Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
ABCA1O95477 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 RNU2-31P-201ENST00000516954 155 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 RNU6-835P-201ENST00000516974 104 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 RNU6-973P-201ENST00000364690 107 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 RPS29P25-201ENST00000481709 171 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 SNORD63.1-201ENST00000516178 80 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 MIR5701-3-201ENST00000578890 82 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 MIR5701-1-201ENST00000585138 82 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 MIR5701-2-201ENST00000615634 82 ntBASIC-1.15□□□□□ -2.59
ABCA1O95477 RNU6-746P-201ENST00000384112 109 ntBASIC-1.16□□□□□ -2.6
ABCA1O95477 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.16□□□□□ -2.6
ABCA1O95477 MIR216B-201ENST00000390186 82 ntBASIC-1.16□□□□□ -2.6
ABCA1O95477 RNU6-588P-201ENST00000410281 105 ntBASIC-1.16□□□□□ -2.6
ABCA1O95477 RNU6-273P-201ENST00000516937 96 ntBASIC-1.16□□□□□ -2.6
ABCA1O95477 MTND3P12-201ENST00000559068 328 ntBASIC-1.16□□□□□ -2.6
ABCA1O95477 MIR3145-201ENST00000580727 82 ntBASIC-1.16□□□□□ -2.6
ABCA1O95477 RNA5SP26-201ENST00000362406 119 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 SNORD81.1-201ENST00000363064 77 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 MIR620-201ENST00000385232 95 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.17□□□□□ -2.6
ABCA1O95477 RNU7-113P-201ENST00000459273 62 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 SNORD77.4-201ENST00000516158 81 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 AL512360.1-201ENST00000555346 234 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 MIR5692C2-201ENST00000577959 77 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 MIR3942-201ENST00000585264 109 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 AL365205.2-201ENST00000594586 68 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 MIR519E-201ENST00000385075 84 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 MT-TT-201ENST00000387460 66 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 MIR548H3-201ENST00000408771 118 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.17□□□□□ -2.6
ABCA1O95477 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.17□□□□□ -2.6
ABCA1O95477 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.18□□□□□ -2.6
ABCA1O95477 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.18□□□□□ -2.6
ABCA1O95477 RNU6-831P-201ENST00000384548 107 ntBASIC-1.18□□□□□ -2.6
ABCA1O95477 MIR652-201ENST00000385278 98 ntBASIC-1.18□□□□□ -2.6
ABCA1O95477 AC244090.1-201ENST00000441884 93 ntBASIC-1.18□□□□□ -2.6
ABCA1O95477 MIR5197-201ENST00000583721 112 ntBASIC-1.18□□□□□ -2.6
ABCA1O95477 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.18□□□□□ -2.6
ABCA1O95477 SNORD115-23-201ENST00000364461 82 ntBASIC-1.18□□□□□ -2.6
ABCA1O95477 MIR599-201ENST00000385069 95 ntBASIC-1.18□□□□□ -2.6
ABCA1O95477 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.18□□□□□ -2.6
ABCA1O95477 RNU6-720P-201ENST00000516363 108 ntBASIC-1.18□□□□□ -2.6
ABCA1O95477 AC144568.1-201ENST00000520139 137 ntBASIC-1.18□□□□□ -2.6
ABCA1O95477 AC091932.4-201ENST00000623386 200 ntBASIC-1.18□□□□□ -2.6
ABCA1O95477 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.18□□□□□ -2.6
ABCA1O95477 RNA5SP405-201ENST00000363059 114 ntBASIC-1.19□□□□□ -2.6
ABCA1O95477 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.19□□□□□ -2.6
ABCA1O95477 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.19□□□□□ -2.6
ABCA1O95477 RNU6-553P-201ENST00000364047 96 ntBASIC-1.19□□□□□ -2.6
ABCA1O95477 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.19□□□□□ -2.6
ABCA1O95477 MIR582-201ENST00000365731 98 ntBASIC-1.19□□□□□ -2.6
ABCA1O95477 MT-TM-201ENST00000387377 68 ntBASIC-1.19□□□□□ -2.6
ABCA1O95477 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.19□□□□□ -2.6
ABCA1O95477 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.19□□□□□ -2.6
ABCA1O95477 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.19□□□□□ -2.6
ABCA1O95477 MIR519A1-201ENST00000385257 85 ntBASIC-1.19□□□□□ -2.6
ABCA1O95477 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.19□□□□□ -2.6
ABCA1O95477 AL603914.1-201ENST00000401964 204 ntBASIC-1.19□□□□□ -2.6
ABCA1O95477 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.19□□□□□ -2.6
ABCA1O95477 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.19□□□□□ -2.6
ABCA1O95477 RNU6-208P-201ENST00000362431 107 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 RNU4-50P-201ENST00000364361 141 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 RNU6-259P-201ENST00000383999 107 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 SNORD63-201ENST00000384262 68 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 AC097510.1-201ENST00000510945 133 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 MIR4659A-201ENST00000580269 81 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 snoR1.1-201ENST00000628177 80 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 AC024614.3-201ENST00000637860 256 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 SNORA53-201ENST00000391141 249 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 AC133104.2-201ENST00000615272 193 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 MIR6841-201ENST00000637129 72 ntBASIC-1.2□□□□□ -2.6
ABCA1O95477 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.21□□□□□ -2.6
ABCA1O95477 RNU6-54P-201ENST00000365563 107 ntBASIC-1.21□□□□□ -2.6
ABCA1O95477 RNU2-66P-201ENST00000410650 161 ntBASIC-1.21□□□□□ -2.6
ABCA1O95477 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-1.21□□□□□ -2.6
ABCA1O95477 RNA5SP153-201ENST00000516498 76 ntBASIC-1.21□□□□□ -2.6
ABCA1O95477 AC021613.1-201ENST00000623880 111 ntBASIC-1.21□□□□□ -2.6
ABCA1O95477 RNU6-763P-201ENST00000390865 106 ntBASIC-1.22□□□□□ -2.6
ABCA1O95477 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.22□□□□□ -2.6
ABCA1O95477 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.22□□□□□ -2.6
ABCA1O95477 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.22□□□□□ -2.6
ABCA1O95477 RNU6-307P-201ENST00000516743 106 ntBASIC-1.22□□□□□ -2.6
ABCA1O95477 RNU7-70P-201ENST00000516941 66 ntBASIC-1.22□□□□□ -2.6
ABCA1O95477 U6.92-201ENST00000636464 89 ntBASIC-1.22□□□□□ -2.6
ABCA1O95477 AL669831.3-213ENST00000636676 183 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms