Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
DEFA4P12838 MIR548F1-201ENST00000408667 84 ntBASIC-0.76□□□□□ -2.53
DEFA4P12838 SNORA27.4-201ENST00000516650 95 ntBASIC-0.76□□□□□ -2.53
DEFA4P12838 SCARNA15-202ENST00000516881 127 ntBASIC-0.76□□□□□ -2.53
DEFA4P12838 MIR378F-201ENST00000578143 78 ntBASIC-0.76□□□□□ -2.53
DEFA4P12838 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.77□□□□□ -2.53
DEFA4P12838 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.77□□□□□ -2.53
DEFA4P12838 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.77□□□□□ -2.53
DEFA4P12838 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.77□□□□□ -2.53
DEFA4P12838 SNORA63.7-201ENST00000365579 123 ntBASIC-0.77□□□□□ -2.53
DEFA4P12838 MIR599-201ENST00000385069 95 ntBASIC-0.77□□□□□ -2.53
DEFA4P12838 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.77□□□□□ -2.53
DEFA4P12838 RNU6-507P-201ENST00000516045 100 ntBASIC-0.77□□□□□ -2.53
DEFA4P12838 RNU6-718P-201ENST00000516166 105 ntBASIC-0.77□□□□□ -2.53
DEFA4P12838 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.77□□□□□ -2.53
DEFA4P12838 MIR3129-201ENST00000581095 76 ntBASIC-0.77□□□□□ -2.53
DEFA4P12838 MIR376A1-201ENST00000616574 68 ntBASIC-0.77□□□□□ -2.53
DEFA4P12838 AC069503.3-201ENST00000618674 145 ntBASIC-0.77□□□□□ -2.53
DEFA4P12838 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.78□□□□□ -2.53
DEFA4P12838 RNA5SP331-201ENST00000364986 107 ntBASIC-0.78□□□□□ -2.53
DEFA4P12838 RNU6-290P-201ENST00000365212 101 ntBASIC-0.78□□□□□ -2.53
DEFA4P12838 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.78□□□□□ -2.53
DEFA4P12838 MIR548I2-201ENST00000408348 149 ntBASIC-0.78□□□□□ -2.53
DEFA4P12838 AC093423.1-201ENST00000440817 142 ntBASIC-0.78□□□□□ -2.53
DEFA4P12838 AL500527.2-201ENST00000454105 95 ntBASIC-0.78□□□□□ -2.53
DEFA4P12838 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.78□□□□□ -2.53
DEFA4P12838 snoU18.1-201ENST00000629629 71 ntBASIC-0.78□□□□□ -2.53
DEFA4P12838 AC112487.2-201ENST00000637950 304 ntBASIC-0.78□□□□□ -2.53
DEFA4P12838 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 MIR181B2-201ENST00000385004 89 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 MIR616-201ENST00000385293 97 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
DEFA4P12838 SNORA53-201ENST00000391141 249 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 MIR1302-11-201ENST00000408051 138 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 MIR1302-9-201ENST00000408365 138 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 MIR1302-10-201ENST00000408734 138 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 RNU4-43P-201ENST00000410628 137 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 RNA5SP144-201ENST00000410846 116 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 SNX3P1X-201ENST00000414887 175 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 TRAJ51-201ENST00000504127 63 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 RNU7-70P-201ENST00000516941 66 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 MTND5P40-201ENST00000559945 246 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 MIR1302-2-201ENST00000607096 138 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 AC084782.3-201ENST00000612282 578 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 AC104985.2-201ENST00000620598 500 ntBASIC-0.79□□□□□ -2.54
DEFA4P12838 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.8□□□□□ -2.54
DEFA4P12838 RNU4-10P-201ENST00000364383 140 ntBASIC-0.8□□□□□ -2.54
DEFA4P12838 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.8□□□□□ -2.54
DEFA4P12838 RNU4-16P-201ENST00000364737 141 ntBASIC-0.8□□□□□ -2.54
DEFA4P12838 RNU6-47P-201ENST00000383866 107 ntBASIC-0.8□□□□□ -2.54
DEFA4P12838 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.8□□□□□ -2.54
DEFA4P12838 RNU6-976P-201ENST00000516086 111 ntBASIC-0.8□□□□□ -2.54
DEFA4P12838 RNU7-188P-201ENST00000517063 64 ntBASIC-0.8□□□□□ -2.54
DEFA4P12838 MIR4499-201ENST00000584834 69 ntBASIC-0.8□□□□□ -2.54
DEFA4P12838 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.8□□□□□ -2.54
DEFA4P12838 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.81□□□□□ -2.54
DEFA4P12838 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.81□□□□□ -2.54
DEFA4P12838 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.81□□□□□ -2.54
DEFA4P12838 SNORD114-29-201ENST00000364819 70 ntBASIC-0.81□□□□□ -2.54
DEFA4P12838 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.81□□□□□ -2.54
DEFA4P12838 RNA5SP169-201ENST00000517268 117 ntBASIC-0.81□□□□□ -2.54
DEFA4P12838 MIR3165-201ENST00000579874 75 ntBASIC-0.81□□□□□ -2.54
DEFA4P12838 AL627230.5-201ENST00000619807 58 ntBASIC-0.81□□□□□ -2.54
DEFA4P12838 uc_338.10-201ENST00000621872 182 ntBASIC-0.81□□□□□ -2.54
DEFA4P12838 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.82□□□□□ -2.54
DEFA4P12838 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.82□□□□□ -2.54
DEFA4P12838 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.82□□□□□ -2.54
DEFA4P12838 RNU6-662P-201ENST00000384253 104 ntBASIC-0.82□□□□□ -2.54
DEFA4P12838 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
DEFA4P12838 RNU6-277P-201ENST00000516272 106 ntBASIC-0.82□□□□□ -2.54
DEFA4P12838 RNU7-13P-201ENST00000516413 62 ntBASIC-0.82□□□□□ -2.54
DEFA4P12838 SNORD67.1-201ENST00000516618 108 ntBASIC-0.82□□□□□ -2.54
DEFA4P12838 RNU6-175P-201ENST00000516896 107 ntBASIC-0.82□□□□□ -2.54
DEFA4P12838 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
DEFA4P12838 AL359881.1-201ENST00000602916 267 ntBASIC-0.82□□□□□ -2.54
DEFA4P12838 MTND4LP32-201ENST00000636111 270 ntBASIC-0.82□□□□□ -2.54
DEFA4P12838 AC093726.3-201ENST00000637588 150 ntBASIC-0.82□□□□□ -2.54
DEFA4P12838 SNORA25.1-201ENST00000362326 128 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 RNU6-211P-201ENST00000384047 107 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 MIR624-201ENST00000385217 97 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 MIR601-201ENST00000385256 79 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 AL606845.1-201ENST00000404881 255 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 MIR1468-201ENST00000410600 86 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 RNU7-113P-201ENST00000459273 62 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 RNU6-274P-201ENST00000459566 107 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 AC037487.3-201ENST00000606668 112 ntBASIC-0.83□□□□□ -2.54
DEFA4P12838 MIR539-201ENST00000365690 78 ntBASIC-0.84□□□□□ -2.54
DEFA4P12838 RNY1P6-201ENST00000384193 109 ntBASIC-0.84□□□□□ -2.54
DEFA4P12838 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.84□□□□□ -2.54
DEFA4P12838 SNORD116-4-201ENST00000384733 96 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 227.1 ms