Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 RNU6-524P-201ENST00000384270 107 ntBASIC-0.96□□□□□ -2.56
CD40LGP29965 RNU6-24P-201ENST00000384440 107 ntBASIC-0.96□□□□□ -2.56
CD40LGP29965 RNU6-429P-201ENST00000384582 108 ntBASIC-0.96□□□□□ -2.56
CD40LGP29965 MIR635-201ENST00000384830 98 ntBASIC-0.96□□□□□ -2.56
CD40LGP29965 MIR617-201ENST00000385030 97 ntBASIC-0.96□□□□□ -2.56
CD40LGP29965 RNU6-130P-201ENST00000411112 103 ntBASIC-0.96□□□□□ -2.56
CD40LGP29965 MTATP6P23-201ENST00000440153 476 ntBASIC-0.96□□□□□ -2.56
CD40LGP29965 AL353813.1-201ENST00000440700 253 ntBASIC-0.96□□□□□ -2.56
CD40LGP29965 SNRPGP8-201ENST00000454064 226 ntBASIC-0.96□□□□□ -2.56
CD40LGP29965 RNU7-106P-201ENST00000459514 67 ntBASIC-0.96□□□□□ -2.56
CD40LGP29965 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.96□□□□□ -2.56
CD40LGP29965 AC006006.1-201ENST00000603082 144 ntBASIC-0.96□□□□□ -2.56
CD40LGP29965 U4.5-201ENST00000617137 123 ntBASIC-0.96□□□□□ -2.56
CD40LGP29965 SNORD113-8-201ENST00000363497 74 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 RNU4-16P-201ENST00000364737 141 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 MIR519A1-201ENST00000385257 85 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
CD40LGP29965 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 AC016907.1-201ENST00000419483 435 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 AC244090.1-201ENST00000441884 93 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 RNU7-134P-201ENST00000458997 64 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 SNORD67.1-201ENST00000516618 108 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 SNORD116.3-201ENST00000517176 78 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 MIR4460-201ENST00000577862 86 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 MIR4306-201ENST00000583390 91 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 MIR6854-201ENST00000614935 69 ntBASIC-0.97□□□□□ -2.56
CD40LGP29965 SNORA51.5-201ENST00000384126 131 ntBASIC-0.98□□□□□ -2.57
CD40LGP29965 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.98□□□□□ -2.57
CD40LGP29965 RNU6-102P-201ENST00000384485 104 ntBASIC-0.98□□□□□ -2.57
CD40LGP29965 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.98□□□□□ -2.57
CD40LGP29965 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.98□□□□□ -2.57
CD40LGP29965 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.98□□□□□ -2.57
CD40LGP29965 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.98□□□□□ -2.57
CD40LGP29965 SERF1AP1-201ENST00000514575 187 ntBASIC-0.98□□□□□ -2.57
CD40LGP29965 RNU7-70P-201ENST00000516941 66 ntBASIC-0.98□□□□□ -2.57
CD40LGP29965 AC007012.1-201ENST00000567192 175 ntBASIC-0.98□□□□□ -2.57
CD40LGP29965 SNORD114-15-201ENST00000364687 72 ntBASIC-0.99□□□□□ -2.57
CD40LGP29965 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.99□□□□□ -2.57
CD40LGP29965 SNORD63B-201ENST00000411005 70 ntBASIC-0.99□□□□□ -2.57
CD40LGP29965 HSPE1P25-201ENST00000455484 251 ntBASIC-0.99□□□□□ -2.57
CD40LGP29965 MIR2113-201ENST00000459007 91 ntBASIC-0.99□□□□□ -2.57
CD40LGP29965 AC069439.1-201ENST00000494739 167 ntBASIC-0.99□□□□□ -2.57
CD40LGP29965 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.99□□□□□ -2.57
CD40LGP29965 MIR3115-201ENST00000577915 68 ntBASIC-0.99□□□□□ -2.57
CD40LGP29965 AC006504.6-201ENST00000590142 199 ntBASIC-0.99□□□□□ -2.57
CD40LGP29965 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.99□□□□□ -2.57
CD40LGP29965 AC133104.2-201ENST00000615272 193 ntBASIC-0.99□□□□□ -2.57
CD40LGP29965 RNU6-1260P-201ENST00000362944 107 ntBASIC-1□□□□□ -2.57
CD40LGP29965 SNORD74.6-201ENST00000364796 70 ntBASIC-1□□□□□ -2.57
CD40LGP29965 Y_RNA.365-201ENST00000365537 102 ntBASIC-1□□□□□ -2.57
CD40LGP29965 RNU6-1040P-201ENST00000383974 107 ntBASIC-1□□□□□ -2.57
CD40LGP29965 Y_RNA.463-201ENST00000384271 102 ntBASIC-1□□□□□ -2.57
CD40LGP29965 RNU6-1307P-201ENST00000391012 103 ntBASIC-1□□□□□ -2.57
CD40LGP29965 MIR1277-201ENST00000408536 78 ntBASIC-1□□□□□ -2.57
CD40LGP29965 Y_RNA.602-201ENST00000410535 92 ntBASIC-1□□□□□ -2.57
CD40LGP29965 RNU6-592P-201ENST00000411333 103 ntBASIC-1□□□□□ -2.57
CD40LGP29965 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1□□□□□ -2.57
CD40LGP29965 Y_RNA.809-201ENST00000516058 95 ntBASIC-1□□□□□ -2.57
CD40LGP29965 RNU6-718P-201ENST00000516166 105 ntBASIC-1□□□□□ -2.57
CD40LGP29965 SNORA40.14-201ENST00000516543 86 ntBASIC-1□□□□□ -2.57
CD40LGP29965 SNORA40.17-201ENST00000517256 115 ntBASIC-1□□□□□ -2.57
CD40LGP29965 AC040926.1-201ENST00000530195 238 ntBASIC-1□□□□□ -2.57
CD40LGP29965 AL008718.3-201ENST00000610217 321 ntBASIC-1□□□□□ -2.57
CD40LGP29965 RNU6-845P-201ENST00000362578 103 ntBASIC-1.01□□□□□ -2.57
CD40LGP29965 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.01□□□□□ -2.57
CD40LGP29965 RNY4P3-201ENST00000365254 95 ntBASIC-1.01□□□□□ -2.57
CD40LGP29965 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.01□□□□□ -2.57
CD40LGP29965 SNORA53-201ENST00000391141 249 ntBASIC-1.01□□□□□ -2.57
CD40LGP29965 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.01□□□□□ -2.57
CD40LGP29965 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.01□□□□□ -2.57
CD40LGP29965 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.01□□□□□ -2.57
CD40LGP29965 RNU6-559P-201ENST00000516151 98 ntBASIC-1.01□□□□□ -2.57
CD40LGP29965 RNU6-287P-201ENST00000516230 98 ntBASIC-1.01□□□□□ -2.57
CD40LGP29965 RNU6-358P-201ENST00000516564 75 ntBASIC-1.01□□□□□ -2.57
CD40LGP29965 RNY1P9-201ENST00000532431 109 ntBASIC-1.01□□□□□ -2.57
CD40LGP29965 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.01□□□□□ -2.57
CD40LGP29965 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.01□□□□□ -2.57
CD40LGP29965 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.02□□□□□ -2.57
CD40LGP29965 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.02□□□□□ -2.57
CD40LGP29965 SNORD114-10-201ENST00000363409 72 ntBASIC-1.02□□□□□ -2.57
CD40LGP29965 SNORA32-201ENST00000384072 121 ntBASIC-1.02□□□□□ -2.57
CD40LGP29965 RNU6-662P-201ENST00000384253 104 ntBASIC-1.02□□□□□ -2.57
CD40LGP29965 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.02□□□□□ -2.57
CD40LGP29965 MT-TT-201ENST00000387460 66 ntBASIC-1.02□□□□□ -2.57
CD40LGP29965 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.02□□□□□ -2.57
CD40LGP29965 MIR548E-201ENST00000408287 88 ntBASIC-1.02□□□□□ -2.57
CD40LGP29965 MIR548F1-201ENST00000408667 84 ntBASIC-1.02□□□□□ -2.57
CD40LGP29965 MIR4500-201ENST00000579472 76 ntBASIC-1.02□□□□□ -2.57
CD40LGP29965 snoU18.1-201ENST00000629629 71 ntBASIC-1.02□□□□□ -2.57
CD40LGP29965 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.03□□□□□ -2.57
CD40LGP29965 RNU6-10P-201ENST00000384036 107 ntBASIC-1.03□□□□□ -2.57
CD40LGP29965 RNY3P5-201ENST00000384127 102 ntBASIC-1.03□□□□□ -2.57
CD40LGP29965 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.03□□□□□ -2.57
CD40LGP29965 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.03□□□□□ -2.57
CD40LGP29965 MIR8485-201ENST00000401372 91 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms