Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 AC087499.7-201ENST00000441958 109 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 snoU13.26-201ENST00000459452 105 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 PDCD5P2-201ENST00000507570 312 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 RNU6-521P-201ENST00000516663 105 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 RNU7-156P-201ENST00000517214 74 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 MIR4491-201ENST00000581087 68 ntBASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.18□□□□□ -2.22
CLRN3Q8NCR9 RNU6-1290P-201ENST00000362957 109 ntBASIC1.17□□□□□ -2.22
CLRN3Q8NCR9 Y_RNA.155-201ENST00000363632 101 ntBASIC1.17□□□□□ -2.22
CLRN3Q8NCR9 RNU1-119P-201ENST00000391122 165 ntBASIC1.17□□□□□ -2.22
CLRN3Q8NCR9 SNORA40.18-201ENST00000391200 128 ntBASIC1.17□□□□□ -2.22
CLRN3Q8NCR9 SNORA26.9-201ENST00000391322 122 ntBASIC1.17□□□□□ -2.22
CLRN3Q8NCR9 AC096949.1-201ENST00000412047 152 ntBASIC1.17□□□□□ -2.22
CLRN3Q8NCR9 RNA5SP255-201ENST00000516370 107 ntBASIC1.17□□□□□ -2.22
CLRN3Q8NCR9 RNU6-295P-201ENST00000516901 104 ntBASIC1.17□□□□□ -2.22
CLRN3Q8NCR9 SNORD92-201ENST00000585078 85 ntBASIC1.17□□□□□ -2.22
CLRN3Q8NCR9 MIR502-201ENST00000606349 86 ntBASIC1.17□□□□□ -2.22
CLRN3Q8NCR9 MIR6129-201ENST00000616087 109 ntBASIC1.17□□□□□ -2.22
CLRN3Q8NCR9 AP001362.1-201ENST00000625165 124 ntBASIC1.17□□□□□ -2.22
CLRN3Q8NCR9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 RNU6-403P-201ENST00000363163 104 ntBASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 RNA5SP133-201ENST00000363368 119 ntBASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 Y_RNA.328-201ENST00000365208 113 ntBASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 SNORA72.6-201ENST00000384520 129 ntBASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 Y_RNA.549-201ENST00000384657 102 ntBASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 U8.13-201ENST00000390842 128 ntBASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 Y_RNA.588-201ENST00000391254 102 ntBASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 RNU6-765P-201ENST00000516916 99 ntBASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 MIR4661-201ENST00000582720 75 ntBASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 RMST_2.1-201ENST00000617263 136 ntBASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 U6.109-201ENST00000636749 87 ntBASIC1.16□□□□□ -2.22
CLRN3Q8NCR9 RNU4-58P-201ENST00000363192 141 ntBASIC1.15□□□□□ -2.23
CLRN3Q8NCR9 SNORD105-201ENST00000386910 85 ntBASIC1.15□□□□□ -2.23
CLRN3Q8NCR9 SNORA7.5-201ENST00000410672 110 ntBASIC1.15□□□□□ -2.23
CLRN3Q8NCR9 RNU6-733P-201ENST00000410759 104 ntBASIC1.15□□□□□ -2.23
CLRN3Q8NCR9 RNU6-1194P-201ENST00000516208 104 ntBASIC1.15□□□□□ -2.23
CLRN3Q8NCR9 RNU6-1018P-201ENST00000516577 106 ntBASIC1.15□□□□□ -2.23
CLRN3Q8NCR9 AC068339.1-201ENST00000526965 141 ntBASIC1.15□□□□□ -2.23
CLRN3Q8NCR9 DEFB131E-201ENST00000532329 154 ntBASIC1.15□□□□□ -2.23
CLRN3Q8NCR9 AC138749.4-201ENST00000563970 127 ntBASIC1.15□□□□□ -2.23
CLRN3Q8NCR9 MIR6082-201ENST00000613604 109 ntBASIC1.15□□□□□ -2.23
CLRN3Q8NCR9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CLRN3Q8NCR9 MIR758-201ENST00000390227 88 ntBASIC1.14□□□□□ -2.23
CLRN3Q8NCR9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CLRN3Q8NCR9 RNU7-56P-201ENST00000458744 62 ntBASIC1.14□□□□□ -2.23
CLRN3Q8NCR9 UBL5P1-201ENST00000507979 193 ntBASIC1.14□□□□□ -2.23
CLRN3Q8NCR9 MIR4255-201ENST00000579351 72 ntBASIC1.14□□□□□ -2.23
CLRN3Q8NCR9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.14□□□□□ -2.23
CLRN3Q8NCR9 AL359821.1-201ENST00000605519 182 ntBASIC1.14□□□□□ -2.23
CLRN3Q8NCR9 AC084768.2-201ENST00000622736 221 ntBASIC1.14□□□□□ -2.23
CLRN3Q8NCR9 Y_RNA.42-201ENST00000362660 108 ntBASIC1.13□□□□□ -2.23
CLRN3Q8NCR9 SNORD38.2-201ENST00000384470 69 ntBASIC1.13□□□□□ -2.23
CLRN3Q8NCR9 SNORA25.15-201ENST00000516487 89 ntBASIC1.13□□□□□ -2.23
CLRN3Q8NCR9 MIR8066-201ENST00000617280 78 ntBASIC1.13□□□□□ -2.23
CLRN3Q8NCR9 AL512310.12-203ENST00000640543 90 ntBASIC1.13□□□□□ -2.23
CLRN3Q8NCR9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
CLRN3Q8NCR9 Y_RNA.13-201ENST00000362403 112 ntBASIC1.12□□□□□ -2.23
CLRN3Q8NCR9 RNU6-1313P-201ENST00000362622 102 ntBASIC1.12□□□□□ -2.23
CLRN3Q8NCR9 RNU6-1107P-201ENST00000364817 104 ntBASIC1.12□□□□□ -2.23
CLRN3Q8NCR9 RNU6-1325P-201ENST00000364905 105 ntBASIC1.12□□□□□ -2.23
CLRN3Q8NCR9 Y_RNA.323-201ENST00000365157 109 ntBASIC1.12□□□□□ -2.23
CLRN3Q8NCR9 RNU6-429P-201ENST00000384582 108 ntBASIC1.12□□□□□ -2.23
CLRN3Q8NCR9 MIR504-201ENST00000385065 83 ntBASIC1.12□□□□□ -2.23
CLRN3Q8NCR9 MIR520H-201ENST00000385126 88 ntBASIC1.12□□□□□ -2.23
CLRN3Q8NCR9 MIR1261-201ENST00000408659 82 ntBASIC1.12□□□□□ -2.23
CLRN3Q8NCR9 RNU7-102P-201ENST00000458948 62 ntBASIC1.12□□□□□ -2.23
CLRN3Q8NCR9 RNU6-589P-201ENST00000516485 107 ntBASIC1.12□□□□□ -2.23
CLRN3Q8NCR9 AP003327.1-201ENST00000529684 127 ntBASIC1.12□□□□□ -2.23
CLRN3Q8NCR9 AC068338.1-201ENST00000565567 176 ntBASIC1.12□□□□□ -2.23
CLRN3Q8NCR9 MIR5009-201ENST00000578736 100 ntBASIC1.12□□□□□ -2.23
CLRN3Q8NCR9 Y_RNA.119-201ENST00000363301 96 ntBASIC1.11□□□□□ -2.23
CLRN3Q8NCR9 U8.6-201ENST00000364939 135 ntBASIC1.11□□□□□ -2.23
CLRN3Q8NCR9 RNU6-1307P-201ENST00000391012 103 ntBASIC1.11□□□□□ -2.23
CLRN3Q8NCR9 SNORA11.2-201ENST00000408318 127 ntBASIC1.11□□□□□ -2.23
CLRN3Q8NCR9 SNORA25.16-201ENST00000516741 121 ntBASIC1.11□□□□□ -2.23
CLRN3Q8NCR9 BX248123.2-201ENST00000606318 124 ntBASIC1.11□□□□□ -2.23
CLRN3Q8NCR9 MIR6845-201ENST00000613182 61 ntBASIC1.11□□□□□ -2.23
CLRN3Q8NCR9 MIR376B-201ENST00000614515 100 ntBASIC1.11□□□□□ -2.23
CLRN3Q8NCR9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.11□□□□□ -2.23
CLRN3Q8NCR9 RNU6-679P-201ENST00000391003 106 ntBASIC1.1□□□□□ -2.23
CLRN3Q8NCR9 Y_RNA.709-201ENST00000516952 92 ntBASIC1.1□□□□□ -2.23
CLRN3Q8NCR9 RNU6-548P-201ENST00000517083 115 ntBASIC1.1□□□□□ -2.23
CLRN3Q8NCR9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.1□□□□□ -2.23
CLRN3Q8NCR9 Y_RNA.360-201ENST00000365512 102 ntBASIC1.09□□□□□ -2.23
CLRN3Q8NCR9 MIR34C-201ENST00000384831 77 ntBASIC1.09□□□□□ -2.23
CLRN3Q8NCR9 SNORA67.5-201ENST00000391036 107 ntBASIC1.09□□□□□ -2.23
CLRN3Q8NCR9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.09□□□□□ -2.23
CLRN3Q8NCR9 AC004941.2-201ENST00000427009 228 ntBASIC1.09□□□□□ -2.23
CLRN3Q8NCR9 AC108729.3-201ENST00000513484 108 ntBASIC1.09□□□□□ -2.23
CLRN3Q8NCR9 AC090897.1-201ENST00000580909 226 ntBASIC1.09□□□□□ -2.23
CLRN3Q8NCR9 AL157834.3-201ENST00000615543 103 ntBASIC1.09□□□□□ -2.23
CLRN3Q8NCR9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
CLRN3Q8NCR9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CLRN3Q8NCR9 RNU6-1014P-201ENST00000383940 103 ntBASIC1.08□□□□□ -2.24
CLRN3Q8NCR9 MIR517C-201ENST00000385103 95 ntBASIC1.08□□□□□ -2.24
CLRN3Q8NCR9 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
CLRN3Q8NCR9 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms