Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 RNU6-809P-201ENST00000384461 107 ntBASIC-1.04□□□□□ -2.58
ACANP16112 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.04□□□□□ -2.58
ACANP16112 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
ACANP16112 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.04□□□□□ -2.58
ACANP16112 RNU6-311P-201ENST00000516224 102 ntBASIC-1.04□□□□□ -2.58
ACANP16112 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.04□□□□□ -2.58
ACANP16112 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.04□□□□□ -2.58
ACANP16112 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.04□□□□□ -2.58
ACANP16112 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.04□□□□□ -2.58
ACANP16112 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.04□□□□□ -2.58
ACANP16112 RNU6-647P-201ENST00000364243 107 ntBASIC-1.04□□□□□ -2.58
ACANP16112 RNU6-606P-201ENST00000384721 111 ntBASIC-1.04□□□□□ -2.58
ACANP16112 MIR181A1-201ENST00000385026 110 ntBASIC-1.04□□□□□ -2.58
ACANP16112 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.04□□□□□ -2.58
ACANP16112 SNORD63B-201ENST00000411005 70 ntBASIC-1.04□□□□□ -2.58
ACANP16112 MTATP6P19-201ENST00000413797 659 ntBASIC-1.04□□□□□ -2.58
ACANP16112 RNU7-116P-201ENST00000516940 62 ntBASIC-1.04□□□□□ -2.58
ACANP16112 RNU6-334P-201ENST00000517072 102 ntBASIC-1.04□□□□□ -2.58
ACANP16112 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.04□□□□□ -2.58
ACANP16112 AC018638.8-201ENST00000588755 281 ntBASIC-1.04□□□□□ -2.58
ACANP16112 AC021443.1-201ENST00000604478 211 ntBASIC-1.04□□□□□ -2.58
ACANP16112 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.05□□□□□ -2.58
ACANP16112 SNORA62.4-201ENST00000365504 151 ntBASIC-1.05□□□□□ -2.58
ACANP16112 RNU6-108P-201ENST00000365558 107 ntBASIC-1.05□□□□□ -2.58
ACANP16112 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.05□□□□□ -2.58
ACANP16112 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.05□□□□□ -2.58
ACANP16112 AC113618.1-201ENST00000416747 285 ntBASIC-1.05□□□□□ -2.58
ACANP16112 RNU7-167P-201ENST00000459160 62 ntBASIC-1.05□□□□□ -2.58
ACANP16112 RNU7-80P-201ENST00000459562 61 ntBASIC-1.05□□□□□ -2.58
ACANP16112 AP002963.1-201ENST00000530590 184 ntBASIC-1.05□□□□□ -2.58
ACANP16112 SNORD36A-201ENST00000362874 73 ntBASIC-1.05□□□□□ -2.58
ACANP16112 SNORD115-47-201ENST00000391226 86 ntBASIC-1.05□□□□□ -2.58
ACANP16112 AC104850.1-201ENST00000435940 476 ntBASIC-1.05□□□□□ -2.58
ACANP16112 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.05□□□□□ -2.58
ACANP16112 snoU109.3-201ENST00000459477 145 ntBASIC-1.05□□□□□ -2.58
ACANP16112 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.05□□□□□ -2.58
ACANP16112 MIR4424-201ENST00000585257 86 ntBASIC-1.05□□□□□ -2.58
ACANP16112 AC084782.3-201ENST00000612282 578 ntBASIC-1.05□□□□□ -2.58
ACANP16112 MIR6841-201ENST00000637129 72 ntBASIC-1.05□□□□□ -2.58
ACANP16112 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.06□□□□□ -2.58
ACANP16112 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.06□□□□□ -2.58
ACANP16112 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.06□□□□□ -2.58
ACANP16112 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.06□□□□□ -2.58
ACANP16112 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.06□□□□□ -2.58
ACANP16112 MTCO2P21-201ENST00000419780 677 ntBASIC-1.06□□□□□ -2.58
ACANP16112 Z83846.1-201ENST00000446798 265 ntBASIC-1.06□□□□□ -2.58
ACANP16112 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.06□□□□□ -2.58
ACANP16112 MTATP6P15-201ENST00000527233 835 ntBASIC-1.06□□□□□ -2.58
ACANP16112 MTATP6P24-201ENST00000576835 677 ntBASIC-1.06□□□□□ -2.58
ACANP16112 RNU6-766P-201ENST00000362478 107 ntBASIC-1.06□□□□□ -2.58
ACANP16112 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.06□□□□□ -2.58
ACANP16112 RNU4-50P-201ENST00000364361 141 ntBASIC-1.06□□□□□ -2.58
ACANP16112 RNU6-533P-201ENST00000384144 107 ntBASIC-1.06□□□□□ -2.58
ACANP16112 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.06□□□□□ -2.58
ACANP16112 SNORA53-201ENST00000391141 249 ntBASIC-1.06□□□□□ -2.58
ACANP16112 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.06□□□□□ -2.58
ACANP16112 AC107399.1-201ENST00000451226 265 ntBASIC-1.06□□□□□ -2.58
ACANP16112 SNORA19.3-201ENST00000516165 130 ntBASIC-1.06□□□□□ -2.58
ACANP16112 AC024909.2-201ENST00000553035 286 ntBASIC-1.06□□□□□ -2.58
ACANP16112 MIR3672-201ENST00000584290 82 ntBASIC-1.06□□□□□ -2.58
ACANP16112 FGF7P2-201ENST00000332473 296 ntBASIC-1.07□□□□□ -2.58
ACANP16112 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.07□□□□□ -2.58
ACANP16112 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.07□□□□□ -2.58
ACANP16112 RNU6-893P-201ENST00000458841 100 ntBASIC-1.07□□□□□ -2.58
ACANP16112 AC016550.1-201ENST00000505348 785 ntBASIC-1.07□□□□□ -2.58
ACANP16112 RNU6-470P-201ENST00000515954 104 ntBASIC-1.07□□□□□ -2.58
ACANP16112 MIR5197-201ENST00000583721 112 ntBASIC-1.07□□□□□ -2.58
ACANP16112 AL158211.2-201ENST00000607282 395 ntBASIC-1.07□□□□□ -2.58
ACANP16112 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.07□□□□□ -2.58
ACANP16112 RNU6-170P-201ENST00000362832 104 ntBASIC-1.07□□□□□ -2.58
ACANP16112 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.07□□□□□ -2.58
ACANP16112 RNU6-82P-201ENST00000363970 107 ntBASIC-1.07□□□□□ -2.58
ACANP16112 SNORA63.6-201ENST00000364921 119 ntBASIC-1.07□□□□□ -2.58
ACANP16112 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.07□□□□□ -2.58
ACANP16112 SNORA72.4-201ENST00000384174 132 ntBASIC-1.07□□□□□ -2.58
ACANP16112 RNU6-102P-201ENST00000384485 104 ntBASIC-1.07□□□□□ -2.58
ACANP16112 AL009048.1-201ENST00000450437 298 ntBASIC-1.07□□□□□ -2.58
ACANP16112 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.07□□□□□ -2.58
ACANP16112 RNU7-180P-201ENST00000459240 63 ntBASIC-1.07□□□□□ -2.58
ACANP16112 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.07□□□□□ -2.58
ACANP16112 Vault.3-201ENST00000516676 95 ntBASIC-1.07□□□□□ -2.58
ACANP16112 RNU6-762P-201ENST00000517107 102 ntBASIC-1.07□□□□□ -2.58
ACANP16112 AC019193.3-201ENST00000609144 554 ntBASIC-1.07□□□□□ -2.58
ACANP16112 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.07□□□□□ -2.58
ACANP16112 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.07□□□□□ -2.58
ACANP16112 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.07□□□□□ -2.58
ACANP16112 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.07□□□□□ -2.58
ACANP16112 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.08□□□□□ -2.58
ACANP16112 RNU6-883P-201ENST00000384597 107 ntBASIC-1.08□□□□□ -2.58
ACANP16112 RNU6-243P-201ENST00000391140 107 ntBASIC-1.08□□□□□ -2.58
ACANP16112 MIR1255B2-201ENST00000408618 67 ntBASIC-1.08□□□□□ -2.58
ACANP16112 SNORD12B-201ENST00000410433 91 ntBASIC-1.08□□□□□ -2.58
ACANP16112 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.08□□□□□ -2.58
ACANP16112 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.08□□□□□ -2.58
ACANP16112 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.08□□□□□ -2.58
ACANP16112 MTND2P22-201ENST00000444325 1033 ntBASIC-1.08□□□□□ -2.58
ACANP16112 RNU6-719P-201ENST00000516671 104 ntBASIC-1.08□□□□□ -2.58
ACANP16112 MIR4703-201ENST00000577728 79 ntBASIC-1.08□□□□□ -2.58
ACANP16112 AC005520.4-201ENST00000604337 90 ntBASIC-1.08□□□□□ -2.58
ACANP16112 AC005014.3-201ENST00000605985 190 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms