Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNU6-807P-201ENST00000516805 107 ntBASIC-3.55□□□□□ -2.98
VCANP13611 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-3.56□□□□□ -2.98
VCANP13611 RNU7-106P-201ENST00000459514 67 ntBASIC-3.56□□□□□ -2.98
VCANP13611 SNORA43.4-201ENST00000629559 138 ntBASIC-3.56□□□□□ -2.98
VCANP13611 RNU6-809P-201ENST00000384461 107 ntBASIC-3.57□□□□□ -2.98
VCANP13611 SNORA53-201ENST00000391141 249 ntBASIC-3.57□□□□□ -2.98
VCANP13611 MIR6739-201ENST00000622461 75 ntBASIC-3.57□□□□□ -2.98
VCANP13611 MIR302B-201ENST00000362188 73 ntBASIC-3.57□□□□□ -2.98
VCANP13611 RNU6-598P-201ENST00000364017 105 ntBASIC-3.57□□□□□ -2.98
VCANP13611 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-3.57□□□□□ -2.98
VCANP13611 snoU13.17-201ENST00000458802 104 ntBASIC-3.57□□□□□ -2.98
VCANP13611 RNU6-974P-201ENST00000384099 108 ntBASIC-3.58□□□□□ -2.98
VCANP13611 RNU6-1086P-201ENST00000410930 100 ntBASIC-3.58□□□□□ -2.98
VCANP13611 AC068137.4-201ENST00000638485 296 ntBASIC-3.58□□□□□ -2.98
VCANP13611 AL391262.2-201ENST00000622466 494 ntBASIC-3.58□□□□□ -2.98
VCANP13611 MIR342-201ENST00000362212 99 ntBASIC-3.59□□□□□ -2.98
VCANP13611 AC137499.1-201ENST00000427602 88 ntBASIC-3.59□□□□□ -2.98
VCANP13611 SNORD63.2-201ENST00000516303 64 ntBASIC-3.59□□□□□ -2.98
VCANP13611 MIR5692C2-201ENST00000577959 77 ntBASIC-3.59□□□□□ -2.98
VCANP13611 RNU7-45P-201ENST00000459460 63 ntBASIC-3.59□□□□□ -2.98
VCANP13611 AC072039.2-201ENST00000608883 439 ntBASIC-3.59□□□□□ -2.98
VCANP13611 AC092574.1-201ENST00000609771 420 ntBASIC-3.59□□□□□ -2.98
VCANP13611 RNU6-235P-201ENST00000362644 107 ntBASIC-3.59□□□□□ -2.98
VCANP13611 RNU6-660P-201ENST00000364566 109 ntBASIC-3.59□□□□□ -2.98
VCANP13611 RNU6-935P-201ENST00000410371 100 ntBASIC-3.59□□□□□ -2.98
VCANP13611 AC024067.1-201ENST00000426199 223 ntBASIC-3.59□□□□□ -2.98
VCANP13611 AC119751.4-201ENST00000507498 357 ntBASIC-3.59□□□□□ -2.98
VCANP13611 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-3.59□□□□□ -2.98
VCANP13611 AP002782.1-201ENST00000623107 614 ntBASIC-3.59□□□□□ -2.98
VCANP13611 MTCO2P3-201ENST00000442543 421 ntBASIC-3.6□□□□□ -2.99
VCANP13611 RNU7-70P-201ENST00000516941 66 ntBASIC-3.6□□□□□ -2.99
VCANP13611 JPX_2.1-201ENST00000614161 69 ntBASIC-3.6□□□□□ -2.99
VCANP13611 MIR429-201ENST00000362106 83 ntBASIC-3.6□□□□□ -2.99
VCANP13611 SNORA72-201ENST00000384339 132 ntBASIC-3.6□□□□□ -2.99
VCANP13611 U3.27-201ENST00000391237 200 ntBASIC-3.6□□□□□ -2.99
VCANP13611 snoU13.6-201ENST00000458785 104 ntBASIC-3.6□□□□□ -2.99
VCANP13611 SNORA25.10-201ENST00000515926 124 ntBASIC-3.6□□□□□ -2.99
VCANP13611 SNORD114-10-201ENST00000363409 72 ntBASIC-3.61□□□□□ -2.99
VCANP13611 RPS29P25-201ENST00000481709 171 ntBASIC-3.61□□□□□ -2.99
VCANP13611 RNU6-371P-201ENST00000364283 108 ntBASIC-3.61□□□□□ -2.99
VCANP13611 Y_RNA.441-201ENST00000384123 112 ntBASIC-3.61□□□□□ -2.99
VCANP13611 SNORD90-201ENST00000391145 111 ntBASIC-3.61□□□□□ -2.99
VCANP13611 MTND3P1-201ENST00000441336 220 ntBASIC-3.61□□□□□ -2.99
VCANP13611 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-3.61□□□□□ -2.99
VCANP13611 RNU6-318P-201ENST00000384283 103 ntBASIC-3.62□□□□□ -2.99
VCANP13611 RNU6-176P-201ENST00000517196 105 ntBASIC-3.62□□□□□ -2.99
VCANP13611 RNU6-590P-201ENST00000365039 107 ntBASIC-3.62□□□□□ -2.99
VCANP13611 RNU6-1321P-201ENST00000390905 107 ntBASIC-3.62□□□□□ -2.99
VCANP13611 AC091946.2-201ENST00000606105 291 ntBASIC-3.62□□□□□ -2.99
VCANP13611 TRDV1-202ENST00000621643 102 ntBASIC-3.62□□□□□ -2.99
VCANP13611 RNA5SP144-201ENST00000410846 116 ntBASIC-3.62□□□□□ -2.99
VCANP13611 MTND1P5-201ENST00000517906 940 ntBASIC-3.62□□□□□ -2.99
VCANP13611 MIR4696-201ENST00000581431 70 ntBASIC-3.63□□□□□ -2.99
VCANP13611 MIR548A1-201ENST00000385041 97 ntBASIC-3.63□□□□□ -2.99
VCANP13611 RNU6-243P-201ENST00000391140 107 ntBASIC-3.63□□□□□ -2.99
VCANP13611 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-3.64□□□□□ -2.99
VCANP13611 AC062037.1-201ENST00000605302 128 ntBASIC-3.64□□□□□ -2.99
VCANP13611 Y_RNA.144-201ENST00000363521 113 ntBASIC-3.64□□□□□ -2.99
VCANP13611 Y_RNA.184-201ENST00000363884 108 ntBASIC-3.65□□□□□ -2.99
VCANP13611 MIR578-201ENST00000384828 96 ntBASIC-3.65□□□□□ -2.99
VCANP13611 MIR516A2-201ENST00000384888 90 ntBASIC-3.65□□□□□ -2.99
VCANP13611 MIR516A1-201ENST00000385033 90 ntBASIC-3.65□□□□□ -2.99
VCANP13611 SNORA63-201ENST00000363450 132 ntBASIC-3.65□□□□□ -2.99
VCANP13611 MIR451A-201ENST00000385059 72 ntBASIC-3.65□□□□□ -2.99
VCANP13611 RNU6-788P-201ENST00000390967 104 ntBASIC-3.65□□□□□ -2.99
VCANP13611 RNU6-677P-201ENST00000516914 101 ntBASIC-3.65□□□□□ -2.99
VCANP13611 RNU6-254P-201ENST00000363377 107 ntBASIC-3.65□□□□□ -2.99
VCANP13611 MIR4637-201ENST00000582405 84 ntBASIC-3.65□□□□□ -2.99
VCANP13611 AC006566.1-201ENST00000608943 513 ntBASIC-3.66□□□□□ -2.99
VCANP13611 RNU7-35P-201ENST00000517174 62 ntBASIC-3.66□□□□□ -3
VCANP13611 AC133794.1-201ENST00000602731 914 ntBASIC-3.66□□□□□ -3
VCANP13611 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.67□□□□□ -3
VCANP13611 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.67□□□□□ -3
VCANP13611 RNU6-456P-201ENST00000384493 107 ntBASIC-3.67□□□□□ -3
VCANP13611 RNU6-938P-201ENST00000411285 103 ntBASIC-3.67□□□□□ -3
VCANP13611 ADI1P3-201ENST00000549509 470 ntBASIC-3.67□□□□□ -3
VCANP13611 MIR548A3-201ENST00000385297 97 ntBASIC-3.68□□□□□ -3
VCANP13611 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-3.68□□□□□ -3
VCANP13611 RPL39P6-201ENST00000448289 150 ntBASIC-3.68□□□□□ -3
VCANP13611 RNU6-543P-201ENST00000362576 108 ntBASIC-3.68□□□□□ -3
VCANP13611 SNORD70.1-201ENST00000391007 85 ntBASIC-3.68□□□□□ -3
VCANP13611 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-3.68□□□□□ -3
VCANP13611 RNU6-1270P-201ENST00000517128 108 ntBASIC-3.69□□□□□ -3
VCANP13611 RNU6-1120P-201ENST00000362988 108 ntBASIC-3.69□□□□□ -3
VCANP13611 RNU6-960P-201ENST00000364056 120 ntBASIC-3.69□□□□□ -3
VCANP13611 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-3.69□□□□□ -3
VCANP13611 AC011476.5-201ENST00000615594 130 ntBASIC-3.69□□□□□ -3
VCANP13611 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.69□□□□□ -3
VCANP13611 Y_RNA.166-201ENST00000363730 102 ntBASIC-3.69□□□□□ -3
VCANP13611 RNU6-551P-201ENST00000516661 103 ntBASIC-3.69□□□□□ -3
VCANP13611 RNU6-97P-201ENST00000363387 104 ntBASIC-3.7□□□□□ -3
VCANP13611 RNU6-1039P-201ENST00000383931 107 ntBASIC-3.7□□□□□ -3
VCANP13611 SNORD72-201ENST00000390994 80 ntBASIC-3.7□□□□□ -3
VCANP13611 RNU2-66P-201ENST00000410650 161 ntBASIC-3.7□□□□□ -3
VCANP13611 SNORD36A-201ENST00000362874 73 ntBASIC-3.7□□□□□ -3
VCANP13611 RNU6-1337P-201ENST00000516525 95 ntBASIC-3.7□□□□□ -3
VCANP13611 AC008507.4-201ENST00000585464 127 ntBASIC-3.7□□□□□ -3
VCANP13611 AC124864.2-201ENST00000624736 186 ntBASIC-3.7□□□□□ -3
VCANP13611 Y_RNA.101-201ENST00000363154 102 ntBASIC-3.71□□□□□ -3
VCANP13611 RNU6-167P-201ENST00000384292 106 ntBASIC-3.71□□□□□ -3
Retrieved 100 of 98,524 protein–RNA pairs in 228.7 ms