Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.18□□□□□ -2.44
IRX3P78415 SNORA25.7-201ENST00000364375 127 ntBASIC-0.18□□□□□ -2.44
IRX3P78415 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.18□□□□□ -2.44
IRX3P78415 MIR1302-6-201ENST00000408466 90 ntBASIC-0.18□□□□□ -2.44
IRX3P78415 AL022718.1-201ENST00000412004 84 ntBASIC-0.18□□□□□ -2.44
IRX3P78415 AC244505.6-201ENST00000452829 130 ntBASIC-0.18□□□□□ -2.44
IRX3P78415 RPL39P34-201ENST00000477141 156 ntBASIC-0.18□□□□□ -2.44
IRX3P78415 SNORA25.16-201ENST00000516741 121 ntBASIC-0.18□□□□□ -2.44
IRX3P78415 AC020661.2-201ENST00000560114 134 ntBASIC-0.18□□□□□ -2.44
IRX3P78415 AC138869.1-201ENST00000568623 124 ntBASIC-0.18□□□□□ -2.44
IRX3P78415 MTND5P34-201ENST00000568888 325 ntBASIC-0.18□□□□□ -2.44
IRX3P78415 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.18□□□□□ -2.44
IRX3P78415 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.19□□□□□ -2.44
IRX3P78415 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.19□□□□□ -2.44
IRX3P78415 SNORA33.2-201ENST00000365413 134 ntBASIC-0.19□□□□□ -2.44
IRX3P78415 MTND5P22-201ENST00000458380 195 ntBASIC-0.19□□□□□ -2.44
IRX3P78415 HAR1A.1-201ENST00000459583 118 ntBASIC-0.19□□□□□ -2.44
IRX3P78415 MIR548H5-201ENST00000580314 60 ntBASIC-0.19□□□□□ -2.44
IRX3P78415 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.2□□□□□ -2.44
IRX3P78415 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.2□□□□□ -2.44
IRX3P78415 RNU6-578P-201ENST00000390980 103 ntBASIC-0.2□□□□□ -2.44
IRX3P78415 RNU7-113P-201ENST00000459273 62 ntBASIC-0.2□□□□□ -2.44
IRX3P78415 RNU6-561P-201ENST00000516222 102 ntBASIC-0.2□□□□□ -2.44
IRX3P78415 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.2□□□□□ -2.44
IRX3P78415 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.2□□□□□ -2.44
IRX3P78415 AL442663.2-201ENST00000554385 511 ntBASIC-0.2□□□□□ -2.44
IRX3P78415 SNORA70.25-201ENST00000612741 95 ntBASIC-0.2□□□□□ -2.44
IRX3P78415 AL442067.1-201ENST00000613261 223 ntBASIC-0.2□□□□□ -2.44
IRX3P78415 AC073869.9-201ENST00000641610 120 ntBASIC-0.2□□□□□ -2.44
IRX3P78415 SNORD114-10-201ENST00000363409 72 ntBASIC-0.21□□□□□ -2.44
IRX3P78415 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.21□□□□□ -2.44
IRX3P78415 RNU6-923P-201ENST00000364753 107 ntBASIC-0.21□□□□□ -2.44
IRX3P78415 MIR1265-201ENST00000408444 86 ntBASIC-0.21□□□□□ -2.44
IRX3P78415 RNA5SP144-201ENST00000410846 116 ntBASIC-0.21□□□□□ -2.44
IRX3P78415 RNU7-159P-201ENST00000459284 62 ntBASIC-0.21□□□□□ -2.44
IRX3P78415 MIR3925-201ENST00000584674 77 ntBASIC-0.21□□□□□ -2.44
IRX3P78415 AC011603.4-201ENST00000611325 277 ntBASIC-0.21□□□□□ -2.44
IRX3P78415 RNU6-161P-201ENST00000363051 106 ntBASIC-0.22□□□□□ -2.44
IRX3P78415 RNA5SP133-201ENST00000363368 119 ntBASIC-0.22□□□□□ -2.44
IRX3P78415 SNORD114-11-201ENST00000363738 75 ntBASIC-0.22□□□□□ -2.44
IRX3P78415 RNU6-726P-201ENST00000364680 107 ntBASIC-0.22□□□□□ -2.44
IRX3P78415 MIR501-201ENST00000390204 84 ntBASIC-0.22□□□□□ -2.44
IRX3P78415 RNA5SP163-201ENST00000410304 99 ntBASIC-0.22□□□□□ -2.44
IRX3P78415 RNU6-531P-201ENST00000516694 104 ntBASIC-0.22□□□□□ -2.44
IRX3P78415 AC044792.1-201ENST00000593294 196 ntBASIC-0.22□□□□□ -2.44
IRX3P78415 MIR8062-201ENST00000621515 85 ntBASIC-0.22□□□□□ -2.44
IRX3P78415 MTND5P32-201ENST00000560711 1802 ntBASIC-0.22□□□□□ -2.45
IRX3P78415 RNU6-429P-201ENST00000384582 108 ntBASIC-0.23□□□□□ -2.45
IRX3P78415 MIR548L-201ENST00000408303 86 ntBASIC-0.23□□□□□ -2.45
IRX3P78415 RNU6-651P-201ENST00000411040 105 ntBASIC-0.23□□□□□ -2.45
IRX3P78415 MTND1P19-201ENST00000511780 315 ntBASIC-0.23□□□□□ -2.45
IRX3P78415 AL117351.2-201ENST00000513571 157 ntBASIC-0.23□□□□□ -2.45
IRX3P78415 IGLVI-20-201ENST00000519296 130 ntBASIC-0.23□□□□□ -2.45
IRX3P78415 AL356055.1-201ENST00000602528 446 ntBASIC-0.23□□□□□ -2.45
IRX3P78415 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.23□□□□□ -2.45
IRX3P78415 AL162376.1-201ENST00000624117 175 ntBASIC-0.23□□□□□ -2.45
IRX3P78415 SNORA18.1-201ENST00000363418 128 ntBASIC-0.24□□□□□ -2.45
IRX3P78415 SNORD115-24-201ENST00000363528 82 ntBASIC-0.24□□□□□ -2.45
IRX3P78415 RNY1P2-201ENST00000364820 117 ntBASIC-0.24□□□□□ -2.45
IRX3P78415 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.24□□□□□ -2.45
IRX3P78415 SNORD114-12-201ENST00000365400 75 ntBASIC-0.24□□□□□ -2.45
IRX3P78415 RNU6-643P-201ENST00000384018 107 ntBASIC-0.24□□□□□ -2.45
IRX3P78415 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
IRX3P78415 RNU7-165P-201ENST00000458864 60 ntBASIC-0.24□□□□□ -2.45
IRX3P78415 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.24□□□□□ -2.45
IRX3P78415 RNA5SP33-201ENST00000516687 98 ntBASIC-0.24□□□□□ -2.45
IRX3P78415 MIR4436A-201ENST00000585278 85 ntBASIC-0.24□□□□□ -2.45
IRX3P78415 MIR8064-201ENST00000612863 90 ntBASIC-0.24□□□□□ -2.45
IRX3P78415 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.24□□□□□ -2.45
IRX3P78415 SNORD114-31-201ENST00000363219 75 ntBASIC-0.25□□□□□ -2.45
IRX3P78415 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.25□□□□□ -2.45
IRX3P78415 RNU6-46P-201ENST00000383860 107 ntBASIC-0.25□□□□□ -2.45
IRX3P78415 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.25□□□□□ -2.45
IRX3P78415 MIR196A2-201ENST00000385189 110 ntBASIC-0.25□□□□□ -2.45
IRX3P78415 MIR214-201ENST00000385214 110 ntBASIC-0.25□□□□□ -2.45
IRX3P78415 MIR548H3-201ENST00000408771 118 ntBASIC-0.25□□□□□ -2.45
IRX3P78415 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.25□□□□□ -2.45
IRX3P78415 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.25□□□□□ -2.45
IRX3P78415 MIR3681-201ENST00000580089 72 ntBASIC-0.25□□□□□ -2.45
IRX3P78415 MIR548AD-201ENST00000584780 82 ntBASIC-0.25□□□□□ -2.45
IRX3P78415 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.25□□□□□ -2.45
IRX3P78415 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.26□□□□□ -2.45
IRX3P78415 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.26□□□□□ -2.45
IRX3P78415 RNA5SP245-201ENST00000364239 121 ntBASIC-0.26□□□□□ -2.45
IRX3P78415 RNU6-480P-201ENST00000384332 107 ntBASIC-0.26□□□□□ -2.45
IRX3P78415 SNORD41.1-201ENST00000391000 69 ntBASIC-0.26□□□□□ -2.45
IRX3P78415 MTATP6P21-201ENST00000440681 189 ntBASIC-0.26□□□□□ -2.45
IRX3P78415 MTCYBP6-201ENST00000441810 138 ntBASIC-0.26□□□□□ -2.45
IRX3P78415 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.26□□□□□ -2.45
IRX3P78415 RNA5SP169-201ENST00000517268 117 ntBASIC-0.26□□□□□ -2.45
IRX3P78415 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.26□□□□□ -2.45
IRX3P78415 AC138749.4-201ENST00000563970 127 ntBASIC-0.26□□□□□ -2.45
IRX3P78415 U6.109-201ENST00000636749 87 ntBASIC-0.26□□□□□ -2.45
IRX3P78415 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.27□□□□□ -2.45
IRX3P78415 MIR655-201ENST00000362159 97 ntBASIC-0.27□□□□□ -2.45
IRX3P78415 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.27□□□□□ -2.45
IRX3P78415 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.27□□□□□ -2.45
IRX3P78415 RNU4-16P-201ENST00000364737 141 ntBASIC-0.27□□□□□ -2.45
IRX3P78415 RNU6-702P-201ENST00000364982 107 ntBASIC-0.27□□□□□ -2.45
IRX3P78415 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms