Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
COL6A2P12110 AC108667.1-201ENST00000428618 249 ntBASIC1.63□□□□□ -2.15
COL6A2P12110 MIR8081-201ENST00000611533 95 ntBASIC1.63□□□□□ -2.15
COL6A2P12110 SEPT14P17-201ENST00000617978 177 ntBASIC1.63□□□□□ -2.15
COL6A2P12110 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
COL6A2P12110 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL6A2P12110 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL6A2P12110 Y_RNA.93-201ENST00000363066 109 ntBASIC1.62□□□□□ -2.15
COL6A2P12110 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.62□□□□□ -2.15
COL6A2P12110 AC048334.1-201ENST00000477975 159 ntBASIC1.62□□□□□ -2.15
COL6A2P12110 SCARNA23-201ENST00000516060 130 ntBASIC1.62□□□□□ -2.15
COL6A2P12110 AL442128.1-201ENST00000615151 90 ntBASIC1.62□□□□□ -2.15
COL6A2P12110 AL512310.12-203ENST00000640543 90 ntBASIC1.62□□□□□ -2.15
COL6A2P12110 Y_RNA.168-201ENST00000363740 102 ntBASIC1.61□□□□□ -2.15
COL6A2P12110 RNU6-905P-201ENST00000384434 107 ntBASIC1.61□□□□□ -2.15
COL6A2P12110 MT-TF-201ENST00000387314 71 ntBASIC1.61□□□□□ -2.15
COL6A2P12110 RNU6-205P-201ENST00000390858 107 ntBASIC1.61□□□□□ -2.15
COL6A2P12110 RNU6-1321P-201ENST00000390905 107 ntBASIC1.61□□□□□ -2.15
COL6A2P12110 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.61□□□□□ -2.15
COL6A2P12110 RNU6-1165P-201ENST00000410119 107 ntBASIC1.61□□□□□ -2.15
COL6A2P12110 RNU7-62P-201ENST00000458856 62 ntBASIC1.61□□□□□ -2.15
COL6A2P12110 SNORA40.13-201ENST00000516379 120 ntBASIC1.61□□□□□ -2.15
COL6A2P12110 snoU13.31-201ENST00000607291 104 ntBASIC1.61□□□□□ -2.15
COL6A2P12110 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.61□□□□□ -2.15
COL6A2P12110 MIR2052-201ENST00000636055 55 ntBASIC1.61□□□□□ -2.15
COL6A2P12110 AL161722.3-201ENST00000605789 2983 ntBASIC1.61□□□□□ -2.15
COL6A2P12110 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL6A2P12110 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.6□□□□□ -2.15
COL6A2P12110 Y_RNA.98-201ENST00000363109 102 ntBASIC1.6□□□□□ -2.15
COL6A2P12110 Y_RNA.118-201ENST00000363300 101 ntBASIC1.6□□□□□ -2.15
COL6A2P12110 RNU6-654P-201ENST00000364373 107 ntBASIC1.6□□□□□ -2.15
COL6A2P12110 Y_RNA.466-201ENST00000384294 113 ntBASIC1.6□□□□□ -2.15
COL6A2P12110 Y_RNA.508-201ENST00000384502 114 ntBASIC1.6□□□□□ -2.15
COL6A2P12110 RNU6-1307P-201ENST00000391012 103 ntBASIC1.6□□□□□ -2.15
COL6A2P12110 AC096949.1-201ENST00000412047 152 ntBASIC1.6□□□□□ -2.15
COL6A2P12110 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.6□□□□□ -2.15
COL6A2P12110 UBL5P1-201ENST00000507979 193 ntBASIC1.6□□□□□ -2.15
COL6A2P12110 RNU6-109P-201ENST00000516364 107 ntBASIC1.6□□□□□ -2.15
COL6A2P12110 RNU6-184P-201ENST00000516514 107 ntBASIC1.6□□□□□ -2.15
COL6A2P12110 RNA5SP170-201ENST00000517150 101 ntBASIC1.6□□□□□ -2.15
COL6A2P12110 SNORA4-201ENST00000584302 138 ntBASIC1.6□□□□□ -2.15
COL6A2P12110 MIR337-201ENST00000362281 93 ntBASIC1.59□□□□□ -2.15
COL6A2P12110 RNU6-640P-201ENST00000363693 105 ntBASIC1.59□□□□□ -2.15
COL6A2P12110 Y_RNA.448-201ENST00000384185 108 ntBASIC1.59□□□□□ -2.15
COL6A2P12110 MTATP8P2-201ENST00000435212 202 ntBASIC1.59□□□□□ -2.15
COL6A2P12110 MIR18B-201ENST00000454574 71 ntBASIC1.59□□□□□ -2.15
COL6A2P12110 RNU7-48P-201ENST00000458875 63 ntBASIC1.59□□□□□ -2.15
COL6A2P12110 SNORA31.2-201ENST00000516019 134 ntBASIC1.59□□□□□ -2.15
COL6A2P12110 SNORA25.15-201ENST00000516487 89 ntBASIC1.59□□□□□ -2.15
COL6A2P12110 RNU6-1006P-201ENST00000516998 103 ntBASIC1.59□□□□□ -2.15
COL6A2P12110 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
COL6A2P12110 AC096720.1-201ENST00000604441 183 ntBASIC1.58□□□□□ -2.16
COL6A2P12110 AC105081.1-201ENST00000617727 106 ntBASIC1.58□□□□□ -2.16
COL6A2P12110 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL6A2P12110 MIR378A-201ENST00000362177 66 ntBASIC1.57□□□□□ -2.16
COL6A2P12110 Y_RNA.43-201ENST00000362670 111 ntBASIC1.57□□□□□ -2.16
COL6A2P12110 SNORD38.1-201ENST00000363863 68 ntBASIC1.57□□□□□ -2.16
COL6A2P12110 SNORD45B-201ENST00000364617 72 ntBASIC1.57□□□□□ -2.16
COL6A2P12110 RNU6-865P-201ENST00000364772 107 ntBASIC1.57□□□□□ -2.16
COL6A2P12110 Y_RNA.363-201ENST00000365529 113 ntBASIC1.57□□□□□ -2.16
COL6A2P12110 SNORA17.3-201ENST00000391159 129 ntBASIC1.57□□□□□ -2.16
COL6A2P12110 MIR4439-201ENST00000583746 80 ntBASIC1.57□□□□□ -2.16
COL6A2P12110 MIR376B-201ENST00000614515 100 ntBASIC1.57□□□□□ -2.16
COL6A2P12110 Y_RNA.107-201ENST00000363190 121 ntBASIC1.56□□□□□ -2.16
COL6A2P12110 SNORD113.3-201ENST00000364630 78 ntBASIC1.56□□□□□ -2.16
COL6A2P12110 RNY1P2-201ENST00000364820 117 ntBASIC1.56□□□□□ -2.16
COL6A2P12110 Y_RNA.355-201ENST00000365462 98 ntBASIC1.56□□□□□ -2.16
COL6A2P12110 MIR34C-201ENST00000384831 77 ntBASIC1.56□□□□□ -2.16
COL6A2P12110 U8.15-201ENST00000390947 134 ntBASIC1.56□□□□□ -2.16
COL6A2P12110 RNU6-321P-201ENST00000410912 106 ntBASIC1.56□□□□□ -2.16
COL6A2P12110 AC133485.1-201ENST00000567176 124 ntBASIC1.56□□□□□ -2.16
COL6A2P12110 AC012676.2-201ENST00000619258 186 ntBASIC1.56□□□□□ -2.16
COL6A2P12110 AP001362.1-201ENST00000625165 124 ntBASIC1.56□□□□□ -2.16
COL6A2P12110 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
COL6A2P12110 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
COL6A2P12110 RNU6-170P-201ENST00000362832 104 ntBASIC1.55□□□□□ -2.16
COL6A2P12110 SNORA75.2-201ENST00000391138 150 ntBASIC1.55□□□□□ -2.16
COL6A2P12110 SNORA75.3-201ENST00000391231 150 ntBASIC1.55□□□□□ -2.16
COL6A2P12110 RNA5SP95-201ENST00000410319 137 ntBASIC1.55□□□□□ -2.16
COL6A2P12110 AL591704.2-201ENST00000421658 181 ntBASIC1.55□□□□□ -2.16
COL6A2P12110 AC036111.3-201ENST00000526389 112 ntBASIC1.55□□□□□ -2.16
COL6A2P12110 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.55□□□□□ -2.16
COL6A2P12110 uc_338.6-201ENST00000613544 171 ntBASIC1.55□□□□□ -2.16
COL6A2P12110 SNORA80D-201ENST00000384488 135 ntBASIC1.54□□□□□ -2.16
COL6A2P12110 MIR499A-201ENST00000384903 122 ntBASIC1.54□□□□□ -2.16
COL6A2P12110 AC004941.2-201ENST00000427009 228 ntBASIC1.54□□□□□ -2.16
COL6A2P12110 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
COL6A2P12110 RNU7-21P-201ENST00000459430 62 ntBASIC1.54□□□□□ -2.16
COL6A2P12110 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
COL6A2P12110 MIR8070-201ENST00000616510 88 ntBASIC1.54□□□□□ -2.16
COL6A2P12110 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.54□□□□□ -2.16
COL6A2P12110 Y_RNA.95-201ENST00000363079 95 ntBASIC1.53□□□□□ -2.16
COL6A2P12110 RNY1P10-201ENST00000363268 113 ntBASIC1.53□□□□□ -2.16
COL6A2P12110 Y_RNA.247-201ENST00000364500 92 ntBASIC1.53□□□□□ -2.16
COL6A2P12110 RNA5SP190-201ENST00000365222 118 ntBASIC1.53□□□□□ -2.16
COL6A2P12110 Y_RNA.369-201ENST00000365568 117 ntBASIC1.53□□□□□ -2.16
COL6A2P12110 SNORD111-201ENST00000408139 94 ntBASIC1.53□□□□□ -2.16
COL6A2P12110 BTF3P4-201ENST00000418852 495 ntBASIC1.53□□□□□ -2.16
COL6A2P12110 RPS29P28-201ENST00000446439 141 ntBASIC1.53□□□□□ -2.16
COL6A2P12110 SNORD13-201ENST00000459299 104 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 711.6 ms