Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 SNORA25.15-201ENST00000516487 89 ntBASIC1.6□□□□□ -2.15
CLK3P49761 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.6□□□□□ -2.15
CLK3P49761 MIR5588-201ENST00000581890 63 ntBASIC1.6□□□□□ -2.15
CLK3P49761 AC103810.7-201ENST00000607821 91 ntBASIC1.6□□□□□ -2.15
CLK3P49761 SNORD38B-202ENST00000625943 69 ntBASIC1.6□□□□□ -2.15
CLK3P49761 Y_RNA.98-201ENST00000363109 102 ntBASIC1.59□□□□□ -2.15
CLK3P49761 SNORD1A-201ENST00000364968 72 ntBASIC1.59□□□□□ -2.15
CLK3P49761 RNU6-1321P-201ENST00000390905 107 ntBASIC1.59□□□□□ -2.15
CLK3P49761 MIR548G-201ENST00000408442 89 ntBASIC1.59□□□□□ -2.15
CLK3P49761 RNA5SP395-201ENST00000516567 118 ntBASIC1.59□□□□□ -2.15
CLK3P49761 RNU6-267P-201ENST00000516714 103 ntBASIC1.59□□□□□ -2.15
CLK3P49761 MIR6845-201ENST00000613182 61 ntBASIC1.59□□□□□ -2.15
CLK3P49761 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CLK3P49761 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CLK3P49761 SNORD33-201ENST00000362761 85 ntBASIC1.58□□□□□ -2.16
CLK3P49761 RNU6-1244P-201ENST00000363614 108 ntBASIC1.58□□□□□ -2.16
CLK3P49761 SNORD38.2-201ENST00000384470 69 ntBASIC1.58□□□□□ -2.16
CLK3P49761 Y_RNA.567-201ENST00000384736 106 ntBASIC1.58□□□□□ -2.16
CLK3P49761 MIR504-201ENST00000385065 83 ntBASIC1.58□□□□□ -2.16
CLK3P49761 RNU7-48P-201ENST00000458875 63 ntBASIC1.58□□□□□ -2.16
CLK3P49761 RNU7-171P-201ENST00000459581 62 ntBASIC1.58□□□□□ -2.16
CLK3P49761 AC079140.2-201ENST00000506193 142 ntBASIC1.58□□□□□ -2.16
CLK3P49761 RNU7-41P-201ENST00000515917 61 ntBASIC1.58□□□□□ -2.16
CLK3P49761 RNU6-90P-201ENST00000606352 106 ntBASIC1.58□□□□□ -2.16
CLK3P49761 SEPT14P17-201ENST00000617978 177 ntBASIC1.58□□□□□ -2.16
CLK3P49761 AC025521.1-201ENST00000621624 286 ntBASIC1.58□□□□□ -2.16
CLK3P49761 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.58□□□□□ -2.16
CLK3P49761 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.58□□□□□ -2.16
CLK3P49761 MIR302D-201ENST00000362275 68 ntBASIC1.57□□□□□ -2.16
CLK3P49761 RNA5SP48-201ENST00000363969 126 ntBASIC1.57□□□□□ -2.16
CLK3P49761 RNY1P13-201ENST00000365030 105 ntBASIC1.57□□□□□ -2.16
CLK3P49761 RNY1P4-201ENST00000384595 115 ntBASIC1.57□□□□□ -2.16
CLK3P49761 RNU1-78P-201ENST00000391248 165 ntBASIC1.57□□□□□ -2.16
CLK3P49761 MIR1255A-201ENST00000408338 113 ntBASIC1.57□□□□□ -2.16
CLK3P49761 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.57□□□□□ -2.16
CLK3P49761 RNU6-548P-201ENST00000517083 115 ntBASIC1.57□□□□□ -2.16
CLK3P49761 MIR4422-201ENST00000581938 83 ntBASIC1.57□□□□□ -2.16
CLK3P49761 AC105081.1-201ENST00000617727 106 ntBASIC1.57□□□□□ -2.16
CLK3P49761 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLK3P49761 RNU6-787P-201ENST00000384032 107 ntBASIC1.56□□□□□ -2.16
CLK3P49761 Y_RNA.426-201ENST00000384068 113 ntBASIC1.56□□□□□ -2.16
CLK3P49761 MIR1289-2-201ENST00000408360 111 ntBASIC1.56□□□□□ -2.16
CLK3P49761 AC009474.2-201ENST00000451383 136 ntBASIC1.56□□□□□ -2.16
CLK3P49761 RNU6-250P-201ENST00000516958 103 ntBASIC1.56□□□□□ -2.16
CLK3P49761 AC141846.1-201ENST00000568348 142 ntBASIC1.56□□□□□ -2.16
CLK3P49761 MIR4666B-201ENST00000578142 81 ntBASIC1.56□□□□□ -2.16
CLK3P49761 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.56□□□□□ -2.16
CLK3P49761 AP001362.1-201ENST00000625165 124 ntBASIC1.56□□□□□ -2.16
CLK3P49761 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
CLK3P49761 Y_RNA.173-201ENST00000363776 113 ntBASIC1.55□□□□□ -2.16
CLK3P49761 RNU6-1237P-201ENST00000384777 107 ntBASIC1.55□□□□□ -2.16
CLK3P49761 RNA5SP237-201ENST00000410414 113 ntBASIC1.55□□□□□ -2.16
CLK3P49761 RNA5SP225-201ENST00000410874 135 ntBASIC1.55□□□□□ -2.16
CLK3P49761 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.55□□□□□ -2.16
CLK3P49761 SPINT5P-201ENST00000448174 155 ntBASIC1.55□□□□□ -2.16
CLK3P49761 SNORD111.1-201ENST00000516421 86 ntBASIC1.55□□□□□ -2.16
CLK3P49761 MIR3937-201ENST00000580135 106 ntBASIC1.55□□□□□ -2.16
CLK3P49761 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.55□□□□□ -2.16
CLK3P49761 AL662814.1-201ENST00000617364 121 ntBASIC1.55□□□□□ -2.16
CLK3P49761 AC012676.2-201ENST00000619258 186 ntBASIC1.55□□□□□ -2.16
CLK3P49761 RNU6-633P-201ENST00000362612 103 ntBASIC1.54□□□□□ -2.16
CLK3P49761 RNU6-1065P-201ENST00000384513 106 ntBASIC1.54□□□□□ -2.16
CLK3P49761 SNORD41-201ENST00000386967 70 ntBASIC1.54□□□□□ -2.16
CLK3P49761 AC027119.1-201ENST00000440877 241 ntBASIC1.54□□□□□ -2.16
CLK3P49761 AC019176.1-201ENST00000518519 225 ntBASIC1.54□□□□□ -2.16
CLK3P49761 AL357312.1-201ENST00000603879 298 ntBASIC1.54□□□□□ -2.16
CLK3P49761 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CLK3P49761 RNU6-509P-201ENST00000363519 107 ntBASIC1.53□□□□□ -2.16
CLK3P49761 RNU6-949P-201ENST00000384040 107 ntBASIC1.53□□□□□ -2.16
CLK3P49761 Y_RNA.609-201ENST00000410669 89 ntBASIC1.53□□□□□ -2.16
CLK3P49761 AC244023.1-201ENST00000426884 112 ntBASIC1.53□□□□□ -2.16
CLK3P49761 AC245517.4-201ENST00000448601 281 ntBASIC1.53□□□□□ -2.16
CLK3P49761 RNU1-98P-201ENST00000458992 160 ntBASIC1.53□□□□□ -2.16
CLK3P49761 snoU13.2-201ENST00000459201 104 ntBASIC1.53□□□□□ -2.16
CLK3P49761 RNA5SP445-201ENST00000515889 115 ntBASIC1.53□□□□□ -2.16
CLK3P49761 MTND5P40-201ENST00000559945 246 ntBASIC1.53□□□□□ -2.16
CLK3P49761 AC133485.1-201ENST00000567176 124 ntBASIC1.53□□□□□ -2.16
CLK3P49761 AC242498.1-201ENST00000604134 111 ntBASIC1.53□□□□□ -2.16
CLK3P49761 PRELID3BP2-201ENST00000605362 201 ntBASIC1.53□□□□□ -2.16
CLK3P49761 MIR8081-201ENST00000611533 95 ntBASIC1.53□□□□□ -2.16
CLK3P49761 HSBP1P2-201ENST00000299671 229 ntBASIC1.52□□□□□ -2.17
CLK3P49761 Y_RNA.4-201ENST00000362333 112 ntBASIC1.52□□□□□ -2.17
CLK3P49761 RNU6-1125P-201ENST00000363601 107 ntBASIC1.52□□□□□ -2.17
CLK3P49761 RNY1P2-201ENST00000364820 117 ntBASIC1.52□□□□□ -2.17
CLK3P49761 Y_RNA.437-201ENST00000384113 113 ntBASIC1.52□□□□□ -2.17
CLK3P49761 RNU6-480P-201ENST00000384332 107 ntBASIC1.52□□□□□ -2.17
CLK3P49761 RNU6-279P-201ENST00000391297 101 ntBASIC1.52□□□□□ -2.17
CLK3P49761 Y_RNA.611-201ENST00000410682 108 ntBASIC1.52□□□□□ -2.17
CLK3P49761 AL161932.1-201ENST00000437408 146 ntBASIC1.52□□□□□ -2.17
CLK3P49761 MIR3192-201ENST00000584920 77 ntBASIC1.52□□□□□ -2.17
CLK3P49761 MIR548BB-201ENST00000626714 66 ntBASIC1.52□□□□□ -2.17
CLK3P49761 AC006160.2-201ENST00000637708 154 ntBASIC1.52□□□□□ -2.17
CLK3P49761 RNU6-922P-201ENST00000516753 99 ntBASIC1.51□□□□□ -2.17
CLK3P49761 AL513043.2-201ENST00000573941 143 ntBASIC1.51□□□□□ -2.17
CLK3P49761 MIR4298-201ENST00000584380 73 ntBASIC1.51□□□□□ -2.17
CLK3P49761 AL096861.1-201ENST00000610899 123 ntBASIC1.51□□□□□ -2.17
CLK3P49761 MIR7843-201ENST00000622274 79 ntBASIC1.51□□□□□ -2.17
CLK3P49761 Y_RNA.191-201ENST00000363972 113 ntBASIC1.5□□□□□ -2.17
CLK3P49761 Y_RNA.313-201ENST00000365095 103 ntBASIC1.5□□□□□ -2.17
CLK3P49761 RNU6-396P-201ENST00000365369 105 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 217.8 ms