Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC245517.4-201ENST00000448601 281 ntBASIC1.77□□□□□ -2.13
HLA-DQA1Q5Y7H0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.77□□□□□ -2.13
HLA-DQA1Q5Y7H0 SNORA44.1-201ENST00000517031 108 ntBASIC1.77□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNU6-165P-201ENST00000517170 99 ntBASIC1.77□□□□□ -2.13
HLA-DQA1Q5Y7H0 MIR3664-201ENST00000579074 99 ntBASIC1.77□□□□□ -2.13
HLA-DQA1Q5Y7H0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
HLA-DQA1Q5Y7H0 SNORD38.2-201ENST00000384470 69 ntBASIC1.76□□□□□ -2.13
HLA-DQA1Q5Y7H0 MIR676-201ENST00000390702 67 ntBASIC1.76□□□□□ -2.13
HLA-DQA1Q5Y7H0 HMGN2P38-201ENST00000423806 265 ntBASIC1.76□□□□□ -2.13
HLA-DQA1Q5Y7H0 snoU13.26-201ENST00000459452 105 ntBASIC1.76□□□□□ -2.13
HLA-DQA1Q5Y7H0 RPS27P21-201ENST00000486977 252 ntBASIC1.76□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNA5SP182-201ENST00000516064 82 ntBASIC1.76□□□□□ -2.13
HLA-DQA1Q5Y7H0 AC138749.4-201ENST00000563970 127 ntBASIC1.76□□□□□ -2.13
HLA-DQA1Q5Y7H0 SNORA4-201ENST00000584302 138 ntBASIC1.76□□□□□ -2.13
HLA-DQA1Q5Y7H0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DQA1Q5Y7H0 AC131280.1-202ENST00000624067 4211 ntBASIC1.75□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNU6-1244P-201ENST00000363614 108 ntBASIC1.75□□□□□ -2.13
HLA-DQA1Q5Y7H0 Y_RNA.173-201ENST00000363776 113 ntBASIC1.75□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNY1P2-201ENST00000364820 117 ntBASIC1.75□□□□□ -2.13
HLA-DQA1Q5Y7H0 MT-TN-201ENST00000387400 73 ntBASIC1.75□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNA5SP364-201ENST00000516938 78 ntBASIC1.75□□□□□ -2.13
HLA-DQA1Q5Y7H0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.75□□□□□ -2.13
HLA-DQA1Q5Y7H0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DQA1Q5Y7H0 AC020891.4-201ENST00000605745 93 ntBASIC1.75□□□□□ -2.13
HLA-DQA1Q5Y7H0 IGLL4P-201ENST00000614590 133 ntBASIC1.75□□□□□ -2.13
HLA-DQA1Q5Y7H0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.75□□□□□ -2.13
HLA-DQA1Q5Y7H0 U6.109-201ENST00000636749 87 ntBASIC1.75□□□□□ -2.13
HLA-DQA1Q5Y7H0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 SNORD33-201ENST00000362761 85 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 Y_RNA.168-201ENST00000363740 102 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 SNORD116-10-201ENST00000363791 102 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNY1P1-201ENST00000364372 112 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 SNORD116-22-201ENST00000384430 92 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNU6-402P-201ENST00000410678 103 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNA5SP233-201ENST00000459153 113 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 snoU13.15-201ENST00000459407 104 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 RPL30P7-201ENST00000479312 323 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 RPS29P11-201ENST00000496507 171 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNU6-267P-201ENST00000516714 103 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNU11-2P-201ENST00000516898 142 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 AL512310.8-201ENST00000550183 120 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 MIR4500-201ENST00000579472 76 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 AC090897.1-201ENST00000580909 226 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 AP000553.5-201ENST00000641933 54 ntBASIC1.74□□□□□ -2.13
HLA-DQA1Q5Y7H0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DQA1Q5Y7H0 MIR181B2-201ENST00000385004 89 ntBASIC1.73□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNU6-613P-201ENST00000410412 108 ntBASIC1.73□□□□□ -2.13
HLA-DQA1Q5Y7H0 AL359851.1-201ENST00000569460 4997 ntBASIC1.72□□□□□ -2.13
HLA-DQA1Q5Y7H0 Y_RNA.73-201ENST00000362910 113 ntBASIC1.72□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNA5SP133-201ENST00000363368 119 ntBASIC1.72□□□□□ -2.13
HLA-DQA1Q5Y7H0 SNORA16.1-201ENST00000364597 132 ntBASIC1.72□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNU6-1152P-201ENST00000384576 107 ntBASIC1.72□□□□□ -2.13
HLA-DQA1Q5Y7H0 SNORA2B-201ENST00000384583 137 ntBASIC1.72□□□□□ -2.13
HLA-DQA1Q5Y7H0 RNY1P4-201ENST00000384595 115 ntBASIC1.72□□□□□ -2.13
HLA-DQA1Q5Y7H0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HLA-DQA1Q5Y7H0 SNORA40.18-201ENST00000391200 128 ntBASIC1.72□□□□□ -2.13
HLA-DQA1Q5Y7H0 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.72□□□□□ -2.13
HLA-DQA1Q5Y7H0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DQA1Q5Y7H0 MIR1245B-201ENST00000636115 69 ntBASIC1.72□□□□□ -2.13
HLA-DQA1Q5Y7H0 Y_RNA.119-201ENST00000363301 96 ntBASIC1.71□□□□□ -2.14
HLA-DQA1Q5Y7H0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
HLA-DQA1Q5Y7H0 AC022137.1-201ENST00000483735 151 ntBASIC1.71□□□□□ -2.14
HLA-DQA1Q5Y7H0 HSBP1P2-201ENST00000299671 229 ntBASIC1.7□□□□□ -2.14
HLA-DQA1Q5Y7H0 RNU6-580P-201ENST00000365159 107 ntBASIC1.7□□□□□ -2.14
HLA-DQA1Q5Y7H0 RNA5SP338-201ENST00000410495 85 ntBASIC1.7□□□□□ -2.14
HLA-DQA1Q5Y7H0 RPS27P16-201ENST00000425758 201 ntBASIC1.7□□□□□ -2.14
HLA-DQA1Q5Y7H0 AC048334.1-201ENST00000477975 159 ntBASIC1.7□□□□□ -2.14
HLA-DQA1Q5Y7H0 AL513043.2-201ENST00000573941 143 ntBASIC1.7□□□□□ -2.14
HLA-DQA1Q5Y7H0 MIR4668-201ENST00000582284 70 ntBASIC1.7□□□□□ -2.14
HLA-DQA1Q5Y7H0 MIR4448-201ENST00000584360 86 ntBASIC1.7□□□□□ -2.14
HLA-DQA1Q5Y7H0 AL096840.1-201ENST00000603287 93 ntBASIC1.7□□□□□ -2.14
HLA-DQA1Q5Y7H0 AC025521.1-201ENST00000621624 286 ntBASIC1.7□□□□□ -2.14
HLA-DQA1Q5Y7H0 MIR377-201ENST00000362145 69 ntBASIC1.69□□□□□ -2.14
HLA-DQA1Q5Y7H0 RNU6-219P-201ENST00000364728 107 ntBASIC1.69□□□□□ -2.14
HLA-DQA1Q5Y7H0 RNU6-675P-201ENST00000384236 104 ntBASIC1.69□□□□□ -2.14
HLA-DQA1Q5Y7H0 MT-TF-201ENST00000387314 71 ntBASIC1.69□□□□□ -2.14
HLA-DQA1Q5Y7H0 RNU1-78P-201ENST00000391248 165 ntBASIC1.69□□□□□ -2.14
HLA-DQA1Q5Y7H0 RNU4-83P-201ENST00000410863 133 ntBASIC1.69□□□□□ -2.14
HLA-DQA1Q5Y7H0 snoU13.21-201ENST00000459368 105 ntBASIC1.69□□□□□ -2.14
HLA-DQA1Q5Y7H0 RNU6-295P-201ENST00000516901 104 ntBASIC1.69□□□□□ -2.14
HLA-DQA1Q5Y7H0 uc_338.20-201ENST00000621563 178 ntBASIC1.69□□□□□ -2.14
HLA-DQA1Q5Y7H0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DQA1Q5Y7H0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.68□□□□□ -2.14
HLA-DQA1Q5Y7H0 Y_RNA.609-201ENST00000410669 89 ntBASIC1.68□□□□□ -2.14
HLA-DQA1Q5Y7H0 BX276092.1-201ENST00000427368 251 ntBASIC1.68□□□□□ -2.14
HLA-DQA1Q5Y7H0 AC003989.2-201ENST00000440224 169 ntBASIC1.68□□□□□ -2.14
HLA-DQA1Q5Y7H0 MIR3198-2-201ENST00000577868 80 ntBASIC1.68□□□□□ -2.14
HLA-DQA1Q5Y7H0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
HLA-DQA1Q5Y7H0 RNU6-1125P-201ENST00000363601 107 ntBASIC1.67□□□□□ -2.14
HLA-DQA1Q5Y7H0 RNU6-497P-201ENST00000365316 104 ntBASIC1.67□□□□□ -2.14
HLA-DQA1Q5Y7H0 RNU6-480P-201ENST00000384332 107 ntBASIC1.67□□□□□ -2.14
HLA-DQA1Q5Y7H0 U8.13-201ENST00000390842 128 ntBASIC1.67□□□□□ -2.14
HLA-DQA1Q5Y7H0 SNORD93-201ENST00000408813 74 ntBASIC1.67□□□□□ -2.14
HLA-DQA1Q5Y7H0 Y_RNA.620-201ENST00000411009 88 ntBASIC1.67□□□□□ -2.14
HLA-DQA1Q5Y7H0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.67□□□□□ -2.14
HLA-DQA1Q5Y7H0 AC008834.1-201ENST00000511612 175 ntBASIC1.67□□□□□ -2.14
HLA-DQA1Q5Y7H0 RN7SKP88-201ENST00000516847 250 ntBASIC1.67□□□□□ -2.14
HLA-DQA1Q5Y7H0 MIR4419B-201ENST00000577260 68 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 1802.3 ms