Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 SUMO1P3-201ENST00000439961 304 ntBASIC0.53□□□□□ -2.32
KRT39Q6A163 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
KRT39Q6A163 RNU6-1258P-201ENST00000516911 111 ntBASIC0.53□□□□□ -2.32
KRT39Q6A163 AC090897.1-201ENST00000580909 226 ntBASIC0.53□□□□□ -2.32
KRT39Q6A163 AC021613.1-201ENST00000623880 111 ntBASIC0.53□□□□□ -2.32
KRT39Q6A163 RNU4-45P-201ENST00000365469 141 ntBASIC0.52□□□□□ -2.33
KRT39Q6A163 Y_RNA.568-201ENST00000384742 113 ntBASIC0.52□□□□□ -2.33
KRT39Q6A163 MIR513C-201ENST00000401352 84 ntBASIC0.52□□□□□ -2.33
KRT39Q6A163 AL603914.1-201ENST00000401964 204 ntBASIC0.52□□□□□ -2.33
KRT39Q6A163 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.52□□□□□ -2.33
KRT39Q6A163 SNORD100-201ENST00000408573 76 ntBASIC0.52□□□□□ -2.33
KRT39Q6A163 RNU6-257P-201ENST00000410238 98 ntBASIC0.52□□□□□ -2.33
KRT39Q6A163 RNU6-240P-201ENST00000516098 97 ntBASIC0.52□□□□□ -2.33
KRT39Q6A163 Y_RNA.690-201ENST00000516603 95 ntBASIC0.52□□□□□ -2.33
KRT39Q6A163 Y_RNA.703-201ENST00000516846 111 ntBASIC0.52□□□□□ -2.33
KRT39Q6A163 RNU7-156P-201ENST00000517214 74 ntBASIC0.52□□□□□ -2.33
KRT39Q6A163 IGKV1-22-201ENST00000524313 326 ntBASIC0.52□□□□□ -2.33
KRT39Q6A163 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.52□□□□□ -2.33
KRT39Q6A163 AL662814.1-201ENST00000617364 121 ntBASIC0.52□□□□□ -2.33
KRT39Q6A163 SNORA22.1-201ENST00000362701 134 ntBASIC0.51□□□□□ -2.33
KRT39Q6A163 Y_RNA.171-201ENST00000363760 102 ntBASIC0.51□□□□□ -2.33
KRT39Q6A163 Y_RNA.366-201ENST00000365540 102 ntBASIC0.51□□□□□ -2.33
KRT39Q6A163 RNU6-746P-201ENST00000384112 109 ntBASIC0.51□□□□□ -2.33
KRT39Q6A163 RNU6-364P-201ENST00000384387 107 ntBASIC0.51□□□□□ -2.33
KRT39Q6A163 RNA5SP144-201ENST00000410846 116 ntBASIC0.51□□□□□ -2.33
KRT39Q6A163 MTND4LP9-201ENST00000427694 174 ntBASIC0.51□□□□□ -2.33
KRT39Q6A163 RNU2-35P-201ENST00000516446 142 ntBASIC0.51□□□□□ -2.33
KRT39Q6A163 Y_RNA.757-201ENST00000578934 114 ntBASIC0.51□□□□□ -2.33
KRT39Q6A163 AP001340.1-201ENST00000624405 217 ntBASIC0.51□□□□□ -2.33
KRT39Q6A163 RNU6-690P-201ENST00000365242 106 ntBASIC0.5□□□□□ -2.33
KRT39Q6A163 Y_RNA.586-201ENST00000391146 98 ntBASIC0.5□□□□□ -2.33
KRT39Q6A163 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.5□□□□□ -2.33
KRT39Q6A163 RNU7-123P-201ENST00000515911 60 ntBASIC0.5□□□□□ -2.33
KRT39Q6A163 RN7SKP12-201ENST00000516275 143 ntBASIC0.5□□□□□ -2.33
KRT39Q6A163 RNU7-70P-201ENST00000516941 66 ntBASIC0.5□□□□□ -2.33
KRT39Q6A163 AP001328.1-201ENST00000528550 176 ntBASIC0.5□□□□□ -2.33
KRT39Q6A163 MIR3121-201ENST00000579680 77 ntBASIC0.5□□□□□ -2.33
KRT39Q6A163 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.5□□□□□ -2.33
KRT39Q6A163 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.5□□□□□ -2.33
KRT39Q6A163 Y_RNA.114-201ENST00000363265 113 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 Y_RNA.470-201ENST00000384307 117 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 RNU6-342P-201ENST00000384521 104 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 MIR598-201ENST00000384868 97 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 RNU6-447P-201ENST00000410293 104 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 RNU6-1118P-201ENST00000410382 104 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 RNU6-1076P-201ENST00000410397 104 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 RNU6-355P-201ENST00000410427 104 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 RNU6-791P-201ENST00000410467 104 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 RNU6-705P-201ENST00000410601 104 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 RNU6-1100P-201ENST00000410691 104 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 RNU6-860P-201ENST00000410860 104 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 RNU6-1217P-201ENST00000411276 104 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 RNU6-785P-201ENST00000411324 104 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 AL512326.2-201ENST00000426359 151 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 AC098934.3-201ENST00000430450 190 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 MTATP6P21-201ENST00000440681 189 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 MIR1270-201ENST00000459320 83 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 SNORA68.3-201ENST00000515906 83 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 RNU5E-3P-201ENST00000515913 68 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 AC022523.2-201ENST00000561045 150 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 U7.2-201ENST00000607576 63 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 AC011603.4-201ENST00000611325 277 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 U6.90-201ENST00000614007 104 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 U6.70-201ENST00000620287 104 ntBASIC0.49□□□□□ -2.33
KRT39Q6A163 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.49□□□□□ -2.33
KRT39Q6A163 Y_RNA.343-201ENST00000365354 112 ntBASIC0.48□□□□□ -2.33
KRT39Q6A163 Y_RNA.525-201ENST00000384570 113 ntBASIC0.48□□□□□ -2.33
KRT39Q6A163 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.48□□□□□ -2.33
KRT39Q6A163 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
KRT39Q6A163 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
KRT39Q6A163 AC002350.1-201ENST00000490759 375 ntBASIC0.48□□□□□ -2.33
KRT39Q6A163 Y_RNA.692-201ENST00000516627 105 ntBASIC0.48□□□□□ -2.33
KRT39Q6A163 RNY4P20-201ENST00000516678 93 ntBASIC0.48□□□□□ -2.33
KRT39Q6A163 RNU6-971P-201ENST00000516920 106 ntBASIC0.48□□□□□ -2.33
KRT39Q6A163 AC133485.4-201ENST00000561835 220 ntBASIC0.48□□□□□ -2.33
KRT39Q6A163 AC138907.4-201ENST00000570107 226 ntBASIC0.48□□□□□ -2.33
KRT39Q6A163 MIR4305-201ENST00000583252 102 ntBASIC0.48□□□□□ -2.33
KRT39Q6A163 AC021443.1-201ENST00000604478 211 ntBASIC0.48□□□□□ -2.33
KRT39Q6A163 MIR8066-201ENST00000617280 78 ntBASIC0.48□□□□□ -2.33
KRT39Q6A163 RNU6-235P-201ENST00000362644 107 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 Y_RNA.42-201ENST00000362660 108 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 RNU6-704P-201ENST00000364162 103 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 Y_RNA.218-201ENST00000364218 104 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 Y_RNA.298-201ENST00000364960 107 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 SNORD50.2-201ENST00000365465 70 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 SNORD18B-201ENST00000365659 72 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 SNORA18-201ENST00000384416 132 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 RNU6-1104P-201ENST00000384723 104 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 MT-TI-201ENST00000387365 69 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 SNORA40-201ENST00000388090 126 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 MIR548M-201ENST00000408260 86 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 RNA5SP237-201ENST00000410414 113 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 Y_RNA.617-201ENST00000410920 90 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 AC096949.1-201ENST00000412047 152 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 AL158147.1-201ENST00000443970 75 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 RNU7-164P-201ENST00000459221 62 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 RNU6-781P-201ENST00000516377 101 ntBASIC0.47□□□□□ -2.33
KRT39Q6A163 MIR3152-201ENST00000579801 74 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 207.3 ms