Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RNU6-154P-201ENST00000384306 106 ntBASIC2.57□□□□□ -2
NEDD1Q8NHV4 AC244023.1-201ENST00000426884 112 ntBASIC2.57□□□□□ -2
NEDD1Q8NHV4 RNU7-26P-201ENST00000458980 63 ntBASIC2.57□□□□□ -2
NEDD1Q8NHV4 AC242498.1-201ENST00000604134 111 ntBASIC2.57□□□□□ -2
NEDD1Q8NHV4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.57□□□□□ -2
NEDD1Q8NHV4 U6.109-201ENST00000636749 87 ntBASIC2.57□□□□□ -2
NEDD1Q8NHV4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
NEDD1Q8NHV4 SNORA64-201ENST00000384674 134 ntBASIC2.56□□□□□ -2
NEDD1Q8NHV4 SNORD38B-201ENST00000384690 67 ntBASIC2.56□□□□□ -2
NEDD1Q8NHV4 MIR597-201ENST00000384968 97 ntBASIC2.56□□□□□ -2
NEDD1Q8NHV4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.56□□□□□ -2
NEDD1Q8NHV4 RNU6-630P-201ENST00000391258 106 ntBASIC2.56□□□□□ -2
NEDD1Q8NHV4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.56□□□□□ -2
NEDD1Q8NHV4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.56□□□□□ -2
NEDD1Q8NHV4 RNA5SP237-201ENST00000410414 113 ntBASIC2.56□□□□□ -2
NEDD1Q8NHV4 RNU2-7P-201ENST00000410794 178 ntBASIC2.56□□□□□ -2
NEDD1Q8NHV4 RNU7-106P-201ENST00000459514 67 ntBASIC2.56□□□□□ -2
NEDD1Q8NHV4 RNU7-43P-201ENST00000516554 64 ntBASIC2.56□□□□□ -2
NEDD1Q8NHV4 RNA5SP402-201ENST00000517148 110 ntBASIC2.56□□□□□ -2
NEDD1Q8NHV4 MIR5194-201ENST00000582634 120 ntBASIC2.56□□□□□ -2
NEDD1Q8NHV4 SNORD38B-202ENST00000625943 69 ntBASIC2.56□□□□□ -2
NEDD1Q8NHV4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NEDD1Q8NHV4 AP000648.3-201ENST00000623539 4507 ntBASIC2.55□□□□□ -2
NEDD1Q8NHV4 Y_RNA.119-201ENST00000363301 96 ntBASIC2.55□□□□□ -2
NEDD1Q8NHV4 RNU6-291P-201ENST00000384720 107 ntBASIC2.55□□□□□ -2
NEDD1Q8NHV4 MIR518E-201ENST00000385252 88 ntBASIC2.55□□□□□ -2
NEDD1Q8NHV4 SNORA48.3-201ENST00000391081 134 ntBASIC2.55□□□□□ -2
NEDD1Q8NHV4 RNU6-1254P-201ENST00000391266 104 ntBASIC2.55□□□□□ -2
NEDD1Q8NHV4 AC092628.1-201ENST00000436250 252 ntBASIC2.55□□□□□ -2
NEDD1Q8NHV4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.55□□□□□ -2
NEDD1Q8NHV4 RNVU1-2-201ENST00000516326 135 ntBASIC2.55□□□□□ -2
NEDD1Q8NHV4 SNORD92-201ENST00000585078 85 ntBASIC2.55□□□□□ -2
NEDD1Q8NHV4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NEDD1Q8NHV4 MIR337-201ENST00000362281 93 ntBASIC2.54□□□□□ -2
NEDD1Q8NHV4 RNU6-957P-201ENST00000363652 99 ntBASIC2.54□□□□□ -2
NEDD1Q8NHV4 RNU6-205P-201ENST00000390858 107 ntBASIC2.54□□□□□ -2
NEDD1Q8NHV4 AL023284.1-201ENST00000403956 276 ntBASIC2.54□□□□□ -2
NEDD1Q8NHV4 AC244636.1-201ENST00000421152 228 ntBASIC2.54□□□□□ -2
NEDD1Q8NHV4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.54□□□□□ -2
NEDD1Q8NHV4 MIR6132-201ENST00000622083 109 ntBASIC2.54□□□□□ -2
NEDD1Q8NHV4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.54□□□□□ -2
NEDD1Q8NHV4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
NEDD1Q8NHV4 SNORA67.3-201ENST00000384366 140 ntBASIC2.53□□□□□ -2
NEDD1Q8NHV4 MIR548U-201ENST00000390728 81 ntBASIC2.53□□□□□ -2
NEDD1Q8NHV4 HMGN2P39-201ENST00000398005 273 ntBASIC2.53□□□□□ -2
NEDD1Q8NHV4 RNU6-237P-201ENST00000515985 71 ntBASIC2.53□□□□□ -2
NEDD1Q8NHV4 AL357312.1-201ENST00000603879 298 ntBASIC2.53□□□□□ -2
NEDD1Q8NHV4 MIR7843-201ENST00000622274 79 ntBASIC2.53□□□□□ -2
NEDD1Q8NHV4 MIR219B-201ENST00000637023 88 ntBASIC2.53□□□□□ -2
NEDD1Q8NHV4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
NEDD1Q8NHV4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NEDD1Q8NHV4 RNU6-340P-201ENST00000364005 107 ntBASIC2.52□□□□□ -2.01
NEDD1Q8NHV4 Y_RNA.443-201ENST00000384135 111 ntBASIC2.52□□□□□ -2.01
NEDD1Q8NHV4 RNU1-52P-201ENST00000384190 164 ntBASIC2.52□□□□□ -2.01
NEDD1Q8NHV4 SNORD45A-201ENST00000384512 84 ntBASIC2.52□□□□□ -2.01
NEDD1Q8NHV4 MIR563-201ENST00000385080 79 ntBASIC2.52□□□□□ -2.01
NEDD1Q8NHV4 snoU13.2-201ENST00000459201 104 ntBASIC2.52□□□□□ -2.01
NEDD1Q8NHV4 snoU13.15-201ENST00000459407 104 ntBASIC2.52□□□□□ -2.01
NEDD1Q8NHV4 RNU7-41P-201ENST00000515917 61 ntBASIC2.52□□□□□ -2.01
NEDD1Q8NHV4 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
NEDD1Q8NHV4 AL137847.3-201ENST00000611521 109 ntBASIC2.52□□□□□ -2.01
NEDD1Q8NHV4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.52□□□□□ -2.01
NEDD1Q8NHV4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
NEDD1Q8NHV4 SNORA25.4-201ENST00000363666 124 ntBASIC2.51□□□□□ -2.01
NEDD1Q8NHV4 SNORD116-24-201ENST00000384549 92 ntBASIC2.51□□□□□ -2.01
NEDD1Q8NHV4 MIR633-201ENST00000384821 98 ntBASIC2.51□□□□□ -2.01
NEDD1Q8NHV4 MIR520C-201ENST00000385005 87 ntBASIC2.51□□□□□ -2.01
NEDD1Q8NHV4 MIR504-201ENST00000385065 83 ntBASIC2.51□□□□□ -2.01
NEDD1Q8NHV4 RNU6-243P-201ENST00000391140 107 ntBASIC2.51□□□□□ -2.01
NEDD1Q8NHV4 MIR1283-2-201ENST00000408621 87 ntBASIC2.51□□□□□ -2.01
NEDD1Q8NHV4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.51□□□□□ -2.01
NEDD1Q8NHV4 AC121758.2-201ENST00000553271 193 ntBASIC2.51□□□□□ -2.01
NEDD1Q8NHV4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
NEDD1Q8NHV4 MIR4251-201ENST00000635819 61 ntBASIC2.51□□□□□ -2.01
NEDD1Q8NHV4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.5□□□□□ -2.01
NEDD1Q8NHV4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
NEDD1Q8NHV4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
NEDD1Q8NHV4 MIR424-201ENST00000362227 98 ntBASIC2.5□□□□□ -2.01
NEDD1Q8NHV4 Y_RNA.42-201ENST00000362660 108 ntBASIC2.5□□□□□ -2.01
NEDD1Q8NHV4 RNU6-681P-201ENST00000364012 104 ntBASIC2.5□□□□□ -2.01
NEDD1Q8NHV4 AC079150.2-201ENST00000443733 78 ntBASIC2.5□□□□□ -2.01
NEDD1Q8NHV4 AC245517.4-201ENST00000448601 281 ntBASIC2.5□□□□□ -2.01
NEDD1Q8NHV4 RNA5SP82-201ENST00000516707 92 ntBASIC2.5□□□□□ -2.01
NEDD1Q8NHV4 AC026271.5-201ENST00000577873 130 ntBASIC2.5□□□□□ -2.01
NEDD1Q8NHV4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.5□□□□□ -2.01
NEDD1Q8NHV4 AP006437.1-201ENST00000641440 3685 ntBASIC2.49□□□□□ -2.01
NEDD1Q8NHV4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NEDD1Q8NHV4 Y_RNA.207-201ENST00000364142 106 ntBASIC2.49□□□□□ -2.01
NEDD1Q8NHV4 RNU6-1051P-201ENST00000365471 102 ntBASIC2.49□□□□□ -2.01
NEDD1Q8NHV4 Y_RNA.371-201ENST00000365591 113 ntBASIC2.49□□□□□ -2.01
NEDD1Q8NHV4 MIR29C-201ENST00000385231 88 ntBASIC2.49□□□□□ -2.01
NEDD1Q8NHV4 RNU6-466P-201ENST00000391224 103 ntBASIC2.49□□□□□ -2.01
NEDD1Q8NHV4 AC009474.2-201ENST00000451383 136 ntBASIC2.49□□□□□ -2.01
NEDD1Q8NHV4 SUB1P4-201ENST00000566062 339 ntBASIC2.49□□□□□ -2.01
NEDD1Q8NHV4 MIR4709-201ENST00000577272 72 ntBASIC2.49□□□□□ -2.01
NEDD1Q8NHV4 MIR4524B-201ENST00000581569 115 ntBASIC2.49□□□□□ -2.01
NEDD1Q8NHV4 MIR4658-201ENST00000584344 65 ntBASIC2.49□□□□□ -2.01
NEDD1Q8NHV4 PRELID3BP2-201ENST00000605362 201 ntBASIC2.49□□□□□ -2.01
NEDD1Q8NHV4 ZNF209P-201ENST00000593450 2304 ntBASIC2.49□□□□□ -2.01
NEDD1Q8NHV4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 333.7 ms