Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNU6-626P-201ENST00000363354 107 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 RNU6-553P-201ENST00000364047 96 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 RNU6-144P-201ENST00000383951 107 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 RNU6-95P-201ENST00000384697 107 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 RPS3AP52-201ENST00000435639 297 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 RNU6-261P-201ENST00000459506 102 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 SNORD77.4-201ENST00000516158 81 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 MIR4490-201ENST00000582647 84 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 RNU6-20P-201ENST00000384106 107 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 RNA5SP144-201ENST00000410846 116 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 MTCO2P19-201ENST00000427513 598 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 RNU6-397P-201ENST00000516226 104 ntBASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.29□□□□□ -2.62
CSPG4Q6UVK1 SNORD27-201ENST00000363981 72 ntBASIC-1.3□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.3□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.682-201ENST00000516457 100 ntBASIC-1.3□□□□□ -2.62
CSPG4Q6UVK1 RNU7-70P-201ENST00000516941 66 ntBASIC-1.3□□□□□ -2.62
CSPG4Q6UVK1 AC090617.8-201ENST00000623339 167 ntBASIC-1.3□□□□□ -2.62
CSPG4Q6UVK1 MIR6874-201ENST00000635894 71 ntBASIC-1.3□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 RNU6-38P-201ENST00000384085 107 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 SNORD78.2-201ENST00000391076 69 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 RNU6-466P-201ENST00000391224 103 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 AL161932.1-201ENST00000437408 146 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 MTND3P16-201ENST00000452205 344 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 RN7SKP295-201ENST00000517264 153 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 AC009779.6-201ENST00000603972 165 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 RNA5SP26-201ENST00000362406 119 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 RNU6-157P-201ENST00000383957 107 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 SNORA69.1-201ENST00000390904 137 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 RNU6-720P-201ENST00000516363 108 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 RNU6-850P-201ENST00000516934 103 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 AP003461.1-201ENST00000528866 78 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 MIR1244-1-201ENST00000612829 85 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 MIR6888-201ENST00000621977 67 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 MIR1244-3-201ENST00000635744 85 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 MIR1244-2-201ENST00000636449 85 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 MIR1244-4-202ENST00000636813 85 ntBASIC-1.31□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 RNU6-996P-201ENST00000365438 107 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 MTND1P2-201ENST00000430604 821 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 RNA5SP401-201ENST00000515920 127 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 MIR5692C2-201ENST00000577959 77 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 RNU6-924P-201ENST00000362926 108 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 SNORD81.1-201ENST00000363064 77 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 RNY3P3-201ENST00000363816 102 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 RNU6-704P-201ENST00000364162 103 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 RNU4-50P-201ENST00000364361 141 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 RNU6-99P-201ENST00000364721 107 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 RNU6-453P-201ENST00000516819 85 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 MIR3942-201ENST00000585264 109 ntBASIC-1.32□□□□□ -2.62
CSPG4Q6UVK1 RNU4-68P-201ENST00000364314 141 ntBASIC-1.33□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.33□□□□□ -2.62
CSPG4Q6UVK1 RNU6-408P-201ENST00000515910 100 ntBASIC-1.33□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.33□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.33□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.33□□□□□ -2.62
CSPG4Q6UVK1 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.33□□□□□ -2.62
CSPG4Q6UVK1 MIR487B-201ENST00000385021 84 ntBASIC-1.33□□□□□ -2.62
CSPG4Q6UVK1 MRPS36P3-201ENST00000519284 130 ntBASIC-1.33□□□□□ -2.62
CSPG4Q6UVK1 MIR3129-201ENST00000581095 76 ntBASIC-1.33□□□□□ -2.62
CSPG4Q6UVK1 SNORA63.6-201ENST00000364921 119 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 RNU6-282P-201ENST00000365357 103 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 SNORD38.2-201ENST00000384470 69 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 RNU6-763P-201ENST00000390865 106 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 RNU6-648P-201ENST00000410190 107 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 RNU6-935P-201ENST00000410371 100 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 RNU7-88P-201ENST00000458752 63 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 RNU4-17P-201ENST00000365598 141 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 SNORD101-201ENST00000384027 73 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 RNU6-383P-201ENST00000410864 94 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 RNA5SP153-201ENST00000516498 76 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 MIR548AE2-201ENST00000583456 67 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 MIR548AB-201ENST00000584917 84 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 AC097639.2-201ENST00000603159 172 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 AC097520.1-201ENST00000624435 385 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 AP000720.1-201ENST00000625091 483 ntBASIC-1.34□□□□□ -2.62
CSPG4Q6UVK1 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 RNU6-472P-201ENST00000384299 107 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms