Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 Y_RNA.173-201ENST00000363776 113 ntBASIC1.61□□□□□ -2.15
VRK3Q8IV63 RNU6-979P-201ENST00000383896 107 ntBASIC1.61□□□□□ -2.15
VRK3Q8IV63 MIR513A1-201ENST00000385138 129 ntBASIC1.61□□□□□ -2.15
VRK3Q8IV63 MIR1302-7-201ENST00000408841 72 ntBASIC1.61□□□□□ -2.15
VRK3Q8IV63 RPL39P39-201ENST00000455840 151 ntBASIC1.61□□□□□ -2.15
VRK3Q8IV63 HMGN2P23-201ENST00000456759 269 ntBASIC1.61□□□□□ -2.15
VRK3Q8IV63 AC141846.1-201ENST00000568348 142 ntBASIC1.61□□□□□ -2.15
VRK3Q8IV63 MIR3192-201ENST00000584920 77 ntBASIC1.61□□□□□ -2.15
VRK3Q8IV63 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.61□□□□□ -2.15
VRK3Q8IV63 AL773524.1-201ENST00000614065 229 ntBASIC1.61□□□□□ -2.15
VRK3Q8IV63 RNA5SP276-201ENST00000362580 94 ntBASIC1.6□□□□□ -2.15
VRK3Q8IV63 RNA5SP48-201ENST00000363969 126 ntBASIC1.6□□□□□ -2.15
VRK3Q8IV63 RNU6-865P-201ENST00000364772 107 ntBASIC1.6□□□□□ -2.15
VRK3Q8IV63 MIR548G-201ENST00000408442 89 ntBASIC1.6□□□□□ -2.15
VRK3Q8IV63 AL603825.1-201ENST00000438481 80 ntBASIC1.6□□□□□ -2.15
VRK3Q8IV63 RPS29P28-201ENST00000446439 141 ntBASIC1.6□□□□□ -2.15
VRK3Q8IV63 RNU7-48P-201ENST00000458875 63 ntBASIC1.6□□□□□ -2.15
VRK3Q8IV63 RNA5SP458-201ENST00000516188 119 ntBASIC1.6□□□□□ -2.15
VRK3Q8IV63 RNU6-267P-201ENST00000516714 103 ntBASIC1.6□□□□□ -2.15
VRK3Q8IV63 MIR4255-201ENST00000579351 72 ntBASIC1.6□□□□□ -2.15
VRK3Q8IV63 MIR5588-201ENST00000581890 63 ntBASIC1.6□□□□□ -2.15
VRK3Q8IV63 MIR4668-201ENST00000582284 70 ntBASIC1.6□□□□□ -2.15
VRK3Q8IV63 AP000942.3-201ENST00000603702 160 ntBASIC1.6□□□□□ -2.15
VRK3Q8IV63 AC103810.7-201ENST00000607821 91 ntBASIC1.6□□□□□ -2.15
VRK3Q8IV63 RNU6-228P-201ENST00000362700 106 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 Y_RNA.73-201ENST00000362910 113 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 RNA5SP190-201ENST00000365222 118 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 RNU6-1276P-201ENST00000365372 104 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 RNU6-787P-201ENST00000384032 107 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 RNU6-439P-201ENST00000384188 106 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 Y_RNA.567-201ENST00000384736 106 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 MIR563-201ENST00000385080 79 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
VRK3Q8IV63 snoU13.2-201ENST00000459201 104 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 SNORD13-201ENST00000459299 104 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 RNU7-171P-201ENST00000459581 62 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 RNA5SP445-201ENST00000515889 115 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 AP003716.2-201ENST00000528260 108 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.59□□□□□ -2.15
VRK3Q8IV63 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 RNU6-90P-201ENST00000606352 106 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 AL096861.1-201ENST00000610899 123 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 AC105081.1-201ENST00000617727 106 ntBASIC1.59□□□□□ -2.15
VRK3Q8IV63 RNA5SP259-201ENST00000365541 109 ntBASIC1.58□□□□□ -2.16
VRK3Q8IV63 snoU13.25-201ENST00000458945 104 ntBASIC1.58□□□□□ -2.16
VRK3Q8IV63 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.58□□□□□ -2.16
VRK3Q8IV63 AL662814.1-201ENST00000617364 121 ntBASIC1.58□□□□□ -2.16
VRK3Q8IV63 MIR3202-2-201ENST00000635980 79 ntBASIC1.58□□□□□ -2.16
VRK3Q8IV63 WWP1P1-201ENST00000466609 2769 ntBASIC1.57□□□□□ -2.16
VRK3Q8IV63 HSBP1P2-201ENST00000299671 229 ntBASIC1.57□□□□□ -2.16
VRK3Q8IV63 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
VRK3Q8IV63 RNU6-949P-201ENST00000384040 107 ntBASIC1.57□□□□□ -2.16
VRK3Q8IV63 RNU6-1124P-201ENST00000384169 107 ntBASIC1.57□□□□□ -2.16
VRK3Q8IV63 RNU6-242P-201ENST00000384359 107 ntBASIC1.57□□□□□ -2.16
VRK3Q8IV63 AC244636.1-201ENST00000421152 228 ntBASIC1.57□□□□□ -2.16
VRK3Q8IV63 SNORD111.1-201ENST00000516421 86 ntBASIC1.57□□□□□ -2.16
VRK3Q8IV63 MIR4666B-201ENST00000578142 81 ntBASIC1.57□□□□□ -2.16
VRK3Q8IV63 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.57□□□□□ -2.16
VRK3Q8IV63 AP001362.1-201ENST00000625165 124 ntBASIC1.57□□□□□ -2.16
VRK3Q8IV63 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.57□□□□□ -2.16
VRK3Q8IV63 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
VRK3Q8IV63 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.57□□□□□ -2.16
VRK3Q8IV63 RNY1P2-201ENST00000364820 117 ntBASIC1.56□□□□□ -2.16
VRK3Q8IV63 RNU6-1237P-201ENST00000384777 107 ntBASIC1.56□□□□□ -2.16
VRK3Q8IV63 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
VRK3Q8IV63 RNU6-613P-201ENST00000410412 108 ntBASIC1.56□□□□□ -2.16
VRK3Q8IV63 RNU6-922P-201ENST00000516753 99 ntBASIC1.56□□□□□ -2.16
VRK3Q8IV63 MIR4299-201ENST00000577899 72 ntBASIC1.56□□□□□ -2.16
VRK3Q8IV63 AL357312.1-201ENST00000603879 298 ntBASIC1.56□□□□□ -2.16
VRK3Q8IV63 GHRLOS.1-201ENST00000610995 70 ntBASIC1.56□□□□□ -2.16
VRK3Q8IV63 AC012676.2-201ENST00000619258 186 ntBASIC1.56□□□□□ -2.16
VRK3Q8IV63 RNU6-633P-201ENST00000362612 103 ntBASIC1.55□□□□□ -2.16
VRK3Q8IV63 RNU1-17P-201ENST00000363022 152 ntBASIC1.55□□□□□ -2.16
VRK3Q8IV63 SNORD38.2-201ENST00000384470 69 ntBASIC1.55□□□□□ -2.16
VRK3Q8IV63 RNY1P4-201ENST00000384595 115 ntBASIC1.55□□□□□ -2.16
VRK3Q8IV63 MIR588-201ENST00000384900 83 ntBASIC1.55□□□□□ -2.16
VRK3Q8IV63 RNA5SP237-201ENST00000410414 113 ntBASIC1.55□□□□□ -2.16
VRK3Q8IV63 SPINT5P-201ENST00000448174 155 ntBASIC1.55□□□□□ -2.16
VRK3Q8IV63 HSPE1P24-201ENST00000450782 238 ntBASIC1.55□□□□□ -2.16
VRK3Q8IV63 RNU1-98P-201ENST00000458992 160 ntBASIC1.55□□□□□ -2.16
VRK3Q8IV63 MIR4713-201ENST00000582691 75 ntBASIC1.55□□□□□ -2.16
VRK3Q8IV63 AC020891.4-201ENST00000605745 93 ntBASIC1.55□□□□□ -2.16
VRK3Q8IV63 AC025521.1-201ENST00000621624 286 ntBASIC1.55□□□□□ -2.16
VRK3Q8IV63 MIR302D-201ENST00000362275 68 ntBASIC1.54□□□□□ -2.16
VRK3Q8IV63 RNU6-396P-201ENST00000365369 105 ntBASIC1.54□□□□□ -2.16
VRK3Q8IV63 SNORA2B-201ENST00000384583 137 ntBASIC1.54□□□□□ -2.16
VRK3Q8IV63 MT-TN-201ENST00000387400 73 ntBASIC1.54□□□□□ -2.16
VRK3Q8IV63 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
VRK3Q8IV63 MIR1323-201ENST00000408090 73 ntBASIC1.54□□□□□ -2.16
VRK3Q8IV63 MIR8074-201ENST00000615081 81 ntBASIC1.54□□□□□ -2.16
VRK3Q8IV63 MIR30D-201ENST00000362283 70 ntBASIC1.53□□□□□ -2.16
VRK3Q8IV63 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
VRK3Q8IV63 SNORA17.3-201ENST00000391159 129 ntBASIC1.53□□□□□ -2.16
VRK3Q8IV63 MIR1255A-201ENST00000408338 113 ntBASIC1.53□□□□□ -2.16
VRK3Q8IV63 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.53□□□□□ -2.16
VRK3Q8IV63 AL161932.1-201ENST00000437408 146 ntBASIC1.53□□□□□ -2.16
VRK3Q8IV63 AL133373.1-201ENST00000497098 94 ntBASIC1.53□□□□□ -2.16
VRK3Q8IV63 AL513043.2-201ENST00000573941 143 ntBASIC1.53□□□□□ -2.16
VRK3Q8IV63 MIR4264-201ENST00000583520 66 ntBASIC1.53□□□□□ -2.16
VRK3Q8IV63 AC103810.8-201ENST00000607347 118 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 220.7 ms