Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 Y_RNA.697-201ENST00000516776 113 ntBASIC0.19□□□□□ -2.38
LHX4Q969G2 RNA5SP268-201ENST00000516828 124 ntBASIC0.19□□□□□ -2.38
LHX4Q969G2 MTND5P34-201ENST00000568888 325 ntBASIC0.19□□□□□ -2.38
LHX4Q969G2 SNORD115-2-201ENST00000362842 82 ntBASIC0.18□□□□□ -2.38
LHX4Q969G2 RNU6-702P-201ENST00000364982 107 ntBASIC0.18□□□□□ -2.38
LHX4Q969G2 SNORD115-20-201ENST00000365099 82 ntBASIC0.18□□□□□ -2.38
LHX4Q969G2 RNU6-535P-201ENST00000384722 107 ntBASIC0.18□□□□□ -2.38
LHX4Q969G2 SNORA62.5-201ENST00000516634 120 ntBASIC0.18□□□□□ -2.38
LHX4Q969G2 MIR3149-201ENST00000584629 83 ntBASIC0.18□□□□□ -2.38
LHX4Q969G2 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
LHX4Q969G2 MIR6828-201ENST00000636181 60 ntBASIC0.18□□□□□ -2.38
LHX4Q969G2 Y_RNA.83-201ENST00000363005 113 ntBASIC0.17□□□□□ -2.38
LHX4Q969G2 Y_RNA.200-201ENST00000364018 102 ntBASIC0.17□□□□□ -2.38
LHX4Q969G2 RNU6-1082P-201ENST00000364574 107 ntBASIC0.17□□□□□ -2.38
LHX4Q969G2 Y_RNA.307-201ENST00000365022 117 ntBASIC0.17□□□□□ -2.38
LHX4Q969G2 RNU6-47P-201ENST00000383866 107 ntBASIC0.17□□□□□ -2.38
LHX4Q969G2 RNU2-59P-201ENST00000410482 191 ntBASIC0.17□□□□□ -2.38
LHX4Q969G2 AC107027.2-201ENST00000512197 115 ntBASIC0.17□□□□□ -2.38
LHX4Q969G2 RNU6-1194P-201ENST00000516208 104 ntBASIC0.17□□□□□ -2.38
LHX4Q969G2 RNA5SP330-201ENST00000517096 96 ntBASIC0.17□□□□□ -2.38
LHX4Q969G2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.17□□□□□ -2.38
LHX4Q969G2 RNA5SP47-201ENST00000517230 109 ntBASIC0.17□□□□□ -2.38
LHX4Q969G2 MIR4503-201ENST00000582187 83 ntBASIC0.17□□□□□ -2.38
LHX4Q969G2 AC023932.2-201ENST00000603176 175 ntBASIC0.17□□□□□ -2.38
LHX4Q969G2 MIR7107-201ENST00000611489 80 ntBASIC0.17□□□□□ -2.38
LHX4Q969G2 Y_RNA.120-201ENST00000363304 110 ntBASIC0.16□□□□□ -2.38
LHX4Q969G2 RNU6-1020P-201ENST00000363684 107 ntBASIC0.16□□□□□ -2.38
LHX4Q969G2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.16□□□□□ -2.38
LHX4Q969G2 Y_RNA.258-201ENST00000364613 105 ntBASIC0.16□□□□□ -2.38
LHX4Q969G2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
LHX4Q969G2 SUMO1P3-201ENST00000439961 304 ntBASIC0.16□□□□□ -2.38
LHX4Q969G2 RNA5SP33-201ENST00000516687 98 ntBASIC0.16□□□□□ -2.38
LHX4Q969G2 RNU6-1099P-201ENST00000363533 107 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 Y_RNA.193-201ENST00000363979 102 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 RNU6-312P-201ENST00000364629 107 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 RNU6-818P-201ENST00000364837 108 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 RNU6-690P-201ENST00000365242 106 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 RNU6-716P-201ENST00000365621 103 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 RNU6-815P-201ENST00000384080 113 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 Y_RNA.452-201ENST00000384202 108 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 RNU6-196P-201ENST00000384315 107 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 SNORD28-201ENST00000384706 75 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 AC073261.1-201ENST00000429409 121 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 RNU6-531P-201ENST00000516694 104 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 AC069113.3-201ENST00000521019 150 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 DEFB131E-201ENST00000532329 154 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 AC112693.2-201ENST00000556538 232 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 MIR4639-201ENST00000584938 69 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 AC011603.4-201ENST00000611325 277 ntBASIC0.15□□□□□ -2.39
LHX4Q969G2 RNU4-58P-201ENST00000363192 141 ntBASIC0.14□□□□□ -2.39
LHX4Q969G2 RNA5SP133-201ENST00000363368 119 ntBASIC0.14□□□□□ -2.39
LHX4Q969G2 RNA5SP457-201ENST00000363657 124 ntBASIC0.14□□□□□ -2.39
LHX4Q969G2 RNA5SP325-201ENST00000363756 130 ntBASIC0.14□□□□□ -2.39
LHX4Q969G2 RNU4-67P-201ENST00000364569 141 ntBASIC0.14□□□□□ -2.39
LHX4Q969G2 SNORA32-201ENST00000384072 121 ntBASIC0.14□□□□□ -2.39
LHX4Q969G2 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
LHX4Q969G2 SNORA75.5-201ENST00000391291 81 ntBASIC0.14□□□□□ -2.39
LHX4Q969G2 MIR1197-201ENST00000408818 88 ntBASIC0.14□□□□□ -2.39
LHX4Q969G2 RNA5SP227-201ENST00000516184 113 ntBASIC0.14□□□□□ -2.39
LHX4Q969G2 MIR4305-201ENST00000583252 102 ntBASIC0.14□□□□□ -2.39
LHX4Q969G2 AC009779.6-201ENST00000603972 165 ntBASIC0.14□□□□□ -2.39
LHX4Q969G2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.14□□□□□ -2.39
LHX4Q969G2 U6.109-201ENST00000636749 87 ntBASIC0.14□□□□□ -2.39
LHX4Q969G2 Y_RNA.115-201ENST00000363272 98 ntBASIC0.13□□□□□ -2.39
LHX4Q969G2 Y_RNA.337-201ENST00000365312 102 ntBASIC0.13□□□□□ -2.39
LHX4Q969G2 RNU6-1219P-201ENST00000516143 112 ntBASIC0.13□□□□□ -2.39
LHX4Q969G2 RNU2-35P-201ENST00000516446 142 ntBASIC0.13□□□□□ -2.39
LHX4Q969G2 RNU7-137P-201ENST00000516788 62 ntBASIC0.13□□□□□ -2.39
LHX4Q969G2 MIR548AE2-201ENST00000583456 67 ntBASIC0.13□□□□□ -2.39
LHX4Q969G2 MIR4315-1-201ENST00000636800 73 ntBASIC0.13□□□□□ -2.39
LHX4Q969G2 MIR4315-2-201ENST00000640925 73 ntBASIC0.13□□□□□ -2.39
LHX4Q969G2 AC091304.10-201ENST00000641554 121 ntBASIC0.13□□□□□ -2.39
LHX4Q969G2 Y_RNA.233-201ENST00000364407 101 ntBASIC0.12□□□□□ -2.39
LHX4Q969G2 Y_RNA.357-201ENST00000365487 109 ntBASIC0.12□□□□□ -2.39
LHX4Q969G2 Y_RNA.366-201ENST00000365540 102 ntBASIC0.12□□□□□ -2.39
LHX4Q969G2 RNU6-574P-201ENST00000384265 107 ntBASIC0.12□□□□□ -2.39
LHX4Q969G2 Y_RNA.497-201ENST00000384447 98 ntBASIC0.12□□□□□ -2.39
LHX4Q969G2 Y_RNA.531-201ENST00000384589 121 ntBASIC0.12□□□□□ -2.39
LHX4Q969G2 MIRLET7F2-201ENST00000385277 83 ntBASIC0.12□□□□□ -2.39
LHX4Q969G2 AC069271.1-201ENST00000445577 156 ntBASIC0.12□□□□□ -2.39
LHX4Q969G2 AC138749.4-201ENST00000563970 127 ntBASIC0.12□□□□□ -2.39
LHX4Q969G2 MIR4719-201ENST00000585233 84 ntBASIC0.12□□□□□ -2.39
LHX4Q969G2 AC098479.1-201ENST00000609225 154 ntBASIC0.12□□□□□ -2.39
LHX4Q969G2 MIR6755-201ENST00000619993 66 ntBASIC0.12□□□□□ -2.39
LHX4Q969G2 RNA5SP245-201ENST00000364239 121 ntBASIC0.11□□□□□ -2.39
LHX4Q969G2 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
LHX4Q969G2 Y_RNA.793-201ENST00000411222 111 ntBASIC0.11□□□□□ -2.39
LHX4Q969G2 MTATP6P21-201ENST00000440681 189 ntBASIC0.11□□□□□ -2.39
LHX4Q969G2 SNORD67.1-201ENST00000516618 108 ntBASIC0.11□□□□□ -2.39
LHX4Q969G2 RNU2-60P-201ENST00000517290 128 ntBASIC0.11□□□□□ -2.39
LHX4Q969G2 AC130289.1-201ENST00000577321 73 ntBASIC0.11□□□□□ -2.39
LHX4Q969G2 MIR3646-201ENST00000578301 84 ntBASIC0.11□□□□□ -2.39
LHX4Q969G2 AL359881.1-201ENST00000602916 267 ntBASIC0.11□□□□□ -2.39
LHX4Q969G2 TUG1_4.1-201ENST00000619464 181 ntBASIC0.11□□□□□ -2.39
LHX4Q969G2 AC244669.1-204ENST00000621564 178 ntBASIC0.11□□□□□ -2.39
LHX4Q969G2 SNORD114-10-201ENST00000363409 72 ntBASIC0.1□□□□□ -2.39
LHX4Q969G2 Y_RNA.476-201ENST00000384347 108 ntBASIC0.1□□□□□ -2.39
LHX4Q969G2 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
LHX4Q969G2 RNA5SP63-201ENST00000391225 112 ntBASIC0.1□□□□□ -2.39
LHX4Q969G2 RNU6-240P-201ENST00000516098 97 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms