Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC245047.7-201ENST00000440265 293 ntBASIC1.99□□□□□ -2.09
USP48Q86UV5 UBL5P1-201ENST00000507979 193 ntBASIC1.99□□□□□ -2.09
USP48Q86UV5 RNU6-165P-201ENST00000517170 99 ntBASIC1.99□□□□□ -2.09
USP48Q86UV5 RNU7-35P-201ENST00000517174 62 ntBASIC1.99□□□□□ -2.09
USP48Q86UV5 SNORD53B-201ENST00000577887 78 ntBASIC1.99□□□□□ -2.09
USP48Q86UV5 MALAT1.1-201ENST00000618249 95 ntBASIC1.99□□□□□ -2.09
USP48Q86UV5 AC091304.10-201ENST00000641554 121 ntBASIC1.99□□□□□ -2.09
USP48Q86UV5 SNORA25.3-201ENST00000363205 127 ntBASIC1.98□□□□□ -2.09
USP48Q86UV5 Y_RNA.191-201ENST00000363972 113 ntBASIC1.98□□□□□ -2.09
USP48Q86UV5 Y_RNA.388-201ENST00000383919 113 ntBASIC1.98□□□□□ -2.09
USP48Q86UV5 MIR1302-7-201ENST00000408841 72 ntBASIC1.98□□□□□ -2.09
USP48Q86UV5 RPL31P63-201ENST00000422565 375 ntBASIC1.98□□□□□ -2.09
USP48Q86UV5 RNU6-970P-201ENST00000516312 107 ntBASIC1.98□□□□□ -2.09
USP48Q86UV5 RNU6-795P-201ENST00000516323 103 ntBASIC1.98□□□□□ -2.09
USP48Q86UV5 RN7SKP88-201ENST00000516847 250 ntBASIC1.98□□□□□ -2.09
USP48Q86UV5 RNU6-762P-201ENST00000517107 102 ntBASIC1.98□□□□□ -2.09
USP48Q86UV5 MIR4452-201ENST00000583004 71 ntBASIC1.98□□□□□ -2.09
USP48Q86UV5 7SK.8-201ENST00000612110 250 ntBASIC1.98□□□□□ -2.09
USP48Q86UV5 7SK.11-201ENST00000615477 250 ntBASIC1.98□□□□□ -2.09
USP48Q86UV5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.98□□□□□ -2.09
USP48Q86UV5 7SK.13-201ENST00000622040 250 ntBASIC1.98□□□□□ -2.09
USP48Q86UV5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
USP48Q86UV5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
USP48Q86UV5 RNU6-170P-201ENST00000362832 104 ntBASIC1.97□□□□□ -2.09
USP48Q86UV5 SNORA7.1-201ENST00000363750 139 ntBASIC1.97□□□□□ -2.09
USP48Q86UV5 RNU4-36P-201ENST00000364294 144 ntBASIC1.97□□□□□ -2.09
USP48Q86UV5 SNORD115-35-201ENST00000365122 82 ntBASIC1.97□□□□□ -2.09
USP48Q86UV5 RNU6-1201P-201ENST00000384227 107 ntBASIC1.97□□□□□ -2.09
USP48Q86UV5 SNORA18-201ENST00000384416 132 ntBASIC1.97□□□□□ -2.09
USP48Q86UV5 SNORD38B-201ENST00000384690 67 ntBASIC1.97□□□□□ -2.09
USP48Q86UV5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.97□□□□□ -2.09
USP48Q86UV5 AC244023.1-201ENST00000426884 112 ntBASIC1.97□□□□□ -2.09
USP48Q86UV5 RNU6-1018P-201ENST00000516577 106 ntBASIC1.97□□□□□ -2.09
USP48Q86UV5 RNU6-844P-201ENST00000517175 102 ntBASIC1.97□□□□□ -2.09
USP48Q86UV5 MIR4777-201ENST00000583710 86 ntBASIC1.97□□□□□ -2.09
USP48Q86UV5 AC242498.1-201ENST00000604134 111 ntBASIC1.97□□□□□ -2.09
USP48Q86UV5 SNORD38B-202ENST00000625943 69 ntBASIC1.97□□□□□ -2.09
USP48Q86UV5 Y_RNA.107-201ENST00000363190 121 ntBASIC1.96□□□□□ -2.1
USP48Q86UV5 Y_RNA.247-201ENST00000364500 92 ntBASIC1.96□□□□□ -2.1
USP48Q86UV5 Y_RNA.377-201ENST00000365644 108 ntBASIC1.96□□□□□ -2.1
USP48Q86UV5 RNU6-42P-201ENST00000384165 107 ntBASIC1.96□□□□□ -2.1
USP48Q86UV5 SNORD77B-201ENST00000391112 67 ntBASIC1.96□□□□□ -2.1
USP48Q86UV5 MIR4285-201ENST00000581001 85 ntBASIC1.96□□□□□ -2.1
USP48Q86UV5 FAM71BP1-201ENST00000604431 523 ntBASIC1.96□□□□□ -2.1
USP48Q86UV5 PRELID3BP2-201ENST00000605362 201 ntBASIC1.96□□□□□ -2.1
USP48Q86UV5 AL442128.1-201ENST00000615151 90 ntBASIC1.96□□□□□ -2.1
USP48Q86UV5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
USP48Q86UV5 MIR103A2-201ENST00000362154 78 ntBASIC1.95□□□□□ -2.1
USP48Q86UV5 RNU6-1313P-201ENST00000362622 102 ntBASIC1.95□□□□□ -2.1
USP48Q86UV5 RNA5SP264-201ENST00000363115 107 ntBASIC1.95□□□□□ -2.1
USP48Q86UV5 RNU6-396P-201ENST00000365369 105 ntBASIC1.95□□□□□ -2.1
USP48Q86UV5 RNU6-644P-201ENST00000391155 98 ntBASIC1.95□□□□□ -2.1
USP48Q86UV5 AC096949.1-201ENST00000412047 152 ntBASIC1.95□□□□□ -2.1
USP48Q86UV5 RNU6-1006P-201ENST00000516998 103 ntBASIC1.95□□□□□ -2.1
USP48Q86UV5 AP003716.2-201ENST00000528260 108 ntBASIC1.95□□□□□ -2.1
USP48Q86UV5 MIR2052-201ENST00000636055 55 ntBASIC1.95□□□□□ -2.1
USP48Q86UV5 Y_RNA.290-201ENST00000364879 114 ntBASIC1.94□□□□□ -2.1
USP48Q86UV5 MIR206-201ENST00000384872 86 ntBASIC1.94□□□□□ -2.1
USP48Q86UV5 AC004941.2-201ENST00000427009 228 ntBASIC1.94□□□□□ -2.1
USP48Q86UV5 RNU7-79P-201ENST00000516082 62 ntBASIC1.94□□□□□ -2.1
USP48Q86UV5 RNA5SP102-201ENST00000516865 106 ntBASIC1.94□□□□□ -2.1
USP48Q86UV5 RNU11-2P-201ENST00000516898 142 ntBASIC1.94□□□□□ -2.1
USP48Q86UV5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.94□□□□□ -2.1
USP48Q86UV5 Y_RNA.540-201ENST00000384638 111 ntBASIC1.93□□□□□ -2.1
USP48Q86UV5 MIR1302-4-201ENST00000408701 150 ntBASIC1.93□□□□□ -2.1
USP48Q86UV5 RNY4P29-201ENST00000410801 97 ntBASIC1.93□□□□□ -2.1
USP48Q86UV5 RNU1-123P-201ENST00000458950 160 ntBASIC1.93□□□□□ -2.1
USP48Q86UV5 RNU7-61P-201ENST00000515897 61 ntBASIC1.93□□□□□ -2.1
USP48Q86UV5 RNU7-2P-201ENST00000516096 62 ntBASIC1.93□□□□□ -2.1
USP48Q86UV5 MIR2115-201ENST00000516657 100 ntBASIC1.93□□□□□ -2.1
USP48Q86UV5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.93□□□□□ -2.1
USP48Q86UV5 RMST_2.1-201ENST00000617263 136 ntBASIC1.93□□□□□ -2.1
USP48Q86UV5 SNORA67.6-201ENST00000391093 99 ntBASIC1.92□□□□□ -2.1
USP48Q86UV5 RNU6-1054P-201ENST00000411293 104 ntBASIC1.92□□□□□ -2.1
USP48Q86UV5 SNORD67.1-201ENST00000516618 108 ntBASIC1.92□□□□□ -2.1
USP48Q86UV5 AL078603.1-201ENST00000603824 313 ntBASIC1.92□□□□□ -2.1
USP48Q86UV5 AL157834.3-201ENST00000615543 103 ntBASIC1.92□□□□□ -2.1
USP48Q86UV5 Y_RNA.220-201ENST00000364244 109 ntBASIC1.91□□□□□ -2.1
USP48Q86UV5 SNORD114-22-201ENST00000365423 72 ntBASIC1.91□□□□□ -2.1
USP48Q86UV5 SNORA26.2-201ENST00000390922 122 ntBASIC1.91□□□□□ -2.1
USP48Q86UV5 MIR1185-1-201ENST00000408598 86 ntBASIC1.91□□□□□ -2.1
USP48Q86UV5 RNU1-92P-201ENST00000517017 135 ntBASIC1.91□□□□□ -2.1
USP48Q86UV5 AC062037.1-201ENST00000605302 128 ntBASIC1.91□□□□□ -2.1
USP48Q86UV5 MIR6734-201ENST00000621166 68 ntBASIC1.91□□□□□ -2.1
USP48Q86UV5 ZNF209P-201ENST00000593450 2304 ntBASIC1.9□□□□□ -2.1
USP48Q86UV5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
USP48Q86UV5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
USP48Q86UV5 Y_RNA.10-201ENST00000362371 110 ntBASIC1.9□□□□□ -2.11
USP48Q86UV5 RNY1P13-201ENST00000365030 105 ntBASIC1.9□□□□□ -2.11
USP48Q86UV5 Y_RNA.467-201ENST00000384297 102 ntBASIC1.9□□□□□ -2.11
USP48Q86UV5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.9□□□□□ -2.11
USP48Q86UV5 RNU6-1086P-201ENST00000410930 100 ntBASIC1.9□□□□□ -2.11
USP48Q86UV5 MRPL35P3-201ENST00000421557 364 ntBASIC1.9□□□□□ -2.11
USP48Q86UV5 RNU7-137P-201ENST00000516788 62 ntBASIC1.9□□□□□ -2.11
USP48Q86UV5 MIR4421-201ENST00000578133 69 ntBASIC1.9□□□□□ -2.11
USP48Q86UV5 AP000753.3-201ENST00000604083 169 ntBASIC1.9□□□□□ -2.11
USP48Q86UV5 AL161722.3-201ENST00000605789 2983 ntBASIC1.89□□□□□ -2.11
USP48Q86UV5 Y_RNA.95-201ENST00000363079 95 ntBASIC1.89□□□□□ -2.11
USP48Q86UV5 RNU6-573P-201ENST00000383938 106 ntBASIC1.89□□□□□ -2.11
USP48Q86UV5 Y_RNA.558-201ENST00000384685 113 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms