Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RNU6-1194P-201ENST00000516208 104 ntBASIC2.66□□□□□ -1.98
HLA-CQ95604 RNU6-922P-201ENST00000516753 99 ntBASIC2.66□□□□□ -1.98
HLA-CQ95604 MIR4635-201ENST00000583759 79 ntBASIC2.66□□□□□ -1.98
HLA-CQ95604 SNORD92-201ENST00000585078 85 ntBASIC2.66□□□□□ -1.98
HLA-CQ95604 MIR1297-201ENST00000637311 77 ntBASIC2.66□□□□□ -1.98
HLA-CQ95604 VTRNA1-1-201ENST00000363120 99 ntBASIC2.65□□□□□ -1.99
HLA-CQ95604 AC023790.1-201ENST00000482174 347 ntBASIC2.65□□□□□ -1.99
HLA-CQ95604 AC015688.6-201ENST00000577737 104 ntBASIC2.65□□□□□ -1.99
HLA-CQ95604 MIR3605-201ENST00000583214 100 ntBASIC2.65□□□□□ -1.99
HLA-CQ95604 AC093831.2-201ENST00000624393 3427 ntBASIC2.65□□□□□ -1.99
HLA-CQ95604 AC016717.2-201ENST00000609089 5141 ntBASIC2.64□□□□□ -1.99
HLA-CQ95604 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-CQ95604 RNU4-58P-201ENST00000363192 141 ntBASIC2.64□□□□□ -1.99
HLA-CQ95604 SNORA46-201ENST00000384762 135 ntBASIC2.64□□□□□ -1.99
HLA-CQ95604 RNU6-466P-201ENST00000391224 103 ntBASIC2.64□□□□□ -1.99
HLA-CQ95604 AL359511.1-201ENST00000402970 211 ntBASIC2.64□□□□□ -1.99
HLA-CQ95604 MIR1287-201ENST00000408492 90 ntBASIC2.64□□□□□ -1.99
HLA-CQ95604 RN7SL75P-201ENST00000461926 281 ntBASIC2.64□□□□□ -1.99
HLA-CQ95604 AP003716.2-201ENST00000528260 108 ntBASIC2.64□□□□□ -1.99
HLA-CQ95604 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-CQ95604 AC245884.12-201ENST00000615364 59 ntBASIC2.64□□□□□ -1.99
HLA-CQ95604 Y_RNA.283-201ENST00000364798 112 ntBASIC2.63□□□□□ -1.99
HLA-CQ95604 MIR18B-201ENST00000454574 71 ntBASIC2.63□□□□□ -1.99
HLA-CQ95604 AC055731.1-201ENST00000474387 401 ntBASIC2.63□□□□□ -1.99
HLA-CQ95604 AL133373.1-201ENST00000497098 94 ntBASIC2.63□□□□□ -1.99
HLA-CQ95604 RNU6-807P-201ENST00000516805 107 ntBASIC2.63□□□□□ -1.99
HLA-CQ95604 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-CQ95604 AL359851.1-201ENST00000569460 4997 ntBASIC2.63□□□□□ -1.99
HLA-CQ95604 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-CQ95604 RNU6-411P-201ENST00000384451 107 ntBASIC2.62□□□□□ -1.99
HLA-CQ95604 AC245517.4-201ENST00000448601 281 ntBASIC2.62□□□□□ -1.99
HLA-CQ95604 RNU6-871P-201ENST00000516122 100 ntBASIC2.62□□□□□ -1.99
HLA-CQ95604 RNU6-523P-201ENST00000516304 54 ntBASIC2.62□□□□□ -1.99
HLA-CQ95604 AC104996.3-201ENST00000590718 94 ntBASIC2.62□□□□□ -1.99
HLA-CQ95604 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.62□□□□□ -1.99
HLA-CQ95604 MIR6873-201ENST00000622788 63 ntBASIC2.62□□□□□ -1.99
HLA-CQ95604 AC005908.1-201ENST00000468701 347 ntBASIC2.61□□□□□ -1.99
HLA-CQ95604 SNRPGP19-201ENST00000603826 189 ntBASIC2.61□□□□□ -1.99
HLA-CQ95604 RNU7-10P-201ENST00000607194 63 ntBASIC2.61□□□□□ -1.99
HLA-CQ95604 AC131280.1-202ENST00000624067 4211 ntBASIC2.61□□□□□ -1.99
HLA-CQ95604 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-CQ95604 RNU6-580P-201ENST00000365159 107 ntBASIC2.6□□□□□ -1.99
HLA-CQ95604 MIR516A2-201ENST00000384888 90 ntBASIC2.6□□□□□ -1.99
HLA-CQ95604 MIR516A1-201ENST00000385033 90 ntBASIC2.6□□□□□ -1.99
HLA-CQ95604 MIR524-201ENST00000385242 87 ntBASIC2.6□□□□□ -1.99
HLA-CQ95604 SNORD77.2-201ENST00000391045 68 ntBASIC2.6□□□□□ -1.99
HLA-CQ95604 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-CQ95604 AC004223.1-201ENST00000479840 271 ntBASIC2.6□□□□□ -1.99
HLA-CQ95604 RNU6-75P-201ENST00000515944 104 ntBASIC2.6□□□□□ -1.99
HLA-CQ95604 SNORA18.5-201ENST00000516616 101 ntBASIC2.6□□□□□ -1.99
HLA-CQ95604 MIR3064-201ENST00000581130 66 ntBASIC2.6□□□□□ -1.99
HLA-CQ95604 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-CQ95604 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
HLA-CQ95604 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-CQ95604 MIR519A1-201ENST00000385257 85 ntBASIC2.59□□□□□ -1.99
HLA-CQ95604 SNORA9.3-201ENST00000516383 129 ntBASIC2.59□□□□□ -1.99
HLA-CQ95604 RNU6-539P-201ENST00000516665 103 ntBASIC2.59□□□□□ -1.99
HLA-CQ95604 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.59□□□□□ -1.99
HLA-CQ95604 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-CQ95604 AL596028.1-201ENST00000326971 197 ntBASIC2.58□□□□□ -2
HLA-CQ95604 Y_RNA.491-201ENST00000384417 107 ntBASIC2.58□□□□□ -2
HLA-CQ95604 RNA5SP292-201ENST00000390974 118 ntBASIC2.58□□□□□ -2
HLA-CQ95604 RNU6-1053P-201ENST00000515930 101 ntBASIC2.58□□□□□ -2
HLA-CQ95604 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.58□□□□□ -2
HLA-CQ95604 AC046143.2-201ENST00000609789 160 ntBASIC2.58□□□□□ -2
HLA-CQ95604 MIR6516-201ENST00000630554 81 ntBASIC2.58□□□□□ -2
HLA-CQ95604 MIR6733-201ENST00000635723 61 ntBASIC2.58□□□□□ -2
HLA-CQ95604 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.58□□□□□ -2
HLA-CQ95604 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.58□□□□□ -2
HLA-CQ95604 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-CQ95604 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.57□□□□□ -2
HLA-CQ95604 RNU6-161P-201ENST00000363051 106 ntBASIC2.57□□□□□ -2
HLA-CQ95604 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.57□□□□□ -2
HLA-CQ95604 RNU6-205P-201ENST00000390858 107 ntBASIC2.57□□□□□ -2
HLA-CQ95604 SNORD23.1-201ENST00000408212 104 ntBASIC2.57□□□□□ -2
HLA-CQ95604 HMGN2P35-201ENST00000412164 270 ntBASIC2.57□□□□□ -2
HLA-CQ95604 SNORA77B-201ENST00000578179 125 ntBASIC2.57□□□□□ -2
HLA-CQ95604 MIR4491-201ENST00000581087 68 ntBASIC2.57□□□□□ -2
HLA-CQ95604 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
HLA-CQ95604 SNORA25.3-201ENST00000363205 127 ntBASIC2.56□□□□□ -2
HLA-CQ95604 MIR520H-201ENST00000385126 88 ntBASIC2.56□□□□□ -2
HLA-CQ95604 RPS29P6-201ENST00000438196 145 ntBASIC2.56□□□□□ -2
HLA-CQ95604 MIR4498-201ENST00000577599 66 ntBASIC2.56□□□□□ -2
HLA-CQ95604 MIR8074-201ENST00000615081 81 ntBASIC2.56□□□□□ -2
HLA-CQ95604 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-CQ95604 Y_RNA.588-201ENST00000391254 102 ntBASIC2.55□□□□□ -2
HLA-CQ95604 SNORD63B-201ENST00000411005 70 ntBASIC2.55□□□□□ -2
HLA-CQ95604 AC244636.1-201ENST00000421152 228 ntBASIC2.55□□□□□ -2
HLA-CQ95604 SCARNA18B-201ENST00000458806 135 ntBASIC2.55□□□□□ -2
HLA-CQ95604 RNU6-531P-201ENST00000516694 104 ntBASIC2.55□□□□□ -2
HLA-CQ95604 MIR4781-201ENST00000585250 76 ntBASIC2.55□□□□□ -2
HLA-CQ95604 Y_RNA.788-201ENST00000622394 112 ntBASIC2.55□□□□□ -2
HLA-CQ95604 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
HLA-CQ95604 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HLA-CQ95604 RNA5SP264-201ENST00000363115 107 ntBASIC2.54□□□□□ -2
HLA-CQ95604 Y_RNA.118-201ENST00000363300 101 ntBASIC2.54□□□□□ -2
HLA-CQ95604 MIR518E-201ENST00000385252 88 ntBASIC2.54□□□□□ -2
HLA-CQ95604 snoU13.25-201ENST00000458945 104 ntBASIC2.54□□□□□ -2
HLA-CQ95604 RNU6-1108P-201ENST00000516308 104 ntBASIC2.54□□□□□ -2
HLA-CQ95604 Y_RNA.681-201ENST00000516445 113 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 231.9 ms