Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.06□□□□□ -2.42
COL4A1P02462 RNU6-238P-201ENST00000363313 106 ntBASIC-0.06□□□□□ -2.42
COL4A1P02462 SNORA18-201ENST00000384416 132 ntBASIC-0.06□□□□□ -2.42
COL4A1P02462 SNORA20-201ENST00000384662 132 ntBASIC-0.06□□□□□ -2.42
COL4A1P02462 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
COL4A1P02462 RNU4-63P-201ENST00000411313 118 ntBASIC-0.06□□□□□ -2.42
COL4A1P02462 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.06□□□□□ -2.42
COL4A1P02462 RNA5SP33-201ENST00000516687 98 ntBASIC-0.06□□□□□ -2.42
COL4A1P02462 RNU6-531P-201ENST00000516694 104 ntBASIC-0.06□□□□□ -2.42
COL4A1P02462 SCARNA15-202ENST00000516881 127 ntBASIC-0.06□□□□□ -2.42
COL4A1P02462 AL365265.1-201ENST00000621045 234 ntBASIC-0.06□□□□□ -2.42
COL4A1P02462 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.06□□□□□ -2.42
COL4A1P02462 AC021613.1-201ENST00000623880 111 ntBASIC-0.06□□□□□ -2.42
COL4A1P02462 AL162376.1-201ENST00000624117 175 ntBASIC-0.06□□□□□ -2.42
COL4A1P02462 MIR101-2-201ENST00000362195 79 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 SNORD114-12-201ENST00000365400 75 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 SNORA33.2-201ENST00000365413 134 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 RNU6-429P-201ENST00000384582 108 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 MIR548P-201ENST00000408336 84 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 AL121914.1-201ENST00000450188 156 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 DEFB131E-201ENST00000532329 154 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 MIR378D2-201ENST00000580636 98 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 MIR4680-201ENST00000580906 66 ntBASIC-0.07□□□□□ -2.42
COL4A1P02462 RNA5SP133-201ENST00000363368 119 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 MIR624-201ENST00000385217 97 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 MIR760-201ENST00000390220 80 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 RNU6-578P-201ENST00000390980 103 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 MIR1302-6-201ENST00000408466 90 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 MIR548H2-201ENST00000408874 88 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 RNU4-43P-201ENST00000410628 137 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 RNU6-635P-201ENST00000516651 102 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 RNU2-60P-201ENST00000517290 128 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 MIR5706-201ENST00000579841 80 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 MIR4743-201ENST00000584576 69 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 SNORD115-2-201ENST00000362842 82 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 SNORD115-20-201ENST00000365099 82 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 RNA5SP128-201ENST00000365305 116 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 MT-TW-201ENST00000387382 68 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 RNU7-113P-201ENST00000459273 62 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 AC138749.4-201ENST00000563970 127 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 AC006504.6-201ENST00000590142 199 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 MIR376A2-201ENST00000636782 80 ntBASIC-0.08□□□□□ -2.42
COL4A1P02462 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.09□□□□□ -2.42
COL4A1P02462 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.09□□□□□ -2.42
COL4A1P02462 SNORA32.1-201ENST00000364514 115 ntBASIC-0.09□□□□□ -2.42
COL4A1P02462 RNU6-187P-201ENST00000384139 106 ntBASIC-0.09□□□□□ -2.42
COL4A1P02462 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.09□□□□□ -2.42
COL4A1P02462 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.09□□□□□ -2.42
COL4A1P02462 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.09□□□□□ -2.42
COL4A1P02462 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.09□□□□□ -2.42
COL4A1P02462 MIR224-201ENST00000384889 81 ntBASIC-0.09□□□□□ -2.42
COL4A1P02462 RNU6-381P-201ENST00000391259 108 ntBASIC-0.09□□□□□ -2.42
COL4A1P02462 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.09□□□□□ -2.42
COL4A1P02462 AC009779.6-201ENST00000603972 165 ntBASIC-0.09□□□□□ -2.42
COL4A1P02462 MIR7107-201ENST00000611489 80 ntBASIC-0.09□□□□□ -2.42
COL4A1P02462 RNU4-32P-201ENST00000363404 141 ntBASIC-0.1□□□□□ -2.43
COL4A1P02462 SNORA42.1-201ENST00000363515 137 ntBASIC-0.1□□□□□ -2.43
COL4A1P02462 RNU6-103P-201ENST00000363686 107 ntBASIC-0.1□□□□□ -2.43
COL4A1P02462 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.1□□□□□ -2.43
COL4A1P02462 SNORA72.6-201ENST00000384520 129 ntBASIC-0.1□□□□□ -2.43
COL4A1P02462 SNORA32.3-201ENST00000384772 121 ntBASIC-0.1□□□□□ -2.43
COL4A1P02462 BX276092.1-201ENST00000427368 251 ntBASIC-0.1□□□□□ -2.43
COL4A1P02462 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.1□□□□□ -2.43
COL4A1P02462 AL442663.2-201ENST00000554385 511 ntBASIC-0.1□□□□□ -2.43
COL4A1P02462 MIR5197-201ENST00000583721 112 ntBASIC-0.1□□□□□ -2.43
COL4A1P02462 MIR3925-201ENST00000584674 77 ntBASIC-0.1□□□□□ -2.43
COL4A1P02462 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.1□□□□□ -2.43
COL4A1P02462 SNORA22.1-201ENST00000362701 134 ntBASIC-0.11□□□□□ -2.43
COL4A1P02462 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.11□□□□□ -2.43
COL4A1P02462 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.11□□□□□ -2.43
COL4A1P02462 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.11□□□□□ -2.43
COL4A1P02462 SNORD114-10-201ENST00000363409 72 ntBASIC-0.11□□□□□ -2.43
COL4A1P02462 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.11□□□□□ -2.43
COL4A1P02462 RNY1P6-201ENST00000384193 109 ntBASIC-0.11□□□□□ -2.43
COL4A1P02462 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
COL4A1P02462 PCNPP3-201ENST00000393579 471 ntBASIC-0.11□□□□□ -2.43
COL4A1P02462 RNA5SP451-201ENST00000410588 110 ntBASIC-0.11□□□□□ -2.43
COL4A1P02462 MTND4LP11-201ENST00000422184 280 ntBASIC-0.11□□□□□ -2.43
COL4A1P02462 MTATP6P23-201ENST00000440153 476 ntBASIC-0.11□□□□□ -2.43
COL4A1P02462 RNU7-165P-201ENST00000458864 60 ntBASIC-0.11□□□□□ -2.43
COL4A1P02462 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.11□□□□□ -2.43
COL4A1P02462 RNU6-180P-201ENST00000516697 61 ntBASIC-0.11□□□□□ -2.43
COL4A1P02462 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms