Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AL513043.2-201ENST00000573941 143 ntBASIC2.29□□□□□ -2.04
HOXD8P13378 AP000753.3-201ENST00000604083 169 ntBASIC2.29□□□□□ -2.04
HOXD8P13378 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
HOXD8P13378 MIR194-1-201ENST00000384892 85 ntBASIC2.28□□□□□ -2.04
HOXD8P13378 RPS27P21-201ENST00000486977 252 ntBASIC2.28□□□□□ -2.04
HOXD8P13378 AC093729.1-201ENST00000513074 128 ntBASIC2.28□□□□□ -2.04
HOXD8P13378 AC121758.2-201ENST00000553271 193 ntBASIC2.28□□□□□ -2.04
HOXD8P13378 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HOXD8P13378 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
HOXD8P13378 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
HOXD8P13378 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HOXD8P13378 Y_RNA.94-201ENST00000363068 106 ntBASIC2.27□□□□□ -2.05
HOXD8P13378 MIR588-201ENST00000384900 83 ntBASIC2.27□□□□□ -2.05
HOXD8P13378 SNORD23.1-201ENST00000408212 104 ntBASIC2.27□□□□□ -2.05
HOXD8P13378 AC055731.1-201ENST00000474387 401 ntBASIC2.27□□□□□ -2.05
HOXD8P13378 RNA5SP182-201ENST00000516064 82 ntBASIC2.27□□□□□ -2.05
HOXD8P13378 AC090897.1-201ENST00000580909 226 ntBASIC2.27□□□□□ -2.05
HOXD8P13378 AC145423.2-201ENST00000610631 239 ntBASIC2.27□□□□□ -2.05
HOXD8P13378 MIR6845-201ENST00000613182 61 ntBASIC2.27□□□□□ -2.05
HOXD8P13378 WWP1P1-201ENST00000466609 2769 ntBASIC2.26□□□□□ -2.05
HOXD8P13378 RNU6-315P-201ENST00000362666 107 ntBASIC2.26□□□□□ -2.05
HOXD8P13378 SNORA25.3-201ENST00000363205 127 ntBASIC2.26□□□□□ -2.05
HOXD8P13378 Y_RNA.173-201ENST00000363776 113 ntBASIC2.26□□□□□ -2.05
HOXD8P13378 RNU6-396P-201ENST00000365369 105 ntBASIC2.26□□□□□ -2.05
HOXD8P13378 MIR519C-201ENST00000385053 87 ntBASIC2.26□□□□□ -2.05
HOXD8P13378 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.26□□□□□ -2.05
HOXD8P13378 RNU6-519P-201ENST00000410590 108 ntBASIC2.26□□□□□ -2.05
HOXD8P13378 MIR4500-201ENST00000579472 76 ntBASIC2.26□□□□□ -2.05
HOXD8P13378 MIR4712-201ENST00000583750 82 ntBASIC2.26□□□□□ -2.05
HOXD8P13378 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HOXD8P13378 AL161722.3-201ENST00000605789 2983 ntBASIC2.25□□□□□ -2.05
HOXD8P13378 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
HOXD8P13378 RNU6-949P-201ENST00000384040 107 ntBASIC2.25□□□□□ -2.05
HOXD8P13378 Y_RNA.545-201ENST00000384652 105 ntBASIC2.25□□□□□ -2.05
HOXD8P13378 SNORD41-201ENST00000386967 70 ntBASIC2.25□□□□□ -2.05
HOXD8P13378 RNA5SP212-201ENST00000391223 107 ntBASIC2.25□□□□□ -2.05
HOXD8P13378 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.25□□□□□ -2.05
HOXD8P13378 AC108667.1-201ENST00000428618 249 ntBASIC2.25□□□□□ -2.05
HOXD8P13378 snoU13.2-201ENST00000459201 104 ntBASIC2.25□□□□□ -2.05
HOXD8P13378 MIR4287-201ENST00000579398 78 ntBASIC2.25□□□□□ -2.05
HOXD8P13378 Y_RNA.783-201ENST00000613546 102 ntBASIC2.25□□□□□ -2.05
HOXD8P13378 U6.109-201ENST00000636749 87 ntBASIC2.25□□□□□ -2.05
HOXD8P13378 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.25□□□□□ -2.05
HOXD8P13378 RNY1P2-201ENST00000364820 117 ntBASIC2.24□□□□□ -2.05
HOXD8P13378 SNORA2B-201ENST00000384583 137 ntBASIC2.24□□□□□ -2.05
HOXD8P13378 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HOXD8P13378 HSPE1P24-201ENST00000450782 238 ntBASIC2.24□□□□□ -2.05
HOXD8P13378 AC104435.1-201ENST00000483483 166 ntBASIC2.24□□□□□ -2.05
HOXD8P13378 snoU13.31-201ENST00000607291 104 ntBASIC2.24□□□□□ -2.05
HOXD8P13378 MIR8070-201ENST00000616510 88 ntBASIC2.24□□□□□ -2.05
HOXD8P13378 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.24□□□□□ -2.05
HOXD8P13378 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HOXD8P13378 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HOXD8P13378 Y_RNA.57-201ENST00000362806 113 ntBASIC2.23□□□□□ -2.05
HOXD8P13378 RNU6-590P-201ENST00000365039 107 ntBASIC2.23□□□□□ -2.05
HOXD8P13378 MIR144-201ENST00000384886 86 ntBASIC2.23□□□□□ -2.05
HOXD8P13378 MIR499A-201ENST00000384903 122 ntBASIC2.23□□□□□ -2.05
HOXD8P13378 RNU6-205P-201ENST00000390858 107 ntBASIC2.23□□□□□ -2.05
HOXD8P13378 SNORA4-201ENST00000584302 138 ntBASIC2.23□□□□□ -2.05
HOXD8P13378 MIR3192-201ENST00000584920 77 ntBASIC2.23□□□□□ -2.05
HOXD8P13378 PRELID3BP2-201ENST00000605362 201 ntBASIC2.23□□□□□ -2.05
HOXD8P13378 AL096861.1-201ENST00000610899 123 ntBASIC2.23□□□□□ -2.05
HOXD8P13378 MIR6840-201ENST00000611937 71 ntBASIC2.23□□□□□ -2.05
HOXD8P13378 U7.4-201ENST00000614961 63 ntBASIC2.23□□□□□ -2.05
HOXD8P13378 MIR8066-201ENST00000617280 78 ntBASIC2.23□□□□□ -2.05
HOXD8P13378 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HOXD8P13378 SNORA17.3-201ENST00000391159 129 ntBASIC2.22□□□□□ -2.05
HOXD8P13378 RNU6-321P-201ENST00000410912 106 ntBASIC2.22□□□□□ -2.05
HOXD8P13378 AC244023.1-201ENST00000426884 112 ntBASIC2.22□□□□□ -2.05
HOXD8P13378 MIR5089-201ENST00000580047 84 ntBASIC2.22□□□□□ -2.05
HOXD8P13378 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.22□□□□□ -2.05
HOXD8P13378 AC242498.1-201ENST00000604134 111 ntBASIC2.22□□□□□ -2.05
HOXD8P13378 MIR8063-201ENST00000621930 81 ntBASIC2.22□□□□□ -2.05
HOXD8P13378 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
HOXD8P13378 HSBP1P2-201ENST00000299671 229 ntBASIC2.21□□□□□ -2.06
HOXD8P13378 SNORD115-27-201ENST00000364430 82 ntBASIC2.21□□□□□ -2.06
HOXD8P13378 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HOXD8P13378 RNU6-380P-201ENST00000410207 107 ntBASIC2.21□□□□□ -2.06
HOXD8P13378 AL161935.2-201ENST00000414627 60 ntBASIC2.21□□□□□ -2.06
HOXD8P13378 RNU7-62P-201ENST00000458856 62 ntBASIC2.21□□□□□ -2.06
HOXD8P13378 MIR2115-201ENST00000516657 100 ntBASIC2.21□□□□□ -2.06
HOXD8P13378 MIR4264-201ENST00000583520 66 ntBASIC2.21□□□□□ -2.06
HOXD8P13378 RNA5SP133-201ENST00000363368 119 ntBASIC2.2□□□□□ -2.06
HOXD8P13378 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HOXD8P13378 AC140658.3-201ENST00000567603 271 ntBASIC2.2□□□□□ -2.06
HOXD8P13378 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXD8P13378 AC020891.4-201ENST00000605745 93 ntBASIC2.2□□□□□ -2.06
HOXD8P13378 GHRLOS.1-201ENST00000610995 70 ntBASIC2.2□□□□□ -2.06
HOXD8P13378 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXD8P13378 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXD8P13378 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXD8P13378 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HOXD8P13378 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
HOXD8P13378 RNU6-1094P-201ENST00000362416 104 ntBASIC2.19□□□□□ -2.06
HOXD8P13378 RNU6-524P-201ENST00000384270 107 ntBASIC2.19□□□□□ -2.06
HOXD8P13378 MIR583-201ENST00000384846 75 ntBASIC2.19□□□□□ -2.06
HOXD8P13378 MIR1236-201ENST00000408340 102 ntBASIC2.19□□□□□ -2.06
HOXD8P13378 RNU6-1165P-201ENST00000410119 107 ntBASIC2.19□□□□□ -2.06
HOXD8P13378 RNU6-613P-201ENST00000410412 108 ntBASIC2.19□□□□□ -2.06
HOXD8P13378 AC138749.4-201ENST00000563970 127 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms