Protein–RNA interactions for Protein: Q8NEL0

CCDC54, Coiled-coil domain-containing protein 54, humanhuman

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54Q8NEL0 AC023932.2-201ENST00000603176 175 ntBASIC0.03□□□□□ -2.4
CCDC54Q8NEL0 AL360085.1-201ENST00000604713 532 ntBASIC0.03□□□□□ -2.4
CCDC54Q8NEL0 U6.109-201ENST00000636749 87 ntBASIC0.03□□□□□ -2.4
CCDC54Q8NEL0 Y_RNA.75-201ENST00000362927 97 ntBASIC0.02□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.288-201ENST00000364854 92 ntBASIC0.02□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.459-201ENST00000384251 102 ntBASIC0.02□□□□□ -2.41
CCDC54Q8NEL0 MIR548H3-201ENST00000408771 118 ntBASIC0.02□□□□□ -2.41
CCDC54Q8NEL0 RNU7-70P-201ENST00000516941 66 ntBASIC0.02□□□□□ -2.41
CCDC54Q8NEL0 MIR3128-201ENST00000581957 66 ntBASIC0.02□□□□□ -2.41
CCDC54Q8NEL0 AC104408.1-201ENST00000605241 170 ntBASIC0.02□□□□□ -2.41
CCDC54Q8NEL0 U6.104-201ENST00000637979 90 ntBASIC0.02□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.60-201ENST00000362831 98 ntBASIC0.01□□□□□ -2.41
CCDC54Q8NEL0 RNU4-67P-201ENST00000364569 141 ntBASIC0.01□□□□□ -2.41
CCDC54Q8NEL0 RNY1P2-201ENST00000364820 117 ntBASIC0.01□□□□□ -2.41
CCDC54Q8NEL0 RNU6-1307P-201ENST00000391012 103 ntBASIC0.01□□□□□ -2.41
CCDC54Q8NEL0 RNU7-113P-201ENST00000459273 62 ntBASIC0.01□□□□□ -2.41
CCDC54Q8NEL0 RNA5SP436-201ENST00000516020 115 ntBASIC0.01□□□□□ -2.41
CCDC54Q8NEL0 RNA5SP33-201ENST00000516687 98 ntBASIC0.01□□□□□ -2.41
CCDC54Q8NEL0 AC091304.10-201ENST00000641554 121 ntBASIC0.01□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.149-201ENST00000363558 117 ntBASIC0□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.508-201ENST00000384502 114 ntBASIC0□□□□□ -2.41
CCDC54Q8NEL0 RNU6-111P-201ENST00000517179 105 ntBASIC0□□□□□ -2.41
CCDC54Q8NEL0 RNU7-161P-201ENST00000517289 62 ntBASIC0□□□□□ -2.41
CCDC54Q8NEL0 RN7SL793P-201ENST00000583259 296 ntBASIC0□□□□□ -2.41
CCDC54Q8NEL0 AC105081.1-201ENST00000617727 106 ntBASIC0□□□□□ -2.41
CCDC54Q8NEL0 RNU6-694P-201ENST00000364071 147 ntBASIC-0.01□□□□□ -2.41
CCDC54Q8NEL0 SNORA25.7-201ENST00000364375 127 ntBASIC-0.01□□□□□ -2.41
CCDC54Q8NEL0 RNU6-726P-201ENST00000364680 107 ntBASIC-0.01□□□□□ -2.41
CCDC54Q8NEL0 RNU6-716P-201ENST00000365621 103 ntBASIC-0.01□□□□□ -2.41
CCDC54Q8NEL0 RNU4-70P-201ENST00000384579 139 ntBASIC-0.01□□□□□ -2.41
CCDC54Q8NEL0 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.01□□□□□ -2.41
CCDC54Q8NEL0 MIR4768-201ENST00000585270 74 ntBASIC-0.01□□□□□ -2.41
CCDC54Q8NEL0 MIR499B-201ENST00000636498 73 ntBASIC-0.01□□□□□ -2.41
CCDC54Q8NEL0 SNORA9.1-201ENST00000362412 131 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 SNORD114-5-201ENST00000362928 70 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 MIR760-201ENST00000390220 80 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 AC244505.6-201ENST00000452829 130 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 RNU6-135P-201ENST00000516769 101 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 AC022559.1-201ENST00000520905 205 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 MIR4514-201ENST00000581410 57 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 MIR4305-201ENST00000583252 102 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 SNORA70.25-201ENST00000612741 95 ntBASIC-0.02□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 RNU4-58P-201ENST00000363192 141 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 RNA5SP128-201ENST00000365305 116 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 MIR193B-201ENST00000384907 83 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 MIR643-201ENST00000385267 97 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 AL022718.1-201ENST00000412004 84 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 RNU6-893P-201ENST00000458841 100 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 RPL39P34-201ENST00000477141 156 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 RNU6-240P-201ENST00000516098 97 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 DEFB131E-201ENST00000532329 154 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
CCDC54Q8NEL0 MIR411-201ENST00000362239 96 ntBASIC-0.04□□□□□ -2.42
CCDC54Q8NEL0 RNU6-161P-201ENST00000363051 106 ntBASIC-0.04□□□□□ -2.42
CCDC54Q8NEL0 SNORA63-201ENST00000363450 132 ntBASIC-0.04□□□□□ -2.42
CCDC54Q8NEL0 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.04□□□□□ -2.42
CCDC54Q8NEL0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.04□□□□□ -2.42
CCDC54Q8NEL0 MIR4667-201ENST00000578933 66 ntBASIC-0.04□□□□□ -2.42
CCDC54Q8NEL0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.04□□□□□ -2.42
CCDC54Q8NEL0 AL162376.1-201ENST00000624117 175 ntBASIC-0.04□□□□□ -2.42
CCDC54Q8NEL0 SNORD115-24-201ENST00000363528 82 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 RNA5SP403-201ENST00000363598 108 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 RNU6-690P-201ENST00000365242 106 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 RNU6-756P-201ENST00000383997 107 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 MIR613-201ENST00000385248 95 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 MIR501-201ENST00000390204 84 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 RNU7-123P-201ENST00000515911 60 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 RNU6-848P-201ENST00000515948 107 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 RNU6-617P-201ENST00000516147 107 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 RNU6-473P-201ENST00000516164 107 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 AC062037.2-201ENST00000610137 73 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 MIR3658-201ENST00000636291 56 ntBASIC-0.05□□□□□ -2.42
CCDC54Q8NEL0 MIR330-201ENST00000362196 94 ntBASIC-0.06□□□□□ -2.42
CCDC54Q8NEL0 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.06□□□□□ -2.42
CCDC54Q8NEL0 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
CCDC54Q8NEL0 SNORD114-10-201ENST00000363409 72 ntBASIC-0.06□□□□□ -2.42
CCDC54Q8NEL0 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.06□□□□□ -2.42
CCDC54Q8NEL0 RNU6-574P-201ENST00000384265 107 ntBASIC-0.06□□□□□ -2.42
CCDC54Q8NEL0 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.06□□□□□ -2.42
CCDC54Q8NEL0 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.06□□□□□ -2.42
CCDC54Q8NEL0 RNY1P4-201ENST00000384595 115 ntBASIC-0.06□□□□□ -2.42
CCDC54Q8NEL0 RNU6-588P-201ENST00000410281 105 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms