Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RNU6-380P-201ENST00000410207 107 ntBASIC2.56□□□□□ -2
RNF135Q8IUD6 SNRPGP12-201ENST00000449481 213 ntBASIC2.56□□□□□ -2
RNF135Q8IUD6 RPL23AP42-201ENST00000471152 471 ntBASIC2.56□□□□□ -2
RNF135Q8IUD6 MIR4796-201ENST00000580742 81 ntBASIC2.56□□□□□ -2
RNF135Q8IUD6 AL357312.1-201ENST00000603879 298 ntBASIC2.56□□□□□ -2
RNF135Q8IUD6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
RNF135Q8IUD6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.56□□□□□ -2
RNF135Q8IUD6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RNF135Q8IUD6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RNF135Q8IUD6 RNY1P2-201ENST00000364820 117 ntBASIC2.55□□□□□ -2
RNF135Q8IUD6 MIR144-201ENST00000384886 86 ntBASIC2.55□□□□□ -2
RNF135Q8IUD6 SNORA40.18-201ENST00000391200 128 ntBASIC2.55□□□□□ -2
RNF135Q8IUD6 AC027119.1-201ENST00000440877 241 ntBASIC2.55□□□□□ -2
RNF135Q8IUD6 RNA5SP445-201ENST00000515889 115 ntBASIC2.55□□□□□ -2
RNF135Q8IUD6 MIR3192-201ENST00000584920 77 ntBASIC2.55□□□□□ -2
RNF135Q8IUD6 AC046143.2-201ENST00000609789 160 ntBASIC2.55□□□□□ -2
RNF135Q8IUD6 AL773524.1-201ENST00000614065 229 ntBASIC2.55□□□□□ -2
RNF135Q8IUD6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
RNF135Q8IUD6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RNF135Q8IUD6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
RNF135Q8IUD6 MIR1287-201ENST00000408492 90 ntBASIC2.54□□□□□ -2
RNF135Q8IUD6 Y_RNA.648-201ENST00000459455 110 ntBASIC2.54□□□□□ -2
RNF135Q8IUD6 AC015688.6-201ENST00000577737 104 ntBASIC2.54□□□□□ -2
RNF135Q8IUD6 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.54□□□□□ -2
RNF135Q8IUD6 MIR6895-201ENST00000613497 78 ntBASIC2.54□□□□□ -2
RNF135Q8IUD6 AL662814.1-201ENST00000617364 121 ntBASIC2.54□□□□□ -2
RNF135Q8IUD6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.54□□□□□ -2
RNF135Q8IUD6 RNU6-161P-201ENST00000363051 106 ntBASIC2.53□□□□□ -2
RNF135Q8IUD6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.53□□□□□ -2
RNF135Q8IUD6 RPS27P21-201ENST00000486977 252 ntBASIC2.53□□□□□ -2
RNF135Q8IUD6 RNU6-871P-201ENST00000516122 100 ntBASIC2.53□□□□□ -2
RNF135Q8IUD6 RNU6-1108P-201ENST00000516308 104 ntBASIC2.53□□□□□ -2
RNF135Q8IUD6 RNA5SP82-201ENST00000516707 92 ntBASIC2.53□□□□□ -2
RNF135Q8IUD6 AP000942.3-201ENST00000603702 160 ntBASIC2.53□□□□□ -2
RNF135Q8IUD6 PRELID3BP2-201ENST00000605362 201 ntBASIC2.53□□□□□ -2
RNF135Q8IUD6 MIR6873-201ENST00000622788 63 ntBASIC2.53□□□□□ -2
RNF135Q8IUD6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RNF135Q8IUD6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RNF135Q8IUD6 AC244023.1-201ENST00000426884 112 ntBASIC2.52□□□□□ -2.01
RNF135Q8IUD6 AC125388.1-201ENST00000459631 156 ntBASIC2.52□□□□□ -2.01
RNF135Q8IUD6 FGF7P7-201ENST00000514120 227 ntBASIC2.52□□□□□ -2.01
RNF135Q8IUD6 RNU6-850P-201ENST00000516934 103 ntBASIC2.52□□□□□ -2.01
RNF135Q8IUD6 RNU6-1015P-201ENST00000517121 99 ntBASIC2.52□□□□□ -2.01
RNF135Q8IUD6 SNORA77B-201ENST00000578179 125 ntBASIC2.52□□□□□ -2.01
RNF135Q8IUD6 AC242498.1-201ENST00000604134 111 ntBASIC2.52□□□□□ -2.01
RNF135Q8IUD6 AL096861.1-201ENST00000610899 123 ntBASIC2.52□□□□□ -2.01
RNF135Q8IUD6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
RNF135Q8IUD6 WWP1P1-201ENST00000466609 2769 ntBASIC2.51□□□□□ -2.01
RNF135Q8IUD6 Y_RNA.340-201ENST00000365330 92 ntBASIC2.51□□□□□ -2.01
RNF135Q8IUD6 DEFA7P-201ENST00000382676 285 ntBASIC2.51□□□□□ -2.01
RNF135Q8IUD6 RNU6-949P-201ENST00000384040 107 ntBASIC2.51□□□□□ -2.01
RNF135Q8IUD6 Y_RNA.660-201ENST00000516002 120 ntBASIC2.51□□□□□ -2.01
RNF135Q8IUD6 SNORA31.11-201ENST00000516528 139 ntBASIC2.51□□□□□ -2.01
RNF135Q8IUD6 RNU6-250P-201ENST00000516958 103 ntBASIC2.51□□□□□ -2.01
RNF135Q8IUD6 MIR4500-201ENST00000579472 76 ntBASIC2.51□□□□□ -2.01
RNF135Q8IUD6 MIR8063-201ENST00000621930 81 ntBASIC2.51□□□□□ -2.01
RNF135Q8IUD6 RNU6-811P-201ENST00000384069 107 ntBASIC2.5□□□□□ -2.01
RNF135Q8IUD6 Y_RNA.532-201ENST00000384590 113 ntBASIC2.5□□□□□ -2.01
RNF135Q8IUD6 RNA5SP292-201ENST00000390974 118 ntBASIC2.5□□□□□ -2.01
RNF135Q8IUD6 HSPE1P24-201ENST00000450782 238 ntBASIC2.5□□□□□ -2.01
RNF135Q8IUD6 snoU13.2-201ENST00000459201 104 ntBASIC2.5□□□□□ -2.01
RNF135Q8IUD6 AC138749.4-201ENST00000563970 127 ntBASIC2.5□□□□□ -2.01
RNF135Q8IUD6 MIR4299-201ENST00000577899 72 ntBASIC2.5□□□□□ -2.01
RNF135Q8IUD6 MIR4713-201ENST00000582691 75 ntBASIC2.5□□□□□ -2.01
RNF135Q8IUD6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.5□□□□□ -2.01
RNF135Q8IUD6 MIR5092-201ENST00000583139 88 ntBASIC2.5□□□□□ -2.01
RNF135Q8IUD6 AC067747.1-201ENST00000608026 250 ntBASIC2.5□□□□□ -2.01
RNF135Q8IUD6 GHRLOS.1-201ENST00000610995 70 ntBASIC2.5□□□□□ -2.01
RNF135Q8IUD6 MIR8074-201ENST00000615081 81 ntBASIC2.5□□□□□ -2.01
RNF135Q8IUD6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
RNF135Q8IUD6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
RNF135Q8IUD6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RNF135Q8IUD6 SNORA25.9-201ENST00000365087 128 ntBASIC2.49□□□□□ -2.01
RNF135Q8IUD6 MIR1302-7-201ENST00000408841 72 ntBASIC2.49□□□□□ -2.01
RNF135Q8IUD6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.49□□□□□ -2.01
RNF135Q8IUD6 AC005908.1-201ENST00000468701 347 ntBASIC2.49□□□□□ -2.01
RNF135Q8IUD6 RNU6-1053P-201ENST00000515930 101 ntBASIC2.49□□□□□ -2.01
RNF135Q8IUD6 RNU6-448P-201ENST00000517052 107 ntBASIC2.49□□□□□ -2.01
RNF135Q8IUD6 MIR5694-201ENST00000581190 76 ntBASIC2.49□□□□□ -2.01
RNF135Q8IUD6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.49□□□□□ -2.01
RNF135Q8IUD6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
RNF135Q8IUD6 RNU6-396P-201ENST00000365369 105 ntBASIC2.48□□□□□ -2.01
RNF135Q8IUD6 RNU6-571P-201ENST00000384128 107 ntBASIC2.48□□□□□ -2.01
RNF135Q8IUD6 SNORA72.6-201ENST00000384520 129 ntBASIC2.48□□□□□ -2.01
RNF135Q8IUD6 MIR588-201ENST00000384900 83 ntBASIC2.48□□□□□ -2.01
RNF135Q8IUD6 MIR4498-201ENST00000577599 66 ntBASIC2.48□□□□□ -2.01
RNF135Q8IUD6 MIR4484-201ENST00000582855 83 ntBASIC2.48□□□□□ -2.01
RNF135Q8IUD6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RNF135Q8IUD6 AC008163.1-202ENST00000636004 2889 ntBASIC2.47□□□□□ -2.01
RNF135Q8IUD6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RNF135Q8IUD6 MIR635-201ENST00000384830 98 ntBASIC2.47□□□□□ -2.01
RNF135Q8IUD6 RNA5SP181-201ENST00000410246 98 ntBASIC2.47□□□□□ -2.01
RNF135Q8IUD6 BX276092.1-201ENST00000427368 251 ntBASIC2.47□□□□□ -2.01
RNF135Q8IUD6 AC023790.1-201ENST00000482174 347 ntBASIC2.47□□□□□ -2.01
RNF135Q8IUD6 AC026436.1-201ENST00000510537 270 ntBASIC2.47□□□□□ -2.01
RNF135Q8IUD6 RNU6-947P-201ENST00000516264 106 ntBASIC2.47□□□□□ -2.01
RNF135Q8IUD6 MIR4781-201ENST00000585250 76 ntBASIC2.47□□□□□ -2.01
RNF135Q8IUD6 U6.109-201ENST00000636749 87 ntBASIC2.47□□□□□ -2.01
RNF135Q8IUD6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RNF135Q8IUD6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 810.4 ms