Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 DEFB108A-201ENST00000530110 222 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 AC008507.4-201ENST00000585464 127 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 AC245884.10-201ENST00000597355 337 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 AL445264.1-201ENST00000621719 171 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 SNORD115-38-201ENST00000365037 82 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 MIR16-1-201ENST00000385271 89 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 RNU6-176P-201ENST00000517196 105 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 AC141846.1-201ENST00000568348 142 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 AL391262.2-201ENST00000622466 494 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 AC068137.4-201ENST00000638485 296 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 RNU4-70P-201ENST00000384579 139 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 RNU2-66P-201ENST00000410650 161 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 SNORA20-201ENST00000384662 132 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 AL021707.8-201ENST00000609428 183 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 RNU6-170P-201ENST00000362832 104 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 RNU6-755P-201ENST00000364400 103 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 RNU6-597P-201ENST00000365620 102 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 MIR206-201ENST00000384872 86 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 RNU6-885P-201ENST00000516607 104 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.12□□□□□ -2.59
USH2AO75445 AC048344.4-201ENST00000619744 527 ntBASIC-1.12□□□□□ -2.59
USH2AO75445 RNU6-371P-201ENST00000364283 108 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.13□□□□□ -2.59
USH2AO75445 AL512360.1-201ENST00000555346 234 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 CYP3A54P-201ENST00000566950 75 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 MIR4500-201ENST00000579472 76 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 AC011476.5-201ENST00000615594 130 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 AL158209.2-201ENST00000619266 216 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 MTCO2P21-201ENST00000419780 677 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 EIF1P2-201ENST00000428233 350 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 RNU7-160P-201ENST00000516660 62 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 RNU7-70P-201ENST00000516941 66 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 RNU6-260P-201ENST00000384092 107 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 MIR656-201ENST00000385224 78 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 snoU13.6-201ENST00000458785 104 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 AC005828.6-201ENST00000606610 232 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 MIR217-201ENST00000384817 110 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 RNU7-25P-201ENST00000516544 62 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.13□□□□□ -2.59
USH2AO75445 AC005014.3-201ENST00000605985 190 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 AC092574.1-201ENST00000609771 420 ntBASIC-1.13□□□□□ -2.59
USH2AO75445 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 RNU6-243P-201ENST00000391140 107 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 SNORA25.14-201ENST00000516481 132 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 AL353193.1-201ENST00000421444 268 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 RNU6-300P-201ENST00000459080 104 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 RNU7-137P-201ENST00000516788 62 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 RNU6-495P-201ENST00000362995 107 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 RNU6-254P-201ENST00000363377 107 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 RNU6-280P-201ENST00000364145 104 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 RNU6-935P-201ENST00000410371 100 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.14□□□□□ -2.59
USH2AO75445 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 MTCO2P3-201ENST00000442543 421 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 AC024933.1-201ENST00000608472 348 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 AC007494.3-201ENST00000624660 743 ntBASIC-1.14□□□□□ -2.59
USH2AO75445 RNU6-692P-201ENST00000384496 107 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 MIR548AA1-201ENST00000384971 97 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 MIR545-201ENST00000385085 106 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.15□□□□□ -2.59
USH2AO75445 MTND3P1-201ENST00000441336 220 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 ADI1P3-201ENST00000549509 470 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 MIR5692C2-201ENST00000577959 77 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 AC073539.2-201ENST00000597113 165 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 AC090425.1-201ENST00000610007 140 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 AC012409.4-201ENST00000612923 249 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 SNORD116-9-201ENST00000384000 95 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 SNORD116-3-201ENST00000384287 95 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 SNORD116-8-201ENST00000384365 95 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 SNORD116-7-201ENST00000384404 95 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 SNORD116-5-201ENST00000384462 95 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.15□□□□□ -2.59
USH2AO75445 RNU7-45P-201ENST00000459460 63 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 RNU7-106P-201ENST00000459514 67 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 RNU6-77P-201ENST00000410554 91 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 SEPT14P8-201ENST00000508026 178 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 RNU6-523P-201ENST00000516304 54 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 AC174048.1-201ENST00000603389 144 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 AL158063.1-201ENST00000615349 536 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 RNU6-792P-201ENST00000363490 107 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 SNORD58A-201ENST00000383875 65 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 RNU6-649P-201ENST00000384463 107 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 MTND2P18-201ENST00000419962 1030 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 AC009961.2-201ENST00000435771 251 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms