Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNU6-1054P-201ENST00000411293 104 ntBASIC1.8□□□□□ -2.12
VAMP4O75379 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.8□□□□□ -2.12
VAMP4O75379 RNU6-109P-201ENST00000516364 107 ntBASIC1.8□□□□□ -2.12
VAMP4O75379 RNU6-184P-201ENST00000516514 107 ntBASIC1.8□□□□□ -2.12
VAMP4O75379 SNORD67.1-201ENST00000516618 108 ntBASIC1.8□□□□□ -2.12
VAMP4O75379 RNU6-165P-201ENST00000517170 99 ntBASIC1.8□□□□□ -2.12
VAMP4O75379 AL512310.8-201ENST00000550183 120 ntBASIC1.8□□□□□ -2.12
VAMP4O75379 AL662814.1-201ENST00000617364 121 ntBASIC1.8□□□□□ -2.12
VAMP4O75379 RNU6-1255P-201ENST00000363434 112 ntBASIC1.79□□□□□ -2.12
VAMP4O75379 RNU6-1201P-201ENST00000384227 107 ntBASIC1.79□□□□□ -2.12
VAMP4O75379 Y_RNA.466-201ENST00000384294 113 ntBASIC1.79□□□□□ -2.12
VAMP4O75379 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.79□□□□□ -2.12
VAMP4O75379 MTATP8P2-201ENST00000435212 202 ntBASIC1.79□□□□□ -2.12
VAMP4O75379 RNU7-137P-201ENST00000516788 62 ntBASIC1.79□□□□□ -2.12
VAMP4O75379 AC141846.1-201ENST00000568348 142 ntBASIC1.79□□□□□ -2.12
VAMP4O75379 AP000753.3-201ENST00000604083 169 ntBASIC1.79□□□□□ -2.12
VAMP4O75379 AL512310.12-203ENST00000640543 90 ntBASIC1.79□□□□□ -2.12
VAMP4O75379 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VAMP4O75379 ZNF209P-201ENST00000593450 2304 ntBASIC1.79□□□□□ -2.12
VAMP4O75379 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.78□□□□□ -2.12
VAMP4O75379 MIR377-201ENST00000362145 69 ntBASIC1.78□□□□□ -2.12
VAMP4O75379 RNU6-997P-201ENST00000384725 107 ntBASIC1.78□□□□□ -2.12
VAMP4O75379 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
VAMP4O75379 RNU6-613P-201ENST00000410412 108 ntBASIC1.78□□□□□ -2.12
VAMP4O75379 AC096949.1-201ENST00000412047 152 ntBASIC1.78□□□□□ -2.12
VAMP4O75379 AL512598.1-201ENST00000610158 273 ntBASIC1.78□□□□□ -2.12
VAMP4O75379 AL442128.1-201ENST00000615151 90 ntBASIC1.78□□□□□ -2.12
VAMP4O75379 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.78□□□□□ -2.12
VAMP4O75379 MIR6516-201ENST00000630554 81 ntBASIC1.78□□□□□ -2.12
VAMP4O75379 AL161722.3-201ENST00000605789 2983 ntBASIC1.77□□□□□ -2.13
VAMP4O75379 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
VAMP4O75379 MIR103A2-201ENST00000362154 78 ntBASIC1.77□□□□□ -2.13
VAMP4O75379 RNU6-580P-201ENST00000365159 107 ntBASIC1.77□□□□□ -2.13
VAMP4O75379 Y_RNA.369-201ENST00000365568 117 ntBASIC1.77□□□□□ -2.13
VAMP4O75379 RNU6-949P-201ENST00000384040 107 ntBASIC1.77□□□□□ -2.13
VAMP4O75379 MIR588-201ENST00000384900 83 ntBASIC1.77□□□□□ -2.13
VAMP4O75379 AC108729.3-201ENST00000513484 108 ntBASIC1.77□□□□□ -2.13
VAMP4O75379 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.77□□□□□ -2.13
VAMP4O75379 MIR5582-201ENST00000579697 68 ntBASIC1.77□□□□□ -2.13
VAMP4O75379 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
VAMP4O75379 RPS27P16-201ENST00000425758 201 ntBASIC1.76□□□□□ -2.13
VAMP4O75379 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.76□□□□□ -2.13
VAMP4O75379 MIR6740-201ENST00000618268 113 ntBASIC1.76□□□□□ -2.13
VAMP4O75379 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
VAMP4O75379 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
VAMP4O75379 MIR337-201ENST00000362281 93 ntBASIC1.75□□□□□ -2.13
VAMP4O75379 Y_RNA.98-201ENST00000363109 102 ntBASIC1.75□□□□□ -2.13
VAMP4O75379 Y_RNA.107-201ENST00000363190 121 ntBASIC1.75□□□□□ -2.13
VAMP4O75379 RNU6-1321P-201ENST00000390905 107 ntBASIC1.75□□□□□ -2.13
VAMP4O75379 UBL5P1-201ENST00000507979 193 ntBASIC1.75□□□□□ -2.13
VAMP4O75379 RNU6-902P-201ENST00000517212 91 ntBASIC1.75□□□□□ -2.13
VAMP4O75379 MIR4421-201ENST00000578133 69 ntBASIC1.75□□□□□ -2.13
VAMP4O75379 AC096720.1-201ENST00000604441 183 ntBASIC1.75□□□□□ -2.13
VAMP4O75379 MIR378A-201ENST00000362177 66 ntBASIC1.74□□□□□ -2.13
VAMP4O75379 SNORD45B-201ENST00000364617 72 ntBASIC1.74□□□□□ -2.13
VAMP4O75379 RNY4P30-201ENST00000410216 95 ntBASIC1.74□□□□□ -2.13
VAMP4O75379 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.74□□□□□ -2.13
VAMP4O75379 MIR30D-201ENST00000362283 70 ntBASIC1.73□□□□□ -2.13
VAMP4O75379 RNU6-170P-201ENST00000362832 104 ntBASIC1.73□□□□□ -2.13
VAMP4O75379 Y_RNA.338-201ENST00000365320 114 ntBASIC1.73□□□□□ -2.13
VAMP4O75379 Y_RNA.448-201ENST00000384185 108 ntBASIC1.73□□□□□ -2.13
VAMP4O75379 RNU6-1307P-201ENST00000391012 103 ntBASIC1.73□□□□□ -2.13
VAMP4O75379 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.73□□□□□ -2.13
VAMP4O75379 RNU7-48P-201ENST00000458875 63 ntBASIC1.73□□□□□ -2.13
VAMP4O75379 RNU6-1006P-201ENST00000516998 103 ntBASIC1.73□□□□□ -2.13
VAMP4O75379 AC068338.1-201ENST00000565567 176 ntBASIC1.73□□□□□ -2.13
VAMP4O75379 MIR4439-201ENST00000583746 80 ntBASIC1.73□□□□□ -2.13
VAMP4O75379 SNORD38.1-201ENST00000363863 68 ntBASIC1.72□□□□□ -2.13
VAMP4O75379 RNU6-865P-201ENST00000364772 107 ntBASIC1.72□□□□□ -2.13
VAMP4O75379 RNU6-1165P-201ENST00000410119 107 ntBASIC1.72□□□□□ -2.13
VAMP4O75379 AC004941.2-201ENST00000427009 228 ntBASIC1.72□□□□□ -2.13
VAMP4O75379 RNU7-62P-201ENST00000458856 62 ntBASIC1.72□□□□□ -2.13
VAMP4O75379 RNU1-123P-201ENST00000458950 160 ntBASIC1.72□□□□□ -2.13
VAMP4O75379 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.71□□□□□ -2.14
VAMP4O75379 Y_RNA.96-201ENST00000363092 109 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 MT-TF-201ENST00000387314 71 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 RNU6-205P-201ENST00000390858 107 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 RPS29P23-201ENST00000458635 123 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 AC004223.1-201ENST00000479840 271 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 RN7SKP88-201ENST00000516847 250 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 SNORA4-201ENST00000584302 138 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 MIR3660-201ENST00000584845 100 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 7SK.8-201ENST00000612110 250 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 MIR376B-201ENST00000614515 100 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 7SK.11-201ENST00000615477 250 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 AC012531.4-201ENST00000616509 177 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 AC105081.1-201ENST00000617727 106 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 SEPT14P17-201ENST00000617978 177 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 7SK.13-201ENST00000622040 250 ntBASIC1.71□□□□□ -2.14
VAMP4O75379 Y_RNA.95-201ENST00000363079 95 ntBASIC1.7□□□□□ -2.14
VAMP4O75379 Y_RNA.168-201ENST00000363740 102 ntBASIC1.7□□□□□ -2.14
VAMP4O75379 SNORA7.1-201ENST00000363750 139 ntBASIC1.7□□□□□ -2.14
VAMP4O75379 RNY1P2-201ENST00000364820 117 ntBASIC1.7□□□□□ -2.14
VAMP4O75379 MIR34C-201ENST00000384831 77 ntBASIC1.7□□□□□ -2.14
VAMP4O75379 AC133485.1-201ENST00000567176 124 ntBASIC1.7□□□□□ -2.14
VAMP4O75379 AC006254.2-201ENST00000603259 279 ntBASIC1.7□□□□□ -2.14
VAMP4O75379 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VAMP4O75379 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
VAMP4O75379 RNU6-654P-201ENST00000364373 107 ntBASIC1.69□□□□□ -2.14
VAMP4O75379 MIR18B-201ENST00000454574 71 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms