Protein–RNA interactions for Protein: Q03395

ROM1, Rod outer segment membrane protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1Q03395 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.41□□□□□ -2.18
ROM1Q03395 SNORD111-201ENST00000408139 94 ntBASIC1.41□□□□□ -2.18
ROM1Q03395 RPS29P28-201ENST00000446439 141 ntBASIC1.41□□□□□ -2.18
ROM1Q03395 Y_RNA.677-201ENST00000516401 85 ntBASIC1.41□□□□□ -2.18
ROM1Q03395 RNU6-1006P-201ENST00000516998 103 ntBASIC1.41□□□□□ -2.18
ROM1Q03395 AC138749.4-201ENST00000563970 127 ntBASIC1.41□□□□□ -2.18
ROM1Q03395 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.41□□□□□ -2.18
ROM1Q03395 AP001362.1-201ENST00000625165 124 ntBASIC1.41□□□□□ -2.18
ROM1Q03395 RNU6-934P-201ENST00000365154 107 ntBASIC1.4□□□□□ -2.19
ROM1Q03395 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
ROM1Q03395 SNORD93-201ENST00000408813 74 ntBASIC1.4□□□□□ -2.19
ROM1Q03395 Y_RNA.601-201ENST00000410500 113 ntBASIC1.4□□□□□ -2.19
ROM1Q03395 Y_RNA.659-201ENST00000515994 113 ntBASIC1.4□□□□□ -2.19
ROM1Q03395 SCARNA23-201ENST00000516060 130 ntBASIC1.4□□□□□ -2.19
ROM1Q03395 RNU1-41P-201ENST00000516161 162 ntBASIC1.4□□□□□ -2.19
ROM1Q03395 RNU6-795P-201ENST00000516323 103 ntBASIC1.4□□□□□ -2.19
ROM1Q03395 RNU1-48P-201ENST00000516400 162 ntBASIC1.4□□□□□ -2.19
ROM1Q03395 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.4□□□□□ -2.19
ROM1Q03395 AP001318.4-201ENST00000616637 121 ntBASIC1.4□□□□□ -2.19
ROM1Q03395 Y_RNA.818-201ENST00000618813 71 ntBASIC1.4□□□□□ -2.19
ROM1Q03395 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
ROM1Q03395 Y_RNA.10-201ENST00000362371 110 ntBASIC1.39□□□□□ -2.19
ROM1Q03395 RNA5SP133-201ENST00000363368 119 ntBASIC1.39□□□□□ -2.19
ROM1Q03395 RNY1P2-201ENST00000364820 117 ntBASIC1.39□□□□□ -2.19
ROM1Q03395 RNU1-36P-201ENST00000365130 165 ntBASIC1.39□□□□□ -2.19
ROM1Q03395 Y_RNA.348-201ENST00000365403 103 ntBASIC1.39□□□□□ -2.19
ROM1Q03395 SNORA25-201ENST00000384384 134 ntBASIC1.39□□□□□ -2.19
ROM1Q03395 RNU7-185P-201ENST00000459215 60 ntBASIC1.39□□□□□ -2.19
ROM1Q03395 RNU6-970P-201ENST00000516312 107 ntBASIC1.39□□□□□ -2.19
ROM1Q03395 RNU7-40P-201ENST00000516397 64 ntBASIC1.39□□□□□ -2.19
ROM1Q03395 MIR4771-2-201ENST00000577758 74 ntBASIC1.39□□□□□ -2.19
ROM1Q03395 MIR4771-1-201ENST00000582617 74 ntBASIC1.39□□□□□ -2.19
ROM1Q03395 MIR502-201ENST00000606349 86 ntBASIC1.39□□□□□ -2.19
ROM1Q03395 AC091304.10-201ENST00000641554 121 ntBASIC1.39□□□□□ -2.19
ROM1Q03395 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ROM1Q03395 MIR1257-201ENST00000408490 117 ntBASIC1.38□□□□□ -2.19
ROM1Q03395 RNU6-994P-201ENST00000410507 111 ntBASIC1.38□□□□□ -2.19
ROM1Q03395 MIR548Z-201ENST00000584743 97 ntBASIC1.38□□□□□ -2.19
ROM1Q03395 AC096720.1-201ENST00000604441 183 ntBASIC1.38□□□□□ -2.19
ROM1Q03395 MIR6845-201ENST00000613182 61 ntBASIC1.38□□□□□ -2.19
ROM1Q03395 AC012531.4-201ENST00000616509 177 ntBASIC1.38□□□□□ -2.19
ROM1Q03395 SNORD38.1-201ENST00000363863 68 ntBASIC1.37□□□□□ -2.19
ROM1Q03395 MIR320A-201ENST00000385302 82 ntBASIC1.37□□□□□ -2.19
ROM1Q03395 SNORD12-201ENST00000391002 90 ntBASIC1.37□□□□□ -2.19
ROM1Q03395 Y_RNA.588-201ENST00000391254 102 ntBASIC1.37□□□□□ -2.19
ROM1Q03395 AC002429.1-201ENST00000437672 148 ntBASIC1.37□□□□□ -2.19
ROM1Q03395 RNU1-98P-201ENST00000458992 160 ntBASIC1.37□□□□□ -2.19
ROM1Q03395 AC090897.1-201ENST00000580909 226 ntBASIC1.37□□□□□ -2.19
ROM1Q03395 MIR4491-201ENST00000581087 68 ntBASIC1.37□□□□□ -2.19
ROM1Q03395 MIR4781-201ENST00000585250 76 ntBASIC1.37□□□□□ -2.19
ROM1Q03395 AC020891.4-201ENST00000605745 93 ntBASIC1.37□□□□□ -2.19
ROM1Q03395 RNU6-170P-201ENST00000362832 104 ntBASIC1.36□□□□□ -2.19
ROM1Q03395 RNU6-403P-201ENST00000363163 104 ntBASIC1.36□□□□□ -2.19
ROM1Q03395 Y_RNA.107-201ENST00000363190 121 ntBASIC1.36□□□□□ -2.19
ROM1Q03395 Y_RNA.140-201ENST00000363474 103 ntBASIC1.36□□□□□ -2.19
ROM1Q03395 RNU6-640P-201ENST00000363693 105 ntBASIC1.36□□□□□ -2.19
ROM1Q03395 SNORD45B-201ENST00000364617 72 ntBASIC1.36□□□□□ -2.19
ROM1Q03395 RNU6-905P-201ENST00000384434 107 ntBASIC1.36□□□□□ -2.19
ROM1Q03395 SNORA72.6-201ENST00000384520 129 ntBASIC1.36□□□□□ -2.19
ROM1Q03395 SNORA25.16-201ENST00000516741 121 ntBASIC1.36□□□□□ -2.19
ROM1Q03395 MIR8081-201ENST00000611533 95 ntBASIC1.36□□□□□ -2.19
ROM1Q03395 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
ROM1Q03395 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
ROM1Q03395 Y_RNA.119-201ENST00000363301 96 ntBASIC1.35□□□□□ -2.19
ROM1Q03395 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
ROM1Q03395 RNU4-83P-201ENST00000410863 133 ntBASIC1.35□□□□□ -2.19
ROM1Q03395 RPS26P5-201ENST00000418544 335 ntBASIC1.35□□□□□ -2.19
ROM1Q03395 SNORA40.13-201ENST00000516379 120 ntBASIC1.35□□□□□ -2.19
ROM1Q03395 MIR4500-201ENST00000579472 76 ntBASIC1.35□□□□□ -2.19
ROM1Q03395 BX248123.2-201ENST00000606318 124 ntBASIC1.35□□□□□ -2.19
ROM1Q03395 RNU6-1298P-201ENST00000362456 101 ntBASIC1.34□□□□□ -2.19
ROM1Q03395 Y_RNA.93-201ENST00000363066 109 ntBASIC1.34□□□□□ -2.19
ROM1Q03395 Y_RNA.95-201ENST00000363079 95 ntBASIC1.34□□□□□ -2.19
ROM1Q03395 SNORD26-201ENST00000384147 75 ntBASIC1.34□□□□□ -2.19
ROM1Q03395 SNORD38.2-201ENST00000384470 69 ntBASIC1.34□□□□□ -2.19
ROM1Q03395 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.34□□□□□ -2.19
ROM1Q03395 MTATP8P2-201ENST00000435212 202 ntBASIC1.34□□□□□ -2.19
ROM1Q03395 SPINT5P-201ENST00000448174 155 ntBASIC1.34□□□□□ -2.19
ROM1Q03395 AC109327.2-201ENST00000448339 378 ntBASIC1.34□□□□□ -2.19
ROM1Q03395 MTND5P40-201ENST00000559945 246 ntBASIC1.34□□□□□ -2.19
ROM1Q03395 AC027335.2-201ENST00000624030 375 ntBASIC1.34□□□□□ -2.19
ROM1Q03395 Y_RNA.466-201ENST00000384294 113 ntBASIC1.33□□□□□ -2.2
ROM1Q03395 Y_RNA.467-201ENST00000384297 102 ntBASIC1.33□□□□□ -2.2
ROM1Q03395 MIR504-201ENST00000385065 83 ntBASIC1.33□□□□□ -2.2
ROM1Q03395 MIR517C-201ENST00000385103 95 ntBASIC1.33□□□□□ -2.2
ROM1Q03395 SNORA26.9-201ENST00000391322 122 ntBASIC1.33□□□□□ -2.2
ROM1Q03395 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.33□□□□□ -2.2
ROM1Q03395 MIR548G-201ENST00000408442 89 ntBASIC1.33□□□□□ -2.2
ROM1Q03395 AC004941.2-201ENST00000427009 228 ntBASIC1.33□□□□□ -2.2
ROM1Q03395 RNU6-531P-201ENST00000516694 104 ntBASIC1.33□□□□□ -2.2
ROM1Q03395 AC019288.1-201ENST00000557918 224 ntBASIC1.33□□□□□ -2.2
ROM1Q03395 MIR4676-201ENST00000583078 72 ntBASIC1.33□□□□□ -2.2
ROM1Q03395 MIR4777-201ENST00000583710 86 ntBASIC1.33□□□□□ -2.2
ROM1Q03395 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
ROM1Q03395 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
ROM1Q03395 RNU6-369P-201ENST00000362515 102 ntBASIC1.32□□□□□ -2.2
ROM1Q03395 RNU6-60P-201ENST00000364792 103 ntBASIC1.32□□□□□ -2.2
ROM1Q03395 MIR125B2-201ENST00000385128 89 ntBASIC1.32□□□□□ -2.2
ROM1Q03395 MIR1304-201ENST00000408243 91 ntBASIC1.32□□□□□ -2.2
ROM1Q03395 AC023790.1-201ENST00000482174 347 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms