Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SNORD116-24-201ENST00000384549 92 ntBASIC2.39□□□□□ -2.03
RSPO4Q2I0M5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.39□□□□□ -2.03
RSPO4Q2I0M5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.39□□□□□ -2.03
RSPO4Q2I0M5 RNA5SP380-201ENST00000517190 98 ntBASIC2.39□□□□□ -2.03
RSPO4Q2I0M5 AC121758.2-201ENST00000553271 193 ntBASIC2.39□□□□□ -2.03
RSPO4Q2I0M5 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.39□□□□□ -2.03
RSPO4Q2I0M5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
RSPO4Q2I0M5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
RSPO4Q2I0M5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
RSPO4Q2I0M5 RNU1-58P-201ENST00000362413 163 ntBASIC2.38□□□□□ -2.03
RSPO4Q2I0M5 SNORD115-22-201ENST00000364456 82 ntBASIC2.38□□□□□ -2.03
RSPO4Q2I0M5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.38□□□□□ -2.03
RSPO4Q2I0M5 AC104332.2-201ENST00000429959 156 ntBASIC2.38□□□□□ -2.03
RSPO4Q2I0M5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
RSPO4Q2I0M5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.37□□□□□ -2.03
RSPO4Q2I0M5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RSPO4Q2I0M5 RNU6-1216P-201ENST00000362590 107 ntBASIC2.37□□□□□ -2.03
RSPO4Q2I0M5 RNU6-461P-201ENST00000364195 107 ntBASIC2.37□□□□□ -2.03
RSPO4Q2I0M5 SNORA26.9-201ENST00000391322 122 ntBASIC2.37□□□□□ -2.03
RSPO4Q2I0M5 MIR2113-201ENST00000459007 91 ntBASIC2.37□□□□□ -2.03
RSPO4Q2I0M5 snoU13.31-201ENST00000607291 104 ntBASIC2.37□□□□□ -2.03
RSPO4Q2I0M5 MIR8070-201ENST00000616510 88 ntBASIC2.37□□□□□ -2.03
RSPO4Q2I0M5 MIR6733-201ENST00000635723 61 ntBASIC2.37□□□□□ -2.03
RSPO4Q2I0M5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.37□□□□□ -2.03
RSPO4Q2I0M5 ZNF209P-201ENST00000593450 2304 ntBASIC2.36□□□□□ -2.03
RSPO4Q2I0M5 SNORD45.1-201ENST00000363181 77 ntBASIC2.36□□□□□ -2.03
RSPO4Q2I0M5 MIR520C-201ENST00000385005 87 ntBASIC2.36□□□□□ -2.03
RSPO4Q2I0M5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.36□□□□□ -2.03
RSPO4Q2I0M5 AC108667.1-201ENST00000428618 249 ntBASIC2.36□□□□□ -2.03
RSPO4Q2I0M5 snoU13.18-201ENST00000459483 104 ntBASIC2.36□□□□□ -2.03
RSPO4Q2I0M5 RNU7-106P-201ENST00000459514 67 ntBASIC2.36□□□□□ -2.03
RSPO4Q2I0M5 AC026271.5-201ENST00000577873 130 ntBASIC2.36□□□□□ -2.03
RSPO4Q2I0M5 MIR3605-201ENST00000583214 100 ntBASIC2.36□□□□□ -2.03
RSPO4Q2I0M5 MIR3935-201ENST00000583472 104 ntBASIC2.36□□□□□ -2.03
RSPO4Q2I0M5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.36□□□□□ -2.03
RSPO4Q2I0M5 AL096861.1-201ENST00000610899 123 ntBASIC2.36□□□□□ -2.03
RSPO4Q2I0M5 AC069503.3-201ENST00000618674 145 ntBASIC2.36□□□□□ -2.03
RSPO4Q2I0M5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RSPO4Q2I0M5 Y_RNA.236-201ENST00000364427 111 ntBASIC2.35□□□□□ -2.03
RSPO4Q2I0M5 RNY4P3-201ENST00000365254 95 ntBASIC2.35□□□□□ -2.03
RSPO4Q2I0M5 RNA5SP210-201ENST00000391034 120 ntBASIC2.35□□□□□ -2.03
RSPO4Q2I0M5 Y_RNA.606-201ENST00000410579 103 ntBASIC2.35□□□□□ -2.03
RSPO4Q2I0M5 AC092427.1-202ENST00000430569 476 ntBASIC2.35□□□□□ -2.03
RSPO4Q2I0M5 snoU13.2-201ENST00000459201 104 ntBASIC2.35□□□□□ -2.03
RSPO4Q2I0M5 AC099513.1-201ENST00000490423 301 ntBASIC2.35□□□□□ -2.03
RSPO4Q2I0M5 MIR4251-201ENST00000635819 61 ntBASIC2.35□□□□□ -2.03
RSPO4Q2I0M5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.35□□□□□ -2.03
RSPO4Q2I0M5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RSPO4Q2I0M5 SNORD113.1-201ENST00000363280 73 ntBASIC2.34□□□□□ -2.03
RSPO4Q2I0M5 RNU6-829P-201ENST00000363700 112 ntBASIC2.34□□□□□ -2.03
RSPO4Q2I0M5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
RSPO4Q2I0M5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
RSPO4Q2I0M5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.33□□□□□ -2.04
RSPO4Q2I0M5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.33□□□□□ -2.04
RSPO4Q2I0M5 MIR29C-201ENST00000385231 88 ntBASIC2.33□□□□□ -2.04
RSPO4Q2I0M5 U8.13-201ENST00000390842 128 ntBASIC2.33□□□□□ -2.04
RSPO4Q2I0M5 BX510359.4-201ENST00000423750 193 ntBASIC2.33□□□□□ -2.04
RSPO4Q2I0M5 AC244023.1-201ENST00000426884 112 ntBASIC2.33□□□□□ -2.04
RSPO4Q2I0M5 RNU6-56P-201ENST00000516986 93 ntBASIC2.33□□□□□ -2.04
RSPO4Q2I0M5 SNORA31.26-201ENST00000517250 137 ntBASIC2.33□□□□□ -2.04
RSPO4Q2I0M5 MIR4709-201ENST00000577272 72 ntBASIC2.33□□□□□ -2.04
RSPO4Q2I0M5 AC242498.1-201ENST00000604134 111 ntBASIC2.33□□□□□ -2.04
RSPO4Q2I0M5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RSPO4Q2I0M5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 SNORD56.5-201ENST00000364281 72 ntBASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 MIR563-201ENST00000385080 79 ntBASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 SNORA40.6-201ENST00000391153 128 ntBASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 RNU6-321P-201ENST00000410912 106 ntBASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 SNORD63B-201ENST00000411005 70 ntBASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 UBBP3-201ENST00000445497 241 ntBASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 AC026436.1-201ENST00000510537 270 ntBASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 RNA5SP437-201ENST00000517249 129 ntBASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 SNORA4-201ENST00000584302 138 ntBASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.32□□□□□ -2.04
RSPO4Q2I0M5 MIR424-201ENST00000362227 98 ntBASIC2.31□□□□□ -2.04
RSPO4Q2I0M5 Y_RNA.239-201ENST00000364444 113 ntBASIC2.31□□□□□ -2.04
RSPO4Q2I0M5 SNORA67.3-201ENST00000384366 140 ntBASIC2.31□□□□□ -2.04
RSPO4Q2I0M5 MIR520A-201ENST00000384862 85 ntBASIC2.31□□□□□ -2.04
RSPO4Q2I0M5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.31□□□□□ -2.04
RSPO4Q2I0M5 RNU6-1194P-201ENST00000516208 104 ntBASIC2.31□□□□□ -2.04
RSPO4Q2I0M5 SNORA9.3-201ENST00000516383 129 ntBASIC2.31□□□□□ -2.04
RSPO4Q2I0M5 SUB1P4-201ENST00000566062 339 ntBASIC2.31□□□□□ -2.04
RSPO4Q2I0M5 MIR3140-201ENST00000583685 90 ntBASIC2.31□□□□□ -2.04
RSPO4Q2I0M5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
RSPO4Q2I0M5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RSPO4Q2I0M5 MIR588-201ENST00000384900 83 ntBASIC2.3□□□□□ -2.04
RSPO4Q2I0M5 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RSPO4Q2I0M5 RNA5SP492-201ENST00000411330 114 ntBASIC2.3□□□□□ -2.04
RSPO4Q2I0M5 RPS27P16-201ENST00000425758 201 ntBASIC2.3□□□□□ -2.04
RSPO4Q2I0M5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RSPO4Q2I0M5 AC009474.2-201ENST00000451383 136 ntBASIC2.3□□□□□ -2.04
RSPO4Q2I0M5 RNU2-19P-201ENST00000517288 84 ntBASIC2.3□□□□□ -2.04
RSPO4Q2I0M5 U6.81-201ENST00000612550 106 ntBASIC2.3□□□□□ -2.04
RSPO4Q2I0M5 MIR1291-201ENST00000627649 87 ntBASIC2.3□□□□□ -2.04
RSPO4Q2I0M5 MIR378A-201ENST00000362177 66 ntBASIC2.29□□□□□ -2.04
RSPO4Q2I0M5 MIR597-201ENST00000384968 97 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms