Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MIR6844-201ENST00000637122 62 ntBASIC0.27□□□□□ -2.37
SHROOM3Q8TF72 RNU6-403P-201ENST00000363163 104 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 AC073261.1-201ENST00000429409 121 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 RNU4-54P-201ENST00000516428 129 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 SNORD67.1-201ENST00000516618 108 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 RNU6-1258P-201ENST00000516911 111 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 MRPS18CP4-201ENST00000535821 231 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 AC008608.1-201ENST00000603910 127 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.185-201ENST00000363894 100 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 RNY1P13-201ENST00000365030 105 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 MIR938-201ENST00000401216 83 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 AF228730.3-201ENST00000436691 102 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 RNU7-53P-201ENST00000516705 60 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 RNU6-861P-201ENST00000516745 106 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.697-201ENST00000516776 113 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 RNU7-35P-201ENST00000517174 62 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 RNU6-111P-201ENST00000517179 105 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 DNAJC19P2-201ENST00000593340 302 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 AC011603.4-201ENST00000611325 277 ntBASIC0.26□□□□□ -2.37
SHROOM3Q8TF72 SNORD12C-201ENST00000386307 89 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.584-201ENST00000391090 114 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 BX276092.1-201ENST00000427368 251 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 RNU6-893P-201ENST00000458841 100 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.644-201ENST00000459006 113 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 SNORA25.12-201ENST00000516202 82 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.674-201ENST00000516362 113 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 RNU6-1149P-201ENST00000516810 97 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 RNU2-60P-201ENST00000517290 128 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 AC072026.1-201ENST00000605023 201 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 uc_338.16-201ENST00000621804 95 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 AC021613.1-201ENST00000623880 111 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 MIR30D-201ENST00000362283 70 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 SNORA9.1-201ENST00000362412 131 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 RNU6-1292P-201ENST00000383856 107 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.430-201ENST00000384081 110 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.452-201ENST00000384202 108 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.562-201ENST00000384695 113 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 SNORD100-201ENST00000408573 76 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 MIR1270-201ENST00000459320 83 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 SNORA68.3-201ENST00000515906 83 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.662-201ENST00000516028 97 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 MIR3658-201ENST00000636291 56 ntBASIC0.25□□□□□ -2.37
SHROOM3Q8TF72 RNU6-1020P-201ENST00000363684 107 ntBASIC0.24□□□□□ -2.37
SHROOM3Q8TF72 RNU4-84P-201ENST00000364200 139 ntBASIC0.24□□□□□ -2.37
SHROOM3Q8TF72 RNU6-309P-201ENST00000364573 106 ntBASIC0.24□□□□□ -2.37
SHROOM3Q8TF72 RNU6-30P-201ENST00000384561 107 ntBASIC0.24□□□□□ -2.37
SHROOM3Q8TF72 RNU6-588P-201ENST00000410281 105 ntBASIC0.24□□□□□ -2.37
SHROOM3Q8TF72 RNU6-1219P-201ENST00000516143 112 ntBASIC0.24□□□□□ -2.37
SHROOM3Q8TF72 RNU2-35P-201ENST00000516446 142 ntBASIC0.24□□□□□ -2.37
SHROOM3Q8TF72 RNA5SP33-201ENST00000516687 98 ntBASIC0.24□□□□□ -2.37
SHROOM3Q8TF72 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.24□□□□□ -2.37
SHROOM3Q8TF72 MIR5190-201ENST00000581537 80 ntBASIC0.24□□□□□ -2.37
SHROOM3Q8TF72 AP001180.6-201ENST00000584918 159 ntBASIC0.24□□□□□ -2.37
SHROOM3Q8TF72 RNU6-508P-201ENST00000363231 103 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.188-201ENST00000363952 111 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.297-201ENST00000364950 91 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.531-201ENST00000384589 121 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 MIRLET7F2-201ENST00000385277 83 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-447P-201ENST00000410293 104 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-1118P-201ENST00000410382 104 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-1076P-201ENST00000410397 104 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-355P-201ENST00000410427 104 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-791P-201ENST00000410467 104 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-705P-201ENST00000410601 104 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-1100P-201ENST00000410691 104 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-860P-201ENST00000410860 104 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-1217P-201ENST00000411276 104 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 SNORD71-201ENST00000411292 86 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-785P-201ENST00000411324 104 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 SNRPGP12-201ENST00000449481 213 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU7-123P-201ENST00000515911 60 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-240P-201ENST00000516098 97 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-469P-201ENST00000516253 101 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 MIR3646-201ENST00000578301 84 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.757-201ENST00000578934 114 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 MIR4503-201ENST00000582187 83 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 U6.90-201ENST00000614007 104 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 U6.70-201ENST00000620287 104 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU4-58P-201ENST00000363192 141 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNA5SP133-201ENST00000363368 119 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-275P-201ENST00000364910 107 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 SNORA72.6-201ENST00000384520 129 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-679P-201ENST00000391003 106 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNA5SP144-201ENST00000410846 116 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 RNU6-1135P-201ENST00000411083 103 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.793-201ENST00000411222 111 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 SCARNA15-202ENST00000516881 127 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 MIR3612-201ENST00000579753 87 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 AC105081.1-201ENST00000617727 106 ntBASIC0.23□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.366-201ENST00000365540 102 ntBASIC0.22□□□□□ -2.37
SHROOM3Q8TF72 SNORD18B-201ENST00000365659 72 ntBASIC0.22□□□□□ -2.37
SHROOM3Q8TF72 Y_RNA.435-201ENST00000384095 112 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 194.5 ms