Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 AC242498.1-201ENST00000604134 111 ntBASIC1.32□□□□□ -2.2
THBS3P49746 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.32□□□□□ -2.2
THBS3P49746 SEPT14P17-201ENST00000617978 177 ntBASIC1.32□□□□□ -2.2
THBS3P49746 RNU6-573P-201ENST00000383938 106 ntBASIC1.31□□□□□ -2.2
THBS3P49746 RNU6-887P-201ENST00000410660 100 ntBASIC1.31□□□□□ -2.2
THBS3P49746 RNA5SP247-201ENST00000411181 105 ntBASIC1.31□□□□□ -2.2
THBS3P49746 AC141846.1-201ENST00000568348 142 ntBASIC1.31□□□□□ -2.2
THBS3P49746 MIR4713-201ENST00000582691 75 ntBASIC1.31□□□□□ -2.2
THBS3P49746 PRELID3BP2-201ENST00000605362 201 ntBASIC1.31□□□□□ -2.2
THBS3P49746 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.31□□□□□ -2.2
THBS3P49746 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
THBS3P49746 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
THBS3P49746 SNORD114-10-201ENST00000363409 72 ntBASIC1.3□□□□□ -2.2
THBS3P49746 RNU6-1163P-201ENST00000364516 107 ntBASIC1.3□□□□□ -2.2
THBS3P49746 RNU6-865P-201ENST00000364772 107 ntBASIC1.3□□□□□ -2.2
THBS3P49746 RPS29P28-201ENST00000446439 141 ntBASIC1.3□□□□□ -2.2
THBS3P49746 AC023790.1-201ENST00000482174 347 ntBASIC1.3□□□□□ -2.2
THBS3P49746 RNU6-947P-201ENST00000516264 106 ntBASIC1.3□□□□□ -2.2
THBS3P49746 MIR4285-201ENST00000581001 85 ntBASIC1.3□□□□□ -2.2
THBS3P49746 RNU6-86P-201ENST00000606534 107 ntBASIC1.3□□□□□ -2.2
THBS3P49746 AL662814.1-201ENST00000617364 121 ntBASIC1.3□□□□□ -2.2
THBS3P49746 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.3□□□□□ -2.2
THBS3P49746 MIR378A-201ENST00000362177 66 ntBASIC1.29□□□□□ -2.2
THBS3P49746 SNORD38.1-201ENST00000363863 68 ntBASIC1.29□□□□□ -2.2
THBS3P49746 U8.15-201ENST00000390947 134 ntBASIC1.29□□□□□ -2.2
THBS3P49746 RNU6-972P-201ENST00000391208 107 ntBASIC1.29□□□□□ -2.2
THBS3P49746 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.29□□□□□ -2.2
THBS3P49746 RNA5SP237-201ENST00000410414 113 ntBASIC1.29□□□□□ -2.2
THBS3P49746 AC027119.1-201ENST00000440877 241 ntBASIC1.29□□□□□ -2.2
THBS3P49746 HSPE1P24-201ENST00000450782 238 ntBASIC1.29□□□□□ -2.2
THBS3P49746 RNU7-48P-201ENST00000458875 63 ntBASIC1.29□□□□□ -2.2
THBS3P49746 AC005908.1-201ENST00000468701 347 ntBASIC1.29□□□□□ -2.2
THBS3P49746 MIR4498-201ENST00000577599 66 ntBASIC1.29□□□□□ -2.2
THBS3P49746 AL357312.1-201ENST00000603879 298 ntBASIC1.29□□□□□ -2.2
THBS3P49746 AC103810.7-201ENST00000607821 91 ntBASIC1.29□□□□□ -2.2
THBS3P49746 GHRLOS.1-201ENST00000610995 70 ntBASIC1.29□□□□□ -2.2
THBS3P49746 MIR8074-201ENST00000615081 81 ntBASIC1.29□□□□□ -2.2
THBS3P49746 MIR8063-201ENST00000621930 81 ntBASIC1.29□□□□□ -2.2
THBS3P49746 MIR1245B-201ENST00000636115 69 ntBASIC1.29□□□□□ -2.2
THBS3P49746 Y_RNA.73-201ENST00000362910 113 ntBASIC1.28□□□□□ -2.2
THBS3P49746 Y_RNA.96-201ENST00000363092 109 ntBASIC1.28□□□□□ -2.2
THBS3P49746 RNU6-820P-201ENST00000384273 107 ntBASIC1.28□□□□□ -2.2
THBS3P49746 RNU6-813P-201ENST00000384691 107 ntBASIC1.28□□□□□ -2.2
THBS3P49746 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.28□□□□□ -2.2
THBS3P49746 MIR4439-201ENST00000583746 80 ntBASIC1.28□□□□□ -2.2
THBS3P49746 BX248123.2-201ENST00000606318 124 ntBASIC1.28□□□□□ -2.2
THBS3P49746 AC103810.8-201ENST00000607347 118 ntBASIC1.28□□□□□ -2.2
THBS3P49746 RNU6-1152P-201ENST00000384576 107 ntBASIC1.27□□□□□ -2.21
THBS3P49746 MIR588-201ENST00000384900 83 ntBASIC1.27□□□□□ -2.21
THBS3P49746 MIR548G-201ENST00000408442 89 ntBASIC1.27□□□□□ -2.21
THBS3P49746 RNU6-447P-201ENST00000410293 104 ntBASIC1.27□□□□□ -2.21
THBS3P49746 RNU6-1118P-201ENST00000410382 104 ntBASIC1.27□□□□□ -2.21
THBS3P49746 RNU6-1076P-201ENST00000410397 104 ntBASIC1.27□□□□□ -2.21
THBS3P49746 RNU6-355P-201ENST00000410427 104 ntBASIC1.27□□□□□ -2.21
THBS3P49746 RNU6-791P-201ENST00000410467 104 ntBASIC1.27□□□□□ -2.21
THBS3P49746 RNU6-705P-201ENST00000410601 104 ntBASIC1.27□□□□□ -2.21
THBS3P49746 RNU6-1100P-201ENST00000410691 104 ntBASIC1.27□□□□□ -2.21
THBS3P49746 RNU6-860P-201ENST00000410860 104 ntBASIC1.27□□□□□ -2.21
THBS3P49746 RNU6-1217P-201ENST00000411276 104 ntBASIC1.27□□□□□ -2.21
THBS3P49746 RNU6-785P-201ENST00000411324 104 ntBASIC1.27□□□□□ -2.21
THBS3P49746 snoU13.2-201ENST00000459201 104 ntBASIC1.27□□□□□ -2.21
THBS3P49746 AC008834.1-201ENST00000511612 175 ntBASIC1.27□□□□□ -2.21
THBS3P49746 AC019176.1-201ENST00000518519 225 ntBASIC1.27□□□□□ -2.21
THBS3P49746 snoU13.31-201ENST00000607291 104 ntBASIC1.27□□□□□ -2.21
THBS3P49746 U6.90-201ENST00000614007 104 ntBASIC1.27□□□□□ -2.21
THBS3P49746 MIR6740-201ENST00000618268 113 ntBASIC1.27□□□□□ -2.21
THBS3P49746 U6.70-201ENST00000620287 104 ntBASIC1.27□□□□□ -2.21
THBS3P49746 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.27□□□□□ -2.21
THBS3P49746 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
THBS3P49746 RNU6-1244P-201ENST00000363614 108 ntBASIC1.26□□□□□ -2.21
THBS3P49746 RNY1P1-201ENST00000364372 112 ntBASIC1.26□□□□□ -2.21
THBS3P49746 SNORD58A-201ENST00000383875 65 ntBASIC1.26□□□□□ -2.21
THBS3P49746 RNU6-949P-201ENST00000384040 107 ntBASIC1.26□□□□□ -2.21
THBS3P49746 RNU6-205P-201ENST00000390858 107 ntBASIC1.26□□□□□ -2.21
THBS3P49746 MIR934-201ENST00000401241 83 ntBASIC1.26□□□□□ -2.21
THBS3P49746 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.26□□□□□ -2.21
THBS3P49746 RNU4-62P-201ENST00000410125 130 ntBASIC1.26□□□□□ -2.21
THBS3P49746 RNU6-402P-201ENST00000410678 103 ntBASIC1.26□□□□□ -2.21
THBS3P49746 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.26□□□□□ -2.21
THBS3P49746 SPINT5P-201ENST00000448174 155 ntBASIC1.26□□□□□ -2.21
THBS3P49746 AC022137.1-201ENST00000483735 151 ntBASIC1.26□□□□□ -2.21
THBS3P49746 RNU6-267P-201ENST00000516714 103 ntBASIC1.26□□□□□ -2.21
THBS3P49746 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.26□□□□□ -2.21
THBS3P49746 SNORD53B-201ENST00000577887 78 ntBASIC1.26□□□□□ -2.21
THBS3P49746 MIR4303-201ENST00000581299 66 ntBASIC1.26□□□□□ -2.21
THBS3P49746 AC020891.4-201ENST00000605745 93 ntBASIC1.26□□□□□ -2.21
THBS3P49746 uc_338.6-201ENST00000613544 171 ntBASIC1.26□□□□□ -2.21
THBS3P49746 AP001362.1-201ENST00000625165 124 ntBASIC1.26□□□□□ -2.21
THBS3P49746 MIR302D-201ENST00000362275 68 ntBASIC1.25□□□□□ -2.21
THBS3P49746 Y_RNA.98-201ENST00000363109 102 ntBASIC1.25□□□□□ -2.21
THBS3P49746 SNORD116-10-201ENST00000363791 102 ntBASIC1.25□□□□□ -2.21
THBS3P49746 RNU6-396P-201ENST00000365369 105 ntBASIC1.25□□□□□ -2.21
THBS3P49746 Y_RNA.567-201ENST00000384736 106 ntBASIC1.25□□□□□ -2.21
THBS3P49746 MIR563-201ENST00000385080 79 ntBASIC1.25□□□□□ -2.21
THBS3P49746 MIR517C-201ENST00000385103 95 ntBASIC1.25□□□□□ -2.21
THBS3P49746 MIR1304-201ENST00000408243 91 ntBASIC1.25□□□□□ -2.21
THBS3P49746 MIR1185-1-201ENST00000408598 86 ntBASIC1.25□□□□□ -2.21
THBS3P49746 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.25□□□□□ -2.21
THBS3P49746 RNU6-1053P-201ENST00000515930 101 ntBASIC1.25□□□□□ -2.21
THBS3P49746 AP003716.2-201ENST00000528260 108 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms