Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 RNU4-83P-201ENST00000410863 133 ntBASIC2.24□□□□□ -2.05
BMP3P12645 AC244023.1-201ENST00000426884 112 ntBASIC2.24□□□□□ -2.05
BMP3P12645 AC027119.1-201ENST00000440877 241 ntBASIC2.24□□□□□ -2.05
BMP3P12645 AC009474.2-201ENST00000451383 136 ntBASIC2.24□□□□□ -2.05
BMP3P12645 AC090897.1-201ENST00000580909 226 ntBASIC2.24□□□□□ -2.05
BMP3P12645 AC242498.1-201ENST00000604134 111 ntBASIC2.24□□□□□ -2.05
BMP3P12645 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
BMP3P12645 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
BMP3P12645 RNU6-624P-201ENST00000363411 107 ntBASIC2.23□□□□□ -2.05
BMP3P12645 RNA5SP247-201ENST00000411181 105 ntBASIC2.23□□□□□ -2.05
BMP3P12645 SNRPGP12-201ENST00000449481 213 ntBASIC2.23□□□□□ -2.05
BMP3P12645 U7.4-201ENST00000614961 63 ntBASIC2.23□□□□□ -2.05
BMP3P12645 WWP1P1-201ENST00000466609 2769 ntBASIC2.23□□□□□ -2.05
BMP3P12645 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
BMP3P12645 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
BMP3P12645 RNU4-32P-201ENST00000363404 141 ntBASIC2.22□□□□□ -2.05
BMP3P12645 RNA5SP450-201ENST00000411206 102 ntBASIC2.22□□□□□ -2.05
BMP3P12645 RNU1-40P-201ENST00000516816 164 ntBASIC2.22□□□□□ -2.05
BMP3P12645 RNU1-97P-201ENST00000516872 164 ntBASIC2.22□□□□□ -2.05
BMP3P12645 AC138749.4-201ENST00000563970 127 ntBASIC2.22□□□□□ -2.05
BMP3P12645 AP000753.3-201ENST00000604083 169 ntBASIC2.22□□□□□ -2.05
BMP3P12645 PRELID3BP2-201ENST00000605362 201 ntBASIC2.22□□□□□ -2.05
BMP3P12645 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.22□□□□□ -2.05
BMP3P12645 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.22□□□□□ -2.05
BMP3P12645 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
BMP3P12645 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
BMP3P12645 Y_RNA.57-201ENST00000362806 113 ntBASIC2.21□□□□□ -2.06
BMP3P12645 AC004965.1-201ENST00000413033 213 ntBASIC2.21□□□□□ -2.06
BMP3P12645 AL450471.1-201ENST00000447509 127 ntBASIC2.21□□□□□ -2.06
BMP3P12645 RNU7-85P-201ENST00000458851 63 ntBASIC2.21□□□□□ -2.06
BMP3P12645 snoU13.2-201ENST00000459201 104 ntBASIC2.21□□□□□ -2.06
BMP3P12645 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.21□□□□□ -2.06
BMP3P12645 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
BMP3P12645 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
BMP3P12645 Y_RNA.338-201ENST00000365320 114 ntBASIC2.2□□□□□ -2.06
BMP3P12645 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.2□□□□□ -2.06
BMP3P12645 RNA5SP270-201ENST00000411361 118 ntBASIC2.2□□□□□ -2.06
BMP3P12645 AC003989.2-201ENST00000440224 169 ntBASIC2.2□□□□□ -2.06
BMP3P12645 RNU6-717P-201ENST00000459076 104 ntBASIC2.2□□□□□ -2.06
BMP3P12645 RPS27P21-201ENST00000486977 252 ntBASIC2.2□□□□□ -2.06
BMP3P12645 RNU6-850P-201ENST00000516934 103 ntBASIC2.2□□□□□ -2.06
BMP3P12645 MIR4500-201ENST00000579472 76 ntBASIC2.2□□□□□ -2.06
BMP3P12645 AL512598.1-201ENST00000610158 273 ntBASIC2.2□□□□□ -2.06
BMP3P12645 AP000553.5-201ENST00000641933 54 ntBASIC2.2□□□□□ -2.06
BMP3P12645 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
BMP3P12645 Y_RNA.545-201ENST00000384652 105 ntBASIC2.19□□□□□ -2.06
BMP3P12645 MIR563-201ENST00000385080 79 ntBASIC2.19□□□□□ -2.06
BMP3P12645 MIR524-201ENST00000385242 87 ntBASIC2.19□□□□□ -2.06
BMP3P12645 RNU6-322P-201ENST00000516010 103 ntBASIC2.19□□□□□ -2.06
BMP3P12645 AP000942.3-201ENST00000603702 160 ntBASIC2.19□□□□□ -2.06
BMP3P12645 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.19□□□□□ -2.06
BMP3P12645 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
BMP3P12645 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
BMP3P12645 MIR588-201ENST00000384900 83 ntBASIC2.18□□□□□ -2.06
BMP3P12645 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
BMP3P12645 MIR1302-7-201ENST00000408841 72 ntBASIC2.18□□□□□ -2.06
BMP3P12645 RNA5SP338-201ENST00000410495 85 ntBASIC2.18□□□□□ -2.06
BMP3P12645 Y_RNA.648-201ENST00000459455 110 ntBASIC2.18□□□□□ -2.06
BMP3P12645 AC004223.1-201ENST00000479840 271 ntBASIC2.18□□□□□ -2.06
BMP3P12645 RNU6-523P-201ENST00000516304 54 ntBASIC2.18□□□□□ -2.06
BMP3P12645 RNA5SP82-201ENST00000516707 92 ntBASIC2.18□□□□□ -2.06
BMP3P12645 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.18□□□□□ -2.06
BMP3P12645 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
BMP3P12645 RNU6-1094P-201ENST00000362416 104 ntBASIC2.17□□□□□ -2.06
BMP3P12645 AL161935.2-201ENST00000414627 60 ntBASIC2.17□□□□□ -2.06
BMP3P12645 SNORA31.25-201ENST00000517242 134 ntBASIC2.17□□□□□ -2.06
BMP3P12645 MIR3192-201ENST00000584920 77 ntBASIC2.17□□□□□ -2.06
BMP3P12645 Y_RNA.788-201ENST00000622394 112 ntBASIC2.17□□□□□ -2.06
BMP3P12645 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.17□□□□□ -2.06
BMP3P12645 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
BMP3P12645 RNA5SP48-201ENST00000363969 126 ntBASIC2.16□□□□□ -2.06
BMP3P12645 RNA5SP37-201ENST00000365420 130 ntBASIC2.16□□□□□ -2.06
BMP3P12645 RNU6-571P-201ENST00000384128 107 ntBASIC2.16□□□□□ -2.06
BMP3P12645 Y_RNA.508-201ENST00000384502 114 ntBASIC2.16□□□□□ -2.06
BMP3P12645 SNORD41-201ENST00000386967 70 ntBASIC2.16□□□□□ -2.06
BMP3P12645 snoU13.11-201ENST00000459219 104 ntBASIC2.16□□□□□ -2.06
BMP3P12645 AC005908.1-201ENST00000468701 347 ntBASIC2.16□□□□□ -2.06
BMP3P12645 SNORD111.1-201ENST00000516421 86 ntBASIC2.16□□□□□ -2.06
BMP3P12645 RNU6-557P-201ENST00000516842 110 ntBASIC2.16□□□□□ -2.06
BMP3P12645 U6.109-201ENST00000636749 87 ntBASIC2.16□□□□□ -2.06
BMP3P12645 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.16□□□□□ -2.06
BMP3P12645 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.16□□□□□ -2.06
BMP3P12645 Y_RNA.119-201ENST00000363301 96 ntBASIC2.15□□□□□ -2.07
BMP3P12645 MIR9-3-201ENST00000385084 90 ntBASIC2.15□□□□□ -2.07
BMP3P12645 BX276092.1-201ENST00000427368 251 ntBASIC2.15□□□□□ -2.07
BMP3P12645 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.15□□□□□ -2.07
BMP3P12645 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
BMP3P12645 MIR6740-201ENST00000618268 113 ntBASIC2.15□□□□□ -2.07
BMP3P12645 AC008163.1-202ENST00000636004 2889 ntBASIC2.14□□□□□ -2.07
BMP3P12645 MIR30D-201ENST00000362283 70 ntBASIC2.14□□□□□ -2.07
BMP3P12645 MIRLET7A1-201ENST00000362295 80 ntBASIC2.14□□□□□ -2.07
BMP3P12645 SNORA63.2-201ENST00000362603 126 ntBASIC2.14□□□□□ -2.07
BMP3P12645 SNORA3A-201ENST00000364113 130 ntBASIC2.14□□□□□ -2.07
BMP3P12645 RNU1-52P-201ENST00000384190 164 ntBASIC2.14□□□□□ -2.07
BMP3P12645 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.14□□□□□ -2.07
BMP3P12645 AC079804.2-201ENST00000490376 200 ntBASIC2.14□□□□□ -2.07
BMP3P12645 MIR4796-201ENST00000580742 81 ntBASIC2.14□□□□□ -2.07
BMP3P12645 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.14□□□□□ -2.07
BMP3P12645 Y_RNA.164-201ENST00000363709 102 ntBASIC2.13□□□□□ -2.07
BMP3P12645 RNA5SP259-201ENST00000365541 109 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms