Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU6-397P-201ENST00000516226 104 ntBASIC-2.75□□□□□ -2.85
CCDC58Q4VC31 RNU6-835P-201ENST00000516974 104 ntBASIC-2.75□□□□□ -2.85
CCDC58Q4VC31 U6.100-201ENST00000636230 99 ntBASIC-2.75□□□□□ -2.85
CCDC58Q4VC31 Y_RNA.171-201ENST00000363760 102 ntBASIC-2.76□□□□□ -2.85
CCDC58Q4VC31 SNORD114-4-201ENST00000363962 75 ntBASIC-2.76□□□□□ -2.85
CCDC58Q4VC31 RNU6-801P-201ENST00000364087 105 ntBASIC-2.76□□□□□ -2.85
CCDC58Q4VC31 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.76□□□□□ -2.85
CCDC58Q4VC31 RNU6-80P-201ENST00000384195 107 ntBASIC-2.76□□□□□ -2.85
CCDC58Q4VC31 Y_RNA.470-201ENST00000384307 117 ntBASIC-2.76□□□□□ -2.85
CCDC58Q4VC31 RNU6-21P-201ENST00000384710 107 ntBASIC-2.76□□□□□ -2.85
CCDC58Q4VC31 RNU2-66P-201ENST00000410650 161 ntBASIC-2.76□□□□□ -2.85
CCDC58Q4VC31 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.76□□□□□ -2.85
CCDC58Q4VC31 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-2.76□□□□□ -2.85
CCDC58Q4VC31 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.77□□□□□ -2.85
CCDC58Q4VC31 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.77□□□□□ -2.85
CCDC58Q4VC31 RNU6-1214P-201ENST00000363650 109 ntBASIC-2.77□□□□□ -2.85
CCDC58Q4VC31 RNU4-17P-201ENST00000365598 141 ntBASIC-2.77□□□□□ -2.85
CCDC58Q4VC31 Y_RNA.596-201ENST00000410462 109 ntBASIC-2.77□□□□□ -2.85
CCDC58Q4VC31 RNU6-118P-201ENST00000516552 102 ntBASIC-2.77□□□□□ -2.85
CCDC58Q4VC31 MIR5197-201ENST00000583721 112 ntBASIC-2.77□□□□□ -2.85
CCDC58Q4VC31 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-2.77□□□□□ -2.85
CCDC58Q4VC31 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.77□□□□□ -2.85
CCDC58Q4VC31 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.78□□□□□ -2.85
CCDC58Q4VC31 SNORD81.1-201ENST00000363064 77 ntBASIC-2.78□□□□□ -2.85
CCDC58Q4VC31 RNU6-1205P-201ENST00000363625 106 ntBASIC-2.78□□□□□ -2.85
CCDC58Q4VC31 Y_RNA.169-201ENST00000363745 96 ntBASIC-2.78□□□□□ -2.85
CCDC58Q4VC31 RNU6-899P-201ENST00000363947 107 ntBASIC-2.78□□□□□ -2.85
CCDC58Q4VC31 SNORA63.6-201ENST00000364921 119 ntBASIC-2.78□□□□□ -2.85
CCDC58Q4VC31 Y_RNA.515-201ENST00000384535 112 ntBASIC-2.78□□□□□ -2.85
CCDC58Q4VC31 MIR1207-201ENST00000408249 87 ntBASIC-2.78□□□□□ -2.85
CCDC58Q4VC31 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.78□□□□□ -2.85
CCDC58Q4VC31 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-2.78□□□□□ -2.85
CCDC58Q4VC31 SNORD42B-201ENST00000458893 67 ntBASIC-2.78□□□□□ -2.85
CCDC58Q4VC31 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.78□□□□□ -2.85
CCDC58Q4VC31 AP002795.1-201ENST00000534879 84 ntBASIC-2.78□□□□□ -2.85
CCDC58Q4VC31 AC090617.8-201ENST00000623339 167 ntBASIC-2.78□□□□□ -2.85
CCDC58Q4VC31 RNU6-79P-201ENST00000362511 107 ntBASIC-2.79□□□□□ -2.86
CCDC58Q4VC31 SNORA32-201ENST00000384072 121 ntBASIC-2.79□□□□□ -2.86
CCDC58Q4VC31 RNU6-1321P-201ENST00000390905 107 ntBASIC-2.79□□□□□ -2.86
CCDC58Q4VC31 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-2.79□□□□□ -2.86
CCDC58Q4VC31 RNU6-311P-201ENST00000516224 102 ntBASIC-2.79□□□□□ -2.86
CCDC58Q4VC31 MIR3145-201ENST00000580727 82 ntBASIC-2.79□□□□□ -2.86
CCDC58Q4VC31 AC005014.3-201ENST00000605985 190 ntBASIC-2.79□□□□□ -2.86
CCDC58Q4VC31 Y_RNA.331-201ENST00000365267 102 ntBASIC-2.8□□□□□ -2.86
CCDC58Q4VC31 Y_RNA.342-201ENST00000365352 113 ntBASIC-2.8□□□□□ -2.86
CCDC58Q4VC31 Y_RNA.615-201ENST00000410769 117 ntBASIC-2.8□□□□□ -2.86
CCDC58Q4VC31 RPL35AP4-201ENST00000412007 102 ntBASIC-2.8□□□□□ -2.86
CCDC58Q4VC31 AC018880.2-201ENST00000414265 201 ntBASIC-2.8□□□□□ -2.86
CCDC58Q4VC31 MIR1244-1-201ENST00000612829 85 ntBASIC-2.8□□□□□ -2.86
CCDC58Q4VC31 TRDV1-202ENST00000621643 102 ntBASIC-2.8□□□□□ -2.86
CCDC58Q4VC31 MIR1244-3-201ENST00000635744 85 ntBASIC-2.8□□□□□ -2.86
CCDC58Q4VC31 MIR1244-2-201ENST00000636449 85 ntBASIC-2.8□□□□□ -2.86
CCDC58Q4VC31 MIR1244-4-202ENST00000636813 85 ntBASIC-2.8□□□□□ -2.86
CCDC58Q4VC31 RNU6-119P-201ENST00000364882 107 ntBASIC-2.81□□□□□ -2.86
CCDC58Q4VC31 Y_RNA.414-201ENST00000384011 101 ntBASIC-2.81□□□□□ -2.86
CCDC58Q4VC31 MIR216B-201ENST00000390186 82 ntBASIC-2.81□□□□□ -2.86
CCDC58Q4VC31 AL161932.1-201ENST00000437408 146 ntBASIC-2.81□□□□□ -2.86
CCDC58Q4VC31 RNU6-559P-201ENST00000516151 98 ntBASIC-2.81□□□□□ -2.86
CCDC58Q4VC31 RNU6-980P-201ENST00000516925 103 ntBASIC-2.81□□□□□ -2.86
CCDC58Q4VC31 AC006504.6-201ENST00000590142 199 ntBASIC-2.81□□□□□ -2.86
CCDC58Q4VC31 AC068137.3-201ENST00000639191 341 ntBASIC-2.81□□□□□ -2.86
CCDC58Q4VC31 RNU6-102P-201ENST00000384485 104 ntBASIC-2.82□□□□□ -2.86
CCDC58Q4VC31 MIR516A2-201ENST00000384888 90 ntBASIC-2.82□□□□□ -2.86
CCDC58Q4VC31 MIR516A1-201ENST00000385033 90 ntBASIC-2.82□□□□□ -2.86
CCDC58Q4VC31 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-2.82□□□□□ -2.86
CCDC58Q4VC31 MIR2053-201ENST00000459295 91 ntBASIC-2.82□□□□□ -2.86
CCDC58Q4VC31 AC092794.2-201ENST00000620933 563 ntBASIC-2.82□□□□□ -2.86
CCDC58Q4VC31 AF246928.1-201ENST00000623768 87 ntBASIC-2.82□□□□□ -2.86
CCDC58Q4VC31 Y_RNA.304-201ENST00000365011 112 ntBASIC-2.83□□□□□ -2.86
CCDC58Q4VC31 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.83□□□□□ -2.86
CCDC58Q4VC31 MIR4659A-201ENST00000580269 81 ntBASIC-2.83□□□□□ -2.86
CCDC58Q4VC31 MIR4490-201ENST00000582647 84 ntBASIC-2.83□□□□□ -2.86
CCDC58Q4VC31 MIR6128-201ENST00000615528 109 ntBASIC-2.83□□□□□ -2.86
CCDC58Q4VC31 Y_RNA.91-201ENST00000363042 107 ntBASIC-2.84□□□□□ -2.86
CCDC58Q4VC31 RNA5SP405-201ENST00000363059 114 ntBASIC-2.84□□□□□ -2.86
CCDC58Q4VC31 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.84□□□□□ -2.86
CCDC58Q4VC31 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.84□□□□□ -2.86
CCDC58Q4VC31 MTND1P34-201ENST00000438556 671 ntBASIC-2.84□□□□□ -2.86
CCDC58Q4VC31 RPS29P25-201ENST00000481709 171 ntBASIC-2.84□□□□□ -2.86
CCDC58Q4VC31 Y_RNA.77-201ENST00000362962 107 ntBASIC-2.85□□□□□ -2.87
CCDC58Q4VC31 Y_RNA.157-201ENST00000363638 102 ntBASIC-2.85□□□□□ -2.87
CCDC58Q4VC31 RNU6-647P-201ENST00000364243 107 ntBASIC-2.85□□□□□ -2.87
CCDC58Q4VC31 AC113618.1-201ENST00000416747 285 ntBASIC-2.85□□□□□ -2.87
CCDC58Q4VC31 MTCO2P24-201ENST00000515611 426 ntBASIC-2.85□□□□□ -2.87
CCDC58Q4VC31 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-2.85□□□□□ -2.87
CCDC58Q4VC31 MIR3139-201ENST00000579145 76 ntBASIC-2.85□□□□□ -2.87
CCDC58Q4VC31 MIR4723-201ENST00000585070 81 ntBASIC-2.85□□□□□ -2.87
CCDC58Q4VC31 AC040904.1-201ENST00000590850 223 ntBASIC-2.85□□□□□ -2.87
CCDC58Q4VC31 MIR367-201ENST00000362299 68 ntBASIC-2.86□□□□□ -2.87
CCDC58Q4VC31 RNU6-553P-201ENST00000364047 96 ntBASIC-2.86□□□□□ -2.87
CCDC58Q4VC31 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.86□□□□□ -2.87
CCDC58Q4VC31 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.86□□□□□ -2.87
CCDC58Q4VC31 Y_RNA.592-201ENST00000410274 109 ntBASIC-2.86□□□□□ -2.87
CCDC58Q4VC31 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.86□□□□□ -2.87
CCDC58Q4VC31 RNU6-1068P-201ENST00000410958 103 ntBASIC-2.86□□□□□ -2.87
CCDC58Q4VC31 RNU7-48P-201ENST00000458875 63 ntBASIC-2.86□□□□□ -2.87
CCDC58Q4VC31 RNU7-70P-201ENST00000516941 66 ntBASIC-2.86□□□□□ -2.87
CCDC58Q4VC31 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-2.86□□□□□ -2.87
CCDC58Q4VC31 MTND3P12-201ENST00000559068 328 ntBASIC-2.86□□□□□ -2.87
CCDC58Q4VC31 MIR5683-201ENST00000636514 76 ntBASIC-2.86□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms