Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.48□□□□□ -2.49
HOXC5Q00444 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 RNU1-141P-201ENST00000364623 158 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 RNU6-728P-201ENST00000365375 104 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 RNU6-480P-201ENST00000384332 107 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 MIR635-201ENST00000384830 98 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 MIR519A1-201ENST00000385257 85 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
HOXC5Q00444 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 AL603914.1-201ENST00000401964 204 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 RNA5SP127-201ENST00000411051 133 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 AC093423.1-201ENST00000440817 142 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 RBMX2P4-201ENST00000441256 376 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.49□□□□□ -2.49
HOXC5Q00444 MTND5P22-201ENST00000458380 195 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 TRBVB-201ENST00000477100 408 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 AC114755.3-201ENST00000481111 251 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 RNU6-570P-201ENST00000517051 105 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 IGLVI-20-201ENST00000519296 130 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 MTND5P40-201ENST00000559945 246 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 MIR548AG2-201ENST00000581228 64 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 U6atac.1-201ENST00000616025 117 ntBASIC-0.49□□□□□ -2.49
HOXC5Q00444 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.5□□□□□ -2.49
HOXC5Q00444 AL022718.1-201ENST00000412004 84 ntBASIC-0.5□□□□□ -2.49
HOXC5Q00444 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.5□□□□□ -2.49
HOXC5Q00444 SNORD116-25-201ENST00000516517 92 ntBASIC-0.5□□□□□ -2.49
HOXC5Q00444 RNU6-175P-201ENST00000516896 107 ntBASIC-0.5□□□□□ -2.49
HOXC5Q00444 MIR8064-201ENST00000612863 90 ntBASIC-0.5□□□□□ -2.49
HOXC5Q00444 MIR6779-201ENST00000617283 64 ntBASIC-0.5□□□□□ -2.49
HOXC5Q00444 uc_338.36-201ENST00000622331 158 ntBASIC-0.5□□□□□ -2.49
HOXC5Q00444 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.5□□□□□ -2.49
HOXC5Q00444 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 RNA5SP98-201ENST00000363158 137 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 RNU6-770P-201ENST00000363929 105 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 MIR329-2-201ENST00000385029 84 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 RNU7-195P-201ENST00000458793 62 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 RNU7-13P-201ENST00000516413 62 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 RNU2-35P-201ENST00000516446 142 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 MIR548AE1-201ENST00000583292 70 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 MIR548AZ-201ENST00000616567 95 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.51□□□□□ -2.49
HOXC5Q00444 SNORA25.7-201ENST00000364375 127 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 SNORD42.2-201ENST00000365570 69 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 MIR539-201ENST00000365690 78 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 MIR181B2-201ENST00000385004 89 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 MIR519E-201ENST00000385075 84 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 SNORA79-201ENST00000408376 140 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 SNORD63B-201ENST00000411005 70 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 RNA5SP236-201ENST00000516169 116 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 SNORA40.15-201ENST00000516884 107 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.52□□□□□ -2.49
HOXC5Q00444 AL442663.2-201ENST00000554385 511 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 MIR4500-201ENST00000579472 76 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 AC069503.3-201ENST00000618674 145 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 AL365265.1-201ENST00000621045 234 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 AC090971.5-201ENST00000621102 293 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 AL391099.1-201ENST00000624635 187 ntBASIC-0.52□□□□□ -2.49
HOXC5Q00444 MIR369-201ENST00000362155 70 ntBASIC-0.53□□□□□ -2.49
HOXC5Q00444 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.53□□□□□ -2.49
HOXC5Q00444 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.53□□□□□ -2.49
HOXC5Q00444 RNU4-17P-201ENST00000365598 141 ntBASIC-0.53□□□□□ -2.49
HOXC5Q00444 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.53□□□□□ -2.49
HOXC5Q00444 RNU6-524P-201ENST00000384270 107 ntBASIC-0.53□□□□□ -2.49
HOXC5Q00444 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.53□□□□□ -2.49
HOXC5Q00444 SNORA32.3-201ENST00000384772 121 ntBASIC-0.53□□□□□ -2.49
HOXC5Q00444 MIR206-201ENST00000384872 86 ntBASIC-0.53□□□□□ -2.49
HOXC5Q00444 RNU6-101P-201ENST00000410323 104 ntBASIC-0.53□□□□□ -2.49
HOXC5Q00444 RNU7-48P-201ENST00000458875 63 ntBASIC-0.53□□□□□ -2.49
HOXC5Q00444 RNU7-74P-201ENST00000459104 62 ntBASIC-0.53□□□□□ -2.49
HOXC5Q00444 RNY3P15-201ENST00000516297 97 ntBASIC-0.53□□□□□ -2.49
HOXC5Q00444 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.53□□□□□ -2.49
HOXC5Q00444 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.53□□□□□ -2.49
HOXC5Q00444 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.54□□□□□ -2.5
HOXC5Q00444 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.54□□□□□ -2.5
HOXC5Q00444 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.54□□□□□ -2.5
HOXC5Q00444 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.54□□□□□ -2.5
HOXC5Q00444 RNU6-923P-201ENST00000364753 107 ntBASIC-0.54□□□□□ -2.5
HOXC5Q00444 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.54□□□□□ -2.5
HOXC5Q00444 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.54□□□□□ -2.5
HOXC5Q00444 MIR9-2-201ENST00000384838 87 ntBASIC-0.54□□□□□ -2.5
HOXC5Q00444 MIR548I2-201ENST00000408348 149 ntBASIC-0.54□□□□□ -2.5
HOXC5Q00444 RNU6-875P-201ENST00000516488 106 ntBASIC-0.54□□□□□ -2.5
HOXC5Q00444 RNA5SP66-201ENST00000517178 101 ntBASIC-0.54□□□□□ -2.5
HOXC5Q00444 MIR4282-201ENST00000583613 67 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms