Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 Y_RNA.644-201ENST00000459006 113 ntBASIC0.42□□□□□ -2.34
HADHAP40939 RNU6-863P-201ENST00000515989 104 ntBASIC0.42□□□□□ -2.34
HADHAP40939 RNU6-1219P-201ENST00000516143 112 ntBASIC0.42□□□□□ -2.34
HADHAP40939 SNORA25.12-201ENST00000516202 82 ntBASIC0.42□□□□□ -2.34
HADHAP40939 Y_RNA.674-201ENST00000516362 113 ntBASIC0.42□□□□□ -2.34
HADHAP40939 RNU6-1258P-201ENST00000516911 111 ntBASIC0.42□□□□□ -2.34
HADHAP40939 RNU7-35P-201ENST00000517174 62 ntBASIC0.42□□□□□ -2.34
HADHAP40939 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
HADHAP40939 Y_RNA.188-201ENST00000363952 111 ntBASIC0.41□□□□□ -2.34
HADHAP40939 RNU6-690P-201ENST00000365242 106 ntBASIC0.41□□□□□ -2.34
HADHAP40939 Y_RNA.552-201ENST00000384665 112 ntBASIC0.41□□□□□ -2.34
HADHAP40939 MIR518A1-201ENST00000385068 85 ntBASIC0.41□□□□□ -2.34
HADHAP40939 AL078595.1-201ENST00000404458 226 ntBASIC0.41□□□□□ -2.34
HADHAP40939 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
HADHAP40939 RNU7-79P-201ENST00000516082 62 ntBASIC0.41□□□□□ -2.34
HADHAP40939 RNU6-1099P-201ENST00000363533 107 ntBASIC0.4□□□□□ -2.35
HADHAP40939 RNU6-1082P-201ENST00000364574 107 ntBASIC0.4□□□□□ -2.35
HADHAP40939 RNA5SP517-201ENST00000364724 117 ntBASIC0.4□□□□□ -2.35
HADHAP40939 Y_RNA.700-201ENST00000516806 100 ntBASIC0.4□□□□□ -2.35
HADHAP40939 Y_RNA.171-201ENST00000363760 102 ntBASIC0.39□□□□□ -2.35
HADHAP40939 Y_RNA.274-201ENST00000364714 101 ntBASIC0.39□□□□□ -2.35
HADHAP40939 Y_RNA.297-201ENST00000364950 91 ntBASIC0.39□□□□□ -2.35
HADHAP40939 Y_RNA.617-201ENST00000410920 90 ntBASIC0.39□□□□□ -2.35
HADHAP40939 Y_RNA.793-201ENST00000411222 111 ntBASIC0.39□□□□□ -2.35
HADHAP40939 AL512326.2-201ENST00000426359 151 ntBASIC0.39□□□□□ -2.35
HADHAP40939 RNU7-121P-201ENST00000516604 62 ntBASIC0.39□□□□□ -2.35
HADHAP40939 RNU4-84P-201ENST00000364200 139 ntBASIC0.38□□□□□ -2.35
HADHAP40939 RNU6-1327P-201ENST00000365302 105 ntBASIC0.38□□□□□ -2.35
HADHAP40939 SNORA72.6-201ENST00000384520 129 ntBASIC0.38□□□□□ -2.35
HADHAP40939 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.38□□□□□ -2.35
HADHAP40939 RNA5SP33-201ENST00000516687 98 ntBASIC0.38□□□□□ -2.35
HADHAP40939 RNU6-1271P-201ENST00000517049 105 ntBASIC0.38□□□□□ -2.35
HADHAP40939 AC022559.1-201ENST00000520905 205 ntBASIC0.38□□□□□ -2.35
HADHAP40939 MIR4305-201ENST00000583252 102 ntBASIC0.38□□□□□ -2.35
HADHAP40939 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.38□□□□□ -2.35
HADHAP40939 Y_RNA.120-201ENST00000363304 110 ntBASIC0.37□□□□□ -2.35
HADHAP40939 SNORD118-201ENST00000363593 134 ntBASIC0.37□□□□□ -2.35
HADHAP40939 Y_RNA.240-201ENST00000364469 95 ntBASIC0.37□□□□□ -2.35
HADHAP40939 SNORD18B-201ENST00000365659 72 ntBASIC0.37□□□□□ -2.35
HADHAP40939 SNORA8.2-201ENST00000384372 139 ntBASIC0.37□□□□□ -2.35
HADHAP40939 Y_RNA.497-201ENST00000384447 98 ntBASIC0.37□□□□□ -2.35
HADHAP40939 Y_RNA.567-201ENST00000384736 106 ntBASIC0.37□□□□□ -2.35
HADHAP40939 SNORA62.5-201ENST00000516634 120 ntBASIC0.37□□□□□ -2.35
HADHAP40939 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.37□□□□□ -2.35
HADHAP40939 AP002392.1-201ENST00000537692 208 ntBASIC0.37□□□□□ -2.35
HADHAP40939 AC022523.2-201ENST00000561045 150 ntBASIC0.37□□□□□ -2.35
HADHAP40939 AC133485.4-201ENST00000561835 220 ntBASIC0.37□□□□□ -2.35
HADHAP40939 DNAJC19P2-201ENST00000593340 302 ntBASIC0.37□□□□□ -2.35
HADHAP40939 MIR8087-201ENST00000612745 78 ntBASIC0.37□□□□□ -2.35
HADHAP40939 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
HADHAP40939 MIR330-201ENST00000362196 94 ntBASIC0.36□□□□□ -2.35
HADHAP40939 Y_RNA.85-201ENST00000363014 111 ntBASIC0.36□□□□□ -2.35
HADHAP40939 RNA5SP457-201ENST00000363657 124 ntBASIC0.36□□□□□ -2.35
HADHAP40939 Y_RNA.299-201ENST00000364973 94 ntBASIC0.36□□□□□ -2.35
HADHAP40939 RNU6-716P-201ENST00000365621 103 ntBASIC0.36□□□□□ -2.35
HADHAP40939 Y_RNA.531-201ENST00000384589 121 ntBASIC0.36□□□□□ -2.35
HADHAP40939 Y_RNA.536-201ENST00000384621 113 ntBASIC0.36□□□□□ -2.35
HADHAP40939 RNU6-1135P-201ENST00000411083 103 ntBASIC0.36□□□□□ -2.35
HADHAP40939 RNU4-58P-201ENST00000363192 141 ntBASIC0.35□□□□□ -2.35
HADHAP40939 Y_RNA.115-201ENST00000363272 98 ntBASIC0.35□□□□□ -2.35
HADHAP40939 RNU6-200P-201ENST00000364743 107 ntBASIC0.35□□□□□ -2.35
HADHAP40939 Y_RNA.470-201ENST00000384307 117 ntBASIC0.35□□□□□ -2.35
HADHAP40939 Y_RNA.697-201ENST00000516776 113 ntBASIC0.35□□□□□ -2.35
HADHAP40939 AC138907.4-201ENST00000570107 226 ntBASIC0.35□□□□□ -2.35
HADHAP40939 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.35□□□□□ -2.35
HADHAP40939 RNU6-379P-201ENST00000363813 104 ntBASIC0.34□□□□□ -2.36
HADHAP40939 Y_RNA.476-201ENST00000384347 108 ntBASIC0.34□□□□□ -2.36
HADHAP40939 SNORD37.2-201ENST00000391075 66 ntBASIC0.34□□□□□ -2.36
HADHAP40939 RNU7-120P-201ENST00000459334 63 ntBASIC0.34□□□□□ -2.36
HADHAP40939 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
HADHAP40939 AC098479.1-201ENST00000609225 154 ntBASIC0.34□□□□□ -2.36
HADHAP40939 AC078938.1-201ENST00000620993 318 ntBASIC0.34□□□□□ -2.36
HADHAP40939 SNORD44.1-201ENST00000363202 61 ntBASIC0.33□□□□□ -2.36
HADHAP40939 SNORD114-10-201ENST00000363409 72 ntBASIC0.33□□□□□ -2.36
HADHAP40939 SNORA36.1-201ENST00000363424 132 ntBASIC0.33□□□□□ -2.36
HADHAP40939 RNU6-1229P-201ENST00000364295 107 ntBASIC0.33□□□□□ -2.36
HADHAP40939 RNU6-535P-201ENST00000384722 107 ntBASIC0.33□□□□□ -2.36
HADHAP40939 MIR644A-201ENST00000385262 94 ntBASIC0.33□□□□□ -2.36
HADHAP40939 MIRLET7F2-201ENST00000385277 83 ntBASIC0.33□□□□□ -2.36
HADHAP40939 Y_RNA.584-201ENST00000391090 114 ntBASIC0.33□□□□□ -2.36
HADHAP40939 RNU6-588P-201ENST00000410281 105 ntBASIC0.33□□□□□ -2.36
HADHAP40939 RNA5SP330-201ENST00000517096 96 ntBASIC0.33□□□□□ -2.36
HADHAP40939 AC021443.1-201ENST00000604478 211 ntBASIC0.33□□□□□ -2.36
HADHAP40939 MIR103A1-201ENST00000362165 78 ntBASIC0.32□□□□□ -2.36
HADHAP40939 Y_RNA.32-201ENST00000362589 110 ntBASIC0.32□□□□□ -2.36
HADHAP40939 Y_RNA.441-201ENST00000384123 112 ntBASIC0.32□□□□□ -2.36
HADHAP40939 RNU6-291P-201ENST00000384720 107 ntBASIC0.32□□□□□ -2.36
HADHAP40939 Y_RNA.662-201ENST00000516028 97 ntBASIC0.32□□□□□ -2.36
HADHAP40939 SNORA31.14-201ENST00000516728 116 ntBASIC0.32□□□□□ -2.36
HADHAP40939 SNORA25.16-201ENST00000516741 121 ntBASIC0.32□□□□□ -2.36
HADHAP40939 DEFB131E-201ENST00000532329 154 ntBASIC0.32□□□□□ -2.36
HADHAP40939 MIR4639-201ENST00000584938 69 ntBASIC0.32□□□□□ -2.36
HADHAP40939 Y_RNA.29-201ENST00000362570 113 ntBASIC0.31□□□□□ -2.36
HADHAP40939 RNU6-508P-201ENST00000363231 103 ntBASIC0.31□□□□□ -2.36
HADHAP40939 RNY1P11-201ENST00000363759 113 ntBASIC0.31□□□□□ -2.36
HADHAP40939 AL603914.1-201ENST00000401964 204 ntBASIC0.31□□□□□ -2.36
HADHAP40939 RNU2-60P-201ENST00000517290 128 ntBASIC0.31□□□□□ -2.36
HADHAP40939 SNORA25.18-201ENST00000607153 114 ntBASIC0.31□□□□□ -2.36
HADHAP40939 MIR6828-201ENST00000636181 60 ntBASIC0.31□□□□□ -2.36
HADHAP40939 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms