Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SNORD101-201ENST00000384027 73 ntBASIC2.58□□□□□ -2
HPS1Q92902 RNU6-851P-201ENST00000384565 107 ntBASIC2.58□□□□□ -2
HPS1Q92902 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.58□□□□□ -2
HPS1Q92902 SNORD100-201ENST00000408573 76 ntBASIC2.58□□□□□ -2
HPS1Q92902 AL606490.4-201ENST00000423117 127 ntBASIC2.58□□□□□ -2
HPS1Q92902 AC022018.1-201ENST00000430685 241 ntBASIC2.58□□□□□ -2
HPS1Q92902 RNU7-195P-201ENST00000458793 62 ntBASIC2.58□□□□□ -2
HPS1Q92902 TRAJ51-201ENST00000504127 63 ntBASIC2.58□□□□□ -2
HPS1Q92902 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.58□□□□□ -2
HPS1Q92902 RNU7-10P-201ENST00000607194 63 ntBASIC2.58□□□□□ -2
HPS1Q92902 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.58□□□□□ -2
HPS1Q92902 AL137790.1-201ENST00000634283 177 ntBASIC2.58□□□□□ -2
HPS1Q92902 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HPS1Q92902 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HPS1Q92902 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.57□□□□□ -2
HPS1Q92902 RNU6-824P-201ENST00000363724 104 ntBASIC2.57□□□□□ -2
HPS1Q92902 Y_RNA.536-201ENST00000384621 113 ntBASIC2.57□□□□□ -2
HPS1Q92902 SNORD67-201ENST00000390833 111 ntBASIC2.57□□□□□ -2
HPS1Q92902 U8.13-201ENST00000390842 128 ntBASIC2.57□□□□□ -2
HPS1Q92902 Y_RNA.588-201ENST00000391254 102 ntBASIC2.57□□□□□ -2
HPS1Q92902 RNA5SP181-201ENST00000410246 98 ntBASIC2.57□□□□□ -2
HPS1Q92902 RNU7-62P-201ENST00000458856 62 ntBASIC2.57□□□□□ -2
HPS1Q92902 MTRNR2L2-201ENST00000604882 87 ntBASIC2.57□□□□□ -2
HPS1Q92902 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.57□□□□□ -2
HPS1Q92902 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.57□□□□□ -2
HPS1Q92902 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
HPS1Q92902 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
HPS1Q92902 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HPS1Q92902 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HPS1Q92902 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.56□□□□□ -2
HPS1Q92902 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.56□□□□□ -2
HPS1Q92902 AL365361.1-201ENST00000566942 3481 ntBASIC2.56□□□□□ -2
HPS1Q92902 SNORA5B-201ENST00000363786 132 ntBASIC2.56□□□□□ -2
HPS1Q92902 SNORA40.6-201ENST00000391153 128 ntBASIC2.56□□□□□ -2
HPS1Q92902 AC092427.1-202ENST00000430569 476 ntBASIC2.56□□□□□ -2
HPS1Q92902 AL139132.1-201ENST00000431587 344 ntBASIC2.56□□□□□ -2
HPS1Q92902 UBE2DNL-203ENST00000474922 222 ntBASIC2.56□□□□□ -2
HPS1Q92902 RPL30P7-201ENST00000479312 323 ntBASIC2.56□□□□□ -2
HPS1Q92902 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.56□□□□□ -2
HPS1Q92902 GTF3AP2-201ENST00000557014 266 ntBASIC2.56□□□□□ -2
HPS1Q92902 DEFB122-202ENST00000569013 197 ntBASIC2.56□□□□□ -2
HPS1Q92902 MIR548H5-201ENST00000580314 60 ntBASIC2.56□□□□□ -2
HPS1Q92902 AC073325.2-201ENST00000339545 159 ntBASIC2.55□□□□□ -2
HPS1Q92902 RNU1-51P-201ENST00000365345 176 ntBASIC2.55□□□□□ -2
HPS1Q92902 MIR194-1-201ENST00000384892 85 ntBASIC2.55□□□□□ -2
HPS1Q92902 AC003982.1-202ENST00000469928 248 ntBASIC2.55□□□□□ -2
HPS1Q92902 Y_RNA.809-201ENST00000516058 95 ntBASIC2.55□□□□□ -2
HPS1Q92902 MIR2115-201ENST00000516657 100 ntBASIC2.55□□□□□ -2
HPS1Q92902 MIR3192-201ENST00000584920 77 ntBASIC2.55□□□□□ -2
HPS1Q92902 U1.36-201ENST00000620684 176 ntBASIC2.55□□□□□ -2
HPS1Q92902 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
HPS1Q92902 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.54□□□□□ -2
HPS1Q92902 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.54□□□□□ -2
HPS1Q92902 MIR6073-201ENST00000352083 89 ntBASIC2.54□□□□□ -2
HPS1Q92902 SNORA9.2-201ENST00000365361 133 ntBASIC2.54□□□□□ -2
HPS1Q92902 RNU6-203P-201ENST00000384038 104 ntBASIC2.54□□□□□ -2
HPS1Q92902 SNORA54-201ENST00000384281 123 ntBASIC2.54□□□□□ -2
HPS1Q92902 RNU6-604P-201ENST00000390917 100 ntBASIC2.54□□□□□ -2
HPS1Q92902 RNA5SP100-201ENST00000410903 110 ntBASIC2.54□□□□□ -2
HPS1Q92902 RNA5SP59-201ENST00000410922 110 ntBASIC2.54□□□□□ -2
HPS1Q92902 AC004965.1-201ENST00000413033 213 ntBASIC2.54□□□□□ -2
HPS1Q92902 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.54□□□□□ -2
HPS1Q92902 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.54□□□□□ -2
HPS1Q92902 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.54□□□□□ -2
HPS1Q92902 U6.100-201ENST00000636230 99 ntBASIC2.54□□□□□ -2
HPS1Q92902 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
HPS1Q92902 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HPS1Q92902 EEF1A1P41-201ENST00000414667 207 ntBASIC2.53□□□□□ -2
HPS1Q92902 SUMO1P4-201ENST00000429430 302 ntBASIC2.53□□□□□ -2
HPS1Q92902 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
HPS1Q92902 uc_338.6-201ENST00000613544 171 ntBASIC2.53□□□□□ -2
HPS1Q92902 AC007318.2-201ENST00000620999 243 ntBASIC2.53□□□□□ -2
HPS1Q92902 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HPS1Q92902 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
HPS1Q92902 MIR101-2-201ENST00000362195 79 ntBASIC2.52□□□□□ -2.01
HPS1Q92902 RNU6-829P-201ENST00000363700 112 ntBASIC2.52□□□□□ -2.01
HPS1Q92902 Y_RNA.236-201ENST00000364427 111 ntBASIC2.52□□□□□ -2.01
HPS1Q92902 MIR144-201ENST00000384886 86 ntBASIC2.52□□□□□ -2.01
HPS1Q92902 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HPS1Q92902 RNU6-752P-201ENST00000516376 102 ntBASIC2.52□□□□□ -2.01
HPS1Q92902 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
HPS1Q92902 MIR4298-201ENST00000584380 73 ntBASIC2.52□□□□□ -2.01
HPS1Q92902 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.52□□□□□ -2.01
HPS1Q92902 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.52□□□□□ -2.01
HPS1Q92902 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HPS1Q92902 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HPS1Q92902 MIR377-201ENST00000362145 69 ntBASIC2.51□□□□□ -2.01
HPS1Q92902 Y_RNA.56-201ENST00000362798 112 ntBASIC2.51□□□□□ -2.01
HPS1Q92902 SNORA25.3-201ENST00000363205 127 ntBASIC2.51□□□□□ -2.01
HPS1Q92902 SNORD41-201ENST00000386967 70 ntBASIC2.51□□□□□ -2.01
HPS1Q92902 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.51□□□□□ -2.01
HPS1Q92902 SNORD93-201ENST00000408813 74 ntBASIC2.51□□□□□ -2.01
HPS1Q92902 RNU6-935P-201ENST00000410371 100 ntBASIC2.51□□□□□ -2.01
HPS1Q92902 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.51□□□□□ -2.01
HPS1Q92902 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
HPS1Q92902 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.51□□□□□ -2.01
HPS1Q92902 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HPS1Q92902 RNU1-36P-201ENST00000365130 165 ntBASIC2.5□□□□□ -2.01
HPS1Q92902 RN7SL274P-201ENST00000492268 272 ntBASIC2.5□□□□□ -2.01
HPS1Q92902 RPL23AP94-201ENST00000512518 302 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms