 Y_RNA.107-201ENST00000363190 121 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 Y_RNA.168-201ENST00000363740 102 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 RNU6-447P-201ENST00000410293 104 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 RNU6-1118P-201ENST00000410382 104 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 RNU6-1076P-201ENST00000410397 104 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 RNU6-355P-201ENST00000410427 104 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 RNU6-791P-201ENST00000410467 104 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 RNU6-705P-201ENST00000410601 104 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 RNU6-1100P-201ENST00000410691 104 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 RNU6-860P-201ENST00000410860 104 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 RNU6-1217P-201ENST00000411276 104 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 RNU6-785P-201ENST00000411324 104 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 snoU13.21-201ENST00000459368 105 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 snoU13.31-201ENST00000607291 104 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 U6.90-201ENST00000614007 104 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 U6.70-201ENST00000620287 104 ntBASIC1.35□□□□□ -2.19
PTCD3Q96EY7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
PTCD3Q96EY7 RNU6-865P-201ENST00000364772 107 ntBASIC1.34□□□□□ -2.19
PTCD3Q96EY7 MRPL35P3-201ENST00000421557 364 ntBASIC1.34□□□□□ -2.19
PTCD3Q96EY7 AC004941.2-201ENST00000427009 228 ntBASIC1.34□□□□□ -2.19
PTCD3Q96EY7 AC036111.3-201ENST00000526389 112 ntBASIC1.34□□□□□ -2.19
PTCD3Q96EY7 MIR4303-201ENST00000581299 66 ntBASIC1.34□□□□□ -2.19
PTCD3Q96EY7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.34□□□□□ -2.19
PTCD3Q96EY7 Y_RNA.95-201ENST00000363079 95 ntBASIC1.33□□□□□ -2.2
PTCD3Q96EY7 SNORD38.1-201ENST00000363863 68 ntBASIC1.33□□□□□ -2.2
PTCD3Q96EY7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 217.9 ms