Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SNORD44.1-201ENST00000363202 61 ntBASIC0.25□□□□□ -2.37
C9orf40Q8IXQ3 SNORD118-201ENST00000363593 134 ntBASIC0.25□□□□□ -2.37
C9orf40Q8IXQ3 SNORD115-20-201ENST00000365099 82 ntBASIC0.25□□□□□ -2.37
C9orf40Q8IXQ3 Y_RNA.536-201ENST00000384621 113 ntBASIC0.25□□□□□ -2.37
C9orf40Q8IXQ3 MTATP6P21-201ENST00000440681 189 ntBASIC0.25□□□□□ -2.37
C9orf40Q8IXQ3 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
C9orf40Q8IXQ3 SNORA31.14-201ENST00000516728 116 ntBASIC0.25□□□□□ -2.37
C9orf40Q8IXQ3 Y_RNA.697-201ENST00000516776 113 ntBASIC0.25□□□□□ -2.37
C9orf40Q8IXQ3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.25□□□□□ -2.37
C9orf40Q8IXQ3 AC011603.4-201ENST00000611325 277 ntBASIC0.25□□□□□ -2.37
C9orf40Q8IXQ3 Y_RNA.120-201ENST00000363304 110 ntBASIC0.24□□□□□ -2.37
C9orf40Q8IXQ3 SNORA36.1-201ENST00000363424 132 ntBASIC0.24□□□□□ -2.37
C9orf40Q8IXQ3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
C9orf40Q8IXQ3 Y_RNA.357-201ENST00000365487 109 ntBASIC0.24□□□□□ -2.37
C9orf40Q8IXQ3 Y_RNA.497-201ENST00000384447 98 ntBASIC0.24□□□□□ -2.37
C9orf40Q8IXQ3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.24□□□□□ -2.37
C9orf40Q8IXQ3 RNU6-291P-201ENST00000384720 107 ntBASIC0.24□□□□□ -2.37
C9orf40Q8IXQ3 RNU6-535P-201ENST00000384722 107 ntBASIC0.24□□□□□ -2.37
C9orf40Q8IXQ3 DEFB131E-201ENST00000532329 154 ntBASIC0.24□□□□□ -2.37
C9orf40Q8IXQ3 MTND5P34-201ENST00000568888 325 ntBASIC0.24□□□□□ -2.37
C9orf40Q8IXQ3 MIR3646-201ENST00000578301 84 ntBASIC0.24□□□□□ -2.37
C9orf40Q8IXQ3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.24□□□□□ -2.37
C9orf40Q8IXQ3 Y_RNA.297-201ENST00000364950 91 ntBASIC0.23□□□□□ -2.37
C9orf40Q8IXQ3 SNORA32-201ENST00000384072 121 ntBASIC0.23□□□□□ -2.37
C9orf40Q8IXQ3 RNY1P4-201ENST00000384595 115 ntBASIC0.23□□□□□ -2.37
C9orf40Q8IXQ3 RNU6-239P-201ENST00000390990 99 ntBASIC0.23□□□□□ -2.37
C9orf40Q8IXQ3 RNU6-588P-201ENST00000410281 105 ntBASIC0.23□□□□□ -2.37
C9orf40Q8IXQ3 Y_RNA.793-201ENST00000411222 111 ntBASIC0.23□□□□□ -2.37
C9orf40Q8IXQ3 SNRPGP12-201ENST00000449481 213 ntBASIC0.23□□□□□ -2.37
C9orf40Q8IXQ3 Y_RNA.644-201ENST00000459006 113 ntBASIC0.23□□□□□ -2.37
C9orf40Q8IXQ3 Y_RNA.674-201ENST00000516362 113 ntBASIC0.23□□□□□ -2.37
C9orf40Q8IXQ3 RNU6-135P-201ENST00000516769 101 ntBASIC0.23□□□□□ -2.37
C9orf40Q8IXQ3 MIR4305-201ENST00000583252 102 ntBASIC0.23□□□□□ -2.37
C9orf40Q8IXQ3 AC072026.1-201ENST00000605023 201 ntBASIC0.23□□□□□ -2.37
C9orf40Q8IXQ3 Y_RNA.531-201ENST00000384589 121 ntBASIC0.22□□□□□ -2.37
C9orf40Q8IXQ3 MIR613-201ENST00000385248 95 ntBASIC0.22□□□□□ -2.37
C9orf40Q8IXQ3 RNU6-240P-201ENST00000516098 97 ntBASIC0.22□□□□□ -2.37
C9orf40Q8IXQ3 RNA5SP268-201ENST00000516828 124 ntBASIC0.22□□□□□ -2.37
C9orf40Q8IXQ3 AC138907.4-201ENST00000570107 226 ntBASIC0.22□□□□□ -2.37
C9orf40Q8IXQ3 MIR548AE2-201ENST00000583456 67 ntBASIC0.22□□□□□ -2.37
C9orf40Q8IXQ3 AC141273.2-201ENST00000618989 130 ntBASIC0.22□□□□□ -2.37
C9orf40Q8IXQ3 AC010487.4-201ENST00000637027 61 ntBASIC0.22□□□□□ -2.37
C9orf40Q8IXQ3 RNU4-58P-201ENST00000363192 141 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 RNA5SP133-201ENST00000363368 119 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 Y_RNA.188-201ENST00000363952 111 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 RNU4-84P-201ENST00000364200 139 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 RNU6-1229P-201ENST00000364295 107 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 SNORD37.2-201ENST00000391075 66 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 RNU6-1194P-201ENST00000516208 104 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 RNU2-35P-201ENST00000516446 142 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 RNU6-531P-201ENST00000516694 104 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 RNU6-1271P-201ENST00000517049 105 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 AP002392.1-201ENST00000537692 208 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 AC021443.1-201ENST00000604478 211 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 U6.109-201ENST00000636749 87 ntBASIC0.21□□□□□ -2.38
C9orf40Q8IXQ3 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
C9orf40Q8IXQ3 SNORD18B-201ENST00000365659 72 ntBASIC0.2□□□□□ -2.38
C9orf40Q8IXQ3 SUMO1P3-201ENST00000439961 304 ntBASIC0.2□□□□□ -2.38
C9orf40Q8IXQ3 RNU6-863P-201ENST00000515989 104 ntBASIC0.2□□□□□ -2.38
C9orf40Q8IXQ3 SNORD67.1-201ENST00000516618 108 ntBASIC0.2□□□□□ -2.38
C9orf40Q8IXQ3 RNU2-60P-201ENST00000517290 128 ntBASIC0.2□□□□□ -2.38
C9orf40Q8IXQ3 AC078938.1-201ENST00000620993 318 ntBASIC0.2□□□□□ -2.38
C9orf40Q8IXQ3 RNU6-1318P-201ENST00000365389 103 ntBASIC0.19□□□□□ -2.38
C9orf40Q8IXQ3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
C9orf40Q8IXQ3 RNU7-164P-201ENST00000459221 62 ntBASIC0.19□□□□□ -2.38
C9orf40Q8IXQ3 RNU7-121P-201ENST00000516604 62 ntBASIC0.19□□□□□ -2.38
C9orf40Q8IXQ3 RNU7-137P-201ENST00000516788 62 ntBASIC0.19□□□□□ -2.38
C9orf40Q8IXQ3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.19□□□□□ -2.38
C9orf40Q8IXQ3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.19□□□□□ -2.38
C9orf40Q8IXQ3 DNAJC19P2-201ENST00000593340 302 ntBASIC0.19□□□□□ -2.38
C9orf40Q8IXQ3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.19□□□□□ -2.38
C9orf40Q8IXQ3 MIR3658-201ENST00000636291 56 ntBASIC0.19□□□□□ -2.38
C9orf40Q8IXQ3 MIR101-2-201ENST00000362195 79 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 SNORD114-10-201ENST00000363409 72 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 RNU6-1099P-201ENST00000363533 107 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 RNU6-379P-201ENST00000363813 104 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 Y_RNA.401-201ENST00000383965 117 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 SNORD28-201ENST00000384706 75 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 MIRLET7F2-201ENST00000385277 83 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 Y_RNA.584-201ENST00000391090 114 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 RNU2-59P-201ENST00000410482 191 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 RNA5SP227-201ENST00000516184 113 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 RNA5SP47-201ENST00000517230 109 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 AC138749.4-201ENST00000563970 127 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 MIR4639-201ENST00000584938 69 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 AL359881.1-201ENST00000602916 267 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 AC098479.1-201ENST00000609225 154 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 MIR6828-201ENST00000636181 60 ntBASIC0.18□□□□□ -2.38
C9orf40Q8IXQ3 Y_RNA.240-201ENST00000364469 95 ntBASIC0.17□□□□□ -2.38
C9orf40Q8IXQ3 Y_RNA.366-201ENST00000365540 102 ntBASIC0.17□□□□□ -2.38
C9orf40Q8IXQ3 Y_RNA.552-201ENST00000384665 112 ntBASIC0.17□□□□□ -2.38
C9orf40Q8IXQ3 AC073261.1-201ENST00000429409 121 ntBASIC0.17□□□□□ -2.38
C9orf40Q8IXQ3 RNU7-123P-201ENST00000515911 60 ntBASIC0.17□□□□□ -2.38
C9orf40Q8IXQ3 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.17□□□□□ -2.38
C9orf40Q8IXQ3 MIR7107-201ENST00000611489 80 ntBASIC0.17□□□□□ -2.38
C9orf40Q8IXQ3 AC105081.1-201ENST00000617727 106 ntBASIC0.17□□□□□ -2.38
C9orf40Q8IXQ3 MIR924-201ENST00000638017 53 ntBASIC0.17□□□□□ -2.38
C9orf40Q8IXQ3 AC091304.10-201ENST00000641554 121 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms