Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RNY1P13-201ENST00000365030 105 ntBASIC0.32□□□□□ -2.36
TRAF3IP2O43734 RNA5SP117-201ENST00000365294 118 ntBASIC0.32□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.357-201ENST00000365487 109 ntBASIC0.32□□□□□ -2.36
TRAF3IP2O43734 RNU6-1336P-201ENST00000383886 109 ntBASIC0.32□□□□□ -2.36
TRAF3IP2O43734 AC096949.1-201ENST00000412047 152 ntBASIC0.32□□□□□ -2.36
TRAF3IP2O43734 RNU7-121P-201ENST00000516604 62 ntBASIC0.32□□□□□ -2.36
TRAF3IP2O43734 RNU7-35P-201ENST00000517174 62 ntBASIC0.32□□□□□ -2.36
TRAF3IP2O43734 MIR6844-201ENST00000637122 62 ntBASIC0.32□□□□□ -2.36
TRAF3IP2O43734 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.31□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.85-201ENST00000363014 111 ntBASIC0.31□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.174-201ENST00000363781 105 ntBASIC0.31□□□□□ -2.36
TRAF3IP2O43734 RNU6-716P-201ENST00000365621 103 ntBASIC0.31□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.497-201ENST00000384447 98 ntBASIC0.31□□□□□ -2.36
TRAF3IP2O43734 RNU6-1135P-201ENST00000411083 103 ntBASIC0.31□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.793-201ENST00000411222 111 ntBASIC0.31□□□□□ -2.36
TRAF3IP2O43734 RNU7-120P-201ENST00000459334 63 ntBASIC0.31□□□□□ -2.36
TRAF3IP2O43734 RNU6-1194P-201ENST00000516208 104 ntBASIC0.31□□□□□ -2.36
TRAF3IP2O43734 RNU6-135P-201ENST00000516769 101 ntBASIC0.31□□□□□ -2.36
TRAF3IP2O43734 RNU6-1258P-201ENST00000516911 111 ntBASIC0.31□□□□□ -2.36
TRAF3IP2O43734 RNA5SP94-201ENST00000516917 108 ntBASIC0.31□□□□□ -2.36
TRAF3IP2O43734 AP002392.1-201ENST00000537692 208 ntBASIC0.31□□□□□ -2.36
TRAF3IP2O43734 AC092634.7-201ENST00000621022 103 ntBASIC0.31□□□□□ -2.36
TRAF3IP2O43734 RNU6-690P-201ENST00000365242 106 ntBASIC0.3□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.441-201ENST00000384123 112 ntBASIC0.3□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.476-201ENST00000384347 108 ntBASIC0.3□□□□□ -2.36
TRAF3IP2O43734 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAF3IP2O43734 RNU7-113P-201ENST00000459273 62 ntBASIC0.3□□□□□ -2.36
TRAF3IP2O43734 MIR4491-201ENST00000581087 68 ntBASIC0.3□□□□□ -2.36
TRAF3IP2O43734 DNAJC19P2-201ENST00000593340 302 ntBASIC0.3□□□□□ -2.36
TRAF3IP2O43734 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.3□□□□□ -2.36
TRAF3IP2O43734 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.13-201ENST00000362403 112 ntBASIC0.29□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.120-201ENST00000363304 110 ntBASIC0.29□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.171-201ENST00000363760 102 ntBASIC0.29□□□□□ -2.36
TRAF3IP2O43734 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.29□□□□□ -2.36
TRAF3IP2O43734 MIR1197-201ENST00000408818 88 ntBASIC0.29□□□□□ -2.36
TRAF3IP2O43734 SNORA40.8-201ENST00000411034 126 ntBASIC0.29□□□□□ -2.36
TRAF3IP2O43734 SNORD71-201ENST00000411292 86 ntBASIC0.29□□□□□ -2.36
TRAF3IP2O43734 RNU7-79P-201ENST00000516082 62 ntBASIC0.29□□□□□ -2.36
TRAF3IP2O43734 RNU6-469P-201ENST00000516253 101 ntBASIC0.29□□□□□ -2.36
TRAF3IP2O43734 AC022559.1-201ENST00000520905 205 ntBASIC0.29□□□□□ -2.36
TRAF3IP2O43734 MIR3678-201ENST00000578455 94 ntBASIC0.29□□□□□ -2.36
TRAF3IP2O43734 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.29□□□□□ -2.36
TRAF3IP2O43734 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
TRAF3IP2O43734 RNU6-403P-201ENST00000363163 104 ntBASIC0.28□□□□□ -2.36
TRAF3IP2O43734 RNA5SP517-201ENST00000364724 117 ntBASIC0.28□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.785-201ENST00000384290 109 ntBASIC0.28□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.470-201ENST00000384307 117 ntBASIC0.28□□□□□ -2.36
TRAF3IP2O43734 MIR518A1-201ENST00000385068 85 ntBASIC0.28□□□□□ -2.36
TRAF3IP2O43734 snosnR66.1-201ENST00000391095 99 ntBASIC0.28□□□□□ -2.36
TRAF3IP2O43734 SNORA68.3-201ENST00000515906 83 ntBASIC0.28□□□□□ -2.36
TRAF3IP2O43734 RNU6-138P-201ENST00000515952 107 ntBASIC0.28□□□□□ -2.36
TRAF3IP2O43734 RNU6-863P-201ENST00000515989 104 ntBASIC0.28□□□□□ -2.36
TRAF3IP2O43734 RNU2-60P-201ENST00000517290 128 ntBASIC0.28□□□□□ -2.36
TRAF3IP2O43734 MIR4305-201ENST00000583252 102 ntBASIC0.28□□□□□ -2.36
TRAF3IP2O43734 AC078938.1-201ENST00000620993 318 ntBASIC0.28□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.29-201ENST00000362570 113 ntBASIC0.27□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.531-201ENST00000384589 121 ntBASIC0.27□□□□□ -2.37
TRAF3IP2O43734 AL512326.2-201ENST00000426359 151 ntBASIC0.27□□□□□ -2.37
TRAF3IP2O43734 RNA5SP33-201ENST00000516687 98 ntBASIC0.27□□□□□ -2.37
TRAF3IP2O43734 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.27□□□□□ -2.37
TRAF3IP2O43734 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAF3IP2O43734 AC098479.1-201ENST00000609225 154 ntBASIC0.27□□□□□ -2.37
TRAF3IP2O43734 RNA5SP257-201ENST00000363023 116 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 SNORD118-201ENST00000363593 134 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 RNU6-682P-201ENST00000363843 106 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.251-201ENST00000364551 99 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.299-201ENST00000364973 94 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 SNORA8.2-201ENST00000384372 139 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 SNORA72.6-201ENST00000384520 129 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.536-201ENST00000384621 113 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.584-201ENST00000391090 114 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 AL603914.1-201ENST00000401964 204 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 RNU6-588P-201ENST00000410281 105 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.617-201ENST00000410920 90 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.662-201ENST00000516028 97 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 RNU6-388P-201ENST00000517012 105 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 RNU6-389P-201ENST00000517048 105 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 AC133485.4-201ENST00000561835 220 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 AC138907.4-201ENST00000570107 226 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 AC023932.2-201ENST00000603176 175 ntBASIC0.26□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.32-201ENST00000362589 110 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 SNORD114-10-201ENST00000363409 72 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.257-201ENST00000364596 102 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 RNU6-1327P-201ENST00000365302 105 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 SNORD18B-201ENST00000365659 72 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 RNU6-291P-201ENST00000384720 107 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.567-201ENST00000384736 106 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
TRAF3IP2O43734 RNU6-679P-201ENST00000391003 106 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 SNORD37.2-201ENST00000391075 66 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 RNU6-240P-201ENST00000516098 97 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 SNORA25.12-201ENST00000516202 82 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 RNU2-35P-201ENST00000516446 142 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 RNU6-861P-201ENST00000516745 106 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 SNORA81.3-201ENST00000517283 198 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 MIR4514-201ENST00000581410 57 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 MIR548AE2-201ENST00000583456 67 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 AC021443.1-201ENST00000604478 211 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms