Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
RNF40O75150 MIR6073-201ENST00000352083 89 ntBASIC2.86□□□□□ -1.95
RNF40O75150 RNU6-859P-201ENST00000362728 107 ntBASIC2.86□□□□□ -1.95
RNF40O75150 RNU1-112P-201ENST00000364401 164 ntBASIC2.86□□□□□ -1.95
RNF40O75150 SNORA8.1-201ENST00000384250 140 ntBASIC2.86□□□□□ -1.95
RNF40O75150 RNU6-291P-201ENST00000384720 107 ntBASIC2.86□□□□□ -1.95
RNF40O75150 MT-TN-201ENST00000387400 73 ntBASIC2.86□□□□□ -1.95
RNF40O75150 AL138827.1-201ENST00000402666 306 ntBASIC2.86□□□□□ -1.95
RNF40O75150 MIR2113-201ENST00000459007 91 ntBASIC2.86□□□□□ -1.95
RNF40O75150 AC104984.5-201ENST00000586878 94 ntBASIC2.86□□□□□ -1.95
RNF40O75150 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.86□□□□□ -1.95
RNF40O75150 RNU6-1051P-201ENST00000365471 102 ntBASIC2.85□□□□□ -1.95
RNF40O75150 Y_RNA.588-201ENST00000391254 102 ntBASIC2.85□□□□□ -1.95
RNF40O75150 AC004965.1-201ENST00000413033 213 ntBASIC2.85□□□□□ -1.95
RNF40O75150 DEFB122-202ENST00000569013 197 ntBASIC2.85□□□□□ -1.95
RNF40O75150 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
RNF40O75150 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
RNF40O75150 AL161722.3-201ENST00000605789 2983 ntBASIC2.84□□□□□ -1.95
RNF40O75150 MIR26A1-201ENST00000362205 77 ntBASIC2.84□□□□□ -1.95
RNF40O75150 RNU6-340P-201ENST00000364005 107 ntBASIC2.84□□□□□ -1.95
RNF40O75150 MIR519A1-201ENST00000385257 85 ntBASIC2.84□□□□□ -1.95
RNF40O75150 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RNF40O75150 RNA5SP181-201ENST00000410246 98 ntBASIC2.84□□□□□ -1.95
RNF40O75150 snoU13.25-201ENST00000458945 104 ntBASIC2.84□□□□□ -1.95
RNF40O75150 RNU6-531P-201ENST00000516694 104 ntBASIC2.84□□□□□ -1.95
RNF40O75150 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RNF40O75150 RNU1-51P-201ENST00000365345 176 ntBASIC2.83□□□□□ -1.96
RNF40O75150 MIR9-1-201ENST00000385198 89 ntBASIC2.83□□□□□ -1.96
RNF40O75150 AL606490.4-201ENST00000423117 127 ntBASIC2.83□□□□□ -1.96
RNF40O75150 SNORA25.16-201ENST00000516741 121 ntBASIC2.83□□□□□ -1.96
RNF40O75150 RNU11-2P-201ENST00000516898 142 ntBASIC2.83□□□□□ -1.96
RNF40O75150 MIR4491-201ENST00000581087 68 ntBASIC2.83□□□□□ -1.96
RNF40O75150 U1.36-201ENST00000620684 176 ntBASIC2.83□□□□□ -1.96
RNF40O75150 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.83□□□□□ -1.96
RNF40O75150 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
RNF40O75150 Y_RNA.207-201ENST00000364142 106 ntBASIC2.82□□□□□ -1.96
RNF40O75150 RNU6-396P-201ENST00000365369 105 ntBASIC2.82□□□□□ -1.96
RNF40O75150 MIR9-2-201ENST00000384838 87 ntBASIC2.82□□□□□ -1.96
RNF40O75150 MIR1261-201ENST00000408659 82 ntBASIC2.82□□□□□ -1.96
RNF40O75150 RNA5SP21-201ENST00000410917 96 ntBASIC2.82□□□□□ -1.96
RNF40O75150 RNA5SP450-201ENST00000411206 102 ntBASIC2.82□□□□□ -1.96
RNF40O75150 RNU7-62P-201ENST00000458856 62 ntBASIC2.82□□□□□ -1.96
RNF40O75150 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
RNF40O75150 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.82□□□□□ -1.96
RNF40O75150 RNU4-58P-201ENST00000363192 141 ntBASIC2.81□□□□□ -1.96
RNF40O75150 AL513328.1-201ENST00000446460 224 ntBASIC2.81□□□□□ -1.96
RNF40O75150 RPL30P7-201ENST00000479312 323 ntBASIC2.81□□□□□ -1.96
RNF40O75150 MIR4658-201ENST00000584344 65 ntBASIC2.81□□□□□ -1.96
RNF40O75150 AL137847.3-201ENST00000611521 109 ntBASIC2.81□□□□□ -1.96
RNF40O75150 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
RNF40O75150 MIR377-201ENST00000362145 69 ntBASIC2.8□□□□□ -1.96
RNF40O75150 RNA5SP68-201ENST00000363885 119 ntBASIC2.8□□□□□ -1.96
RNF40O75150 RNU6-205P-201ENST00000390858 107 ntBASIC2.8□□□□□ -1.96
RNF40O75150 Y_RNA.606-201ENST00000410579 103 ntBASIC2.8□□□□□ -1.96
RNF40O75150 TRAJ51-201ENST00000504127 63 ntBASIC2.8□□□□□ -1.96
RNF40O75150 RNU6-250P-201ENST00000516958 103 ntBASIC2.8□□□□□ -1.96
RNF40O75150 RNA5SP402-201ENST00000517148 110 ntBASIC2.8□□□□□ -1.96
RNF40O75150 RNU2-19P-201ENST00000517288 84 ntBASIC2.8□□□□□ -1.96
RNF40O75150 AP003716.2-201ENST00000528260 108 ntBASIC2.8□□□□□ -1.96
RNF40O75150 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.8□□□□□ -1.96
RNF40O75150 MIR6817-201ENST00000615588 66 ntBASIC2.8□□□□□ -1.96
RNF40O75150 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.8□□□□□ -1.96
RNF40O75150 SNORD100-201ENST00000408573 76 ntBASIC2.79□□□□□ -1.96
RNF40O75150 AC244636.1-201ENST00000421152 228 ntBASIC2.79□□□□□ -1.96
RNF40O75150 TRDV1-202ENST00000621643 102 ntBASIC2.79□□□□□ -1.96
RNF40O75150 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.79□□□□□ -1.96
RNF40O75150 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNF40O75150 SNORA25.4-201ENST00000363666 124 ntBASIC2.78□□□□□ -1.96
RNF40O75150 SNORA24B-201ENST00000384176 131 ntBASIC2.78□□□□□ -1.96
RNF40O75150 RNA5SP210-201ENST00000391034 120 ntBASIC2.78□□□□□ -1.96
RNF40O75150 AC093423.1-201ENST00000440817 142 ntBASIC2.78□□□□□ -1.96
RNF40O75150 RNU7-195P-201ENST00000458793 62 ntBASIC2.78□□□□□ -1.96
RNF40O75150 AC008413.1-201ENST00000511864 177 ntBASIC2.78□□□□□ -1.96
RNF40O75150 MTRNR2L2-201ENST00000604882 87 ntBASIC2.78□□□□□ -1.96
RNF40O75150 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RNF40O75150 SNORA25.3-201ENST00000363205 127 ntBASIC2.77□□□□□ -1.97
RNF40O75150 RNU6-499P-201ENST00000365615 107 ntBASIC2.77□□□□□ -1.97
RNF40O75150 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RNF40O75150 RNA5SP148-201ENST00000516527 94 ntBASIC2.77□□□□□ -1.97
RNF40O75150 MIR2115-201ENST00000516657 100 ntBASIC2.77□□□□□ -1.97
RNF40O75150 FO624990.1-201ENST00000636373 85 ntBASIC2.77□□□□□ -1.97
RNF40O75150 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.77□□□□□ -1.97
RNF40O75150 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RNF40O75150 RNU6-1260P-201ENST00000362944 107 ntBASIC2.76□□□□□ -1.97
RNF40O75150 RNU6-53P-201ENST00000365367 106 ntBASIC2.76□□□□□ -1.97
RNF40O75150 Y_RNA.371-201ENST00000365591 113 ntBASIC2.76□□□□□ -1.97
RNF40O75150 Y_RNA.443-201ENST00000384135 111 ntBASIC2.76□□□□□ -1.97
RNF40O75150 MIR513A1-201ENST00000385138 129 ntBASIC2.76□□□□□ -1.97
RNF40O75150 RNU6-630P-201ENST00000391258 106 ntBASIC2.76□□□□□ -1.97
RNF40O75150 RNU6-922P-201ENST00000516753 99 ntBASIC2.76□□□□□ -1.97
RNF40O75150 SNRPGP19-201ENST00000603826 189 ntBASIC2.76□□□□□ -1.97
RNF40O75150 AL049779.4-201ENST00000604500 156 ntBASIC2.76□□□□□ -1.97
RNF40O75150 AL627230.6-201ENST00000611129 280 ntBASIC2.76□□□□□ -1.97
RNF40O75150 U6.81-201ENST00000612550 106 ntBASIC2.76□□□□□ -1.97
RNF40O75150 U6.100-201ENST00000636230 99 ntBASIC2.76□□□□□ -1.97
RNF40O75150 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
RNF40O75150 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
RNF40O75150 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
RNF40O75150 RNA5SP393-201ENST00000363423 117 ntBASIC2.75□□□□□ -1.97
RNF40O75150 SNORD45A-201ENST00000384512 84 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms