Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RNU6-250P-201ENST00000516958 103 ntBASIC2.65□□□□□ -1.99
HOXA2O43364 MIR4287-201ENST00000579398 78 ntBASIC2.65□□□□□ -1.99
HOXA2O43364 MIR6840-201ENST00000611937 71 ntBASIC2.65□□□□□ -1.99
HOXA2O43364 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
HOXA2O43364 AC016717.2-201ENST00000609089 5141 ntBASIC2.64□□□□□ -1.99
HOXA2O43364 RNA5SP276-201ENST00000362580 94 ntBASIC2.64□□□□□ -1.99
HOXA2O43364 RNU6-686P-201ENST00000364839 107 ntBASIC2.64□□□□□ -1.99
HOXA2O43364 SNORA25.9-201ENST00000365087 128 ntBASIC2.64□□□□□ -1.99
HOXA2O43364 MIR17-201ENST00000385012 84 ntBASIC2.64□□□□□ -1.99
HOXA2O43364 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.64□□□□□ -1.99
HOXA2O43364 RNA5SP210-201ENST00000391034 120 ntBASIC2.64□□□□□ -1.99
HOXA2O43364 snoU13.26-201ENST00000459452 105 ntBASIC2.64□□□□□ -1.99
HOXA2O43364 RPL30P7-201ENST00000479312 323 ntBASIC2.64□□□□□ -1.99
HOXA2O43364 FGF7P7-201ENST00000514120 227 ntBASIC2.64□□□□□ -1.99
HOXA2O43364 Y_RNA.660-201ENST00000516002 120 ntBASIC2.64□□□□□ -1.99
HOXA2O43364 RNU6-947P-201ENST00000516264 106 ntBASIC2.64□□□□□ -1.99
HOXA2O43364 MIR5694-201ENST00000581190 76 ntBASIC2.64□□□□□ -1.99
HOXA2O43364 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXA2O43364 SNORA63.2-201ENST00000362603 126 ntBASIC2.63□□□□□ -1.99
HOXA2O43364 MIR144-201ENST00000384886 86 ntBASIC2.63□□□□□ -1.99
HOXA2O43364 RNU6-466P-201ENST00000391224 103 ntBASIC2.63□□□□□ -1.99
HOXA2O43364 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.63□□□□□ -1.99
HOXA2O43364 AC015688.6-201ENST00000577737 104 ntBASIC2.63□□□□□ -1.99
HOXA2O43364 MIR4648-201ENST00000580107 72 ntBASIC2.63□□□□□ -1.99
HOXA2O43364 MIR1291-201ENST00000627649 87 ntBASIC2.63□□□□□ -1.99
HOXA2O43364 MIR377-201ENST00000362145 69 ntBASIC2.62□□□□□ -1.99
HOXA2O43364 SNORD36A-201ENST00000362874 73 ntBASIC2.62□□□□□ -1.99
HOXA2O43364 RNU4-58P-201ENST00000363192 141 ntBASIC2.62□□□□□ -1.99
HOXA2O43364 MIR516A2-201ENST00000384888 90 ntBASIC2.62□□□□□ -1.99
HOXA2O43364 MIR516A1-201ENST00000385033 90 ntBASIC2.62□□□□□ -1.99
HOXA2O43364 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HOXA2O43364 RN7SKP223-201ENST00000410582 62 ntBASIC2.62□□□□□ -1.99
HOXA2O43364 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXA2O43364 RNU11-2P-201ENST00000516898 142 ntBASIC2.62□□□□□ -1.99
HOXA2O43364 MIR1273D-201ENST00000577266 86 ntBASIC2.62□□□□□ -1.99
HOXA2O43364 MIRLET7A1-201ENST00000362295 80 ntBASIC2.61□□□□□ -1.99
HOXA2O43364 Y_RNA.283-201ENST00000364798 112 ntBASIC2.61□□□□□ -1.99
HOXA2O43364 MIR504-201ENST00000385065 83 ntBASIC2.61□□□□□ -1.99
HOXA2O43364 AC005908.1-201ENST00000468701 347 ntBASIC2.61□□□□□ -1.99
HOXA2O43364 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXA2O43364 AL596028.1-201ENST00000326971 197 ntBASIC2.6□□□□□ -1.99
HOXA2O43364 MIR548U-201ENST00000390728 81 ntBASIC2.6□□□□□ -1.99
HOXA2O43364 AC245517.4-201ENST00000448601 281 ntBASIC2.6□□□□□ -1.99
HOXA2O43364 snoU13.15-201ENST00000459407 104 ntBASIC2.6□□□□□ -1.99
HOXA2O43364 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.6□□□□□ -1.99
HOXA2O43364 SNORD92-201ENST00000585078 85 ntBASIC2.6□□□□□ -1.99
HOXA2O43364 MIR6516-201ENST00000630554 81 ntBASIC2.6□□□□□ -1.99
HOXA2O43364 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXA2O43364 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HOXA2O43364 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXA2O43364 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HOXA2O43364 RNA5SP292-201ENST00000390974 118 ntBASIC2.59□□□□□ -1.99
HOXA2O43364 RNA5SP233-201ENST00000459153 113 ntBASIC2.59□□□□□ -1.99
HOXA2O43364 AL133373.1-201ENST00000497098 94 ntBASIC2.59□□□□□ -1.99
HOXA2O43364 AC026436.1-201ENST00000510537 270 ntBASIC2.59□□□□□ -1.99
HOXA2O43364 AC104996.3-201ENST00000590718 94 ntBASIC2.59□□□□□ -1.99
HOXA2O43364 AL161722.3-201ENST00000605789 2983 ntBASIC2.58□□□□□ -2
HOXA2O43364 MIR103A2-201ENST00000362154 78 ntBASIC2.58□□□□□ -2
HOXA2O43364 RNU6-161P-201ENST00000363051 106 ntBASIC2.58□□□□□ -2
HOXA2O43364 SNORD114-30-201ENST00000364448 72 ntBASIC2.58□□□□□ -2
HOXA2O43364 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.58□□□□□ -2
HOXA2O43364 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.58□□□□□ -2
HOXA2O43364 SNORA18.5-201ENST00000516616 101 ntBASIC2.58□□□□□ -2
HOXA2O43364 RNU6-531P-201ENST00000516694 104 ntBASIC2.58□□□□□ -2
HOXA2O43364 AC046143.2-201ENST00000609789 160 ntBASIC2.58□□□□□ -2
HOXA2O43364 AL773524.1-201ENST00000614065 229 ntBASIC2.58□□□□□ -2
HOXA2O43364 MIR6733-201ENST00000635723 61 ntBASIC2.58□□□□□ -2
HOXA2O43364 SNORD93-201ENST00000408813 74 ntBASIC2.57□□□□□ -2
HOXA2O43364 RNU6-1108P-201ENST00000516308 104 ntBASIC2.57□□□□□ -2
HOXA2O43364 MIR4491-201ENST00000581087 68 ntBASIC2.57□□□□□ -2
HOXA2O43364 uc_338.6-201ENST00000613544 171 ntBASIC2.57□□□□□ -2
HOXA2O43364 MIR8074-201ENST00000615081 81 ntBASIC2.57□□□□□ -2
HOXA2O43364 MIR7843-201ENST00000622274 79 ntBASIC2.57□□□□□ -2
HOXA2O43364 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
HOXA2O43364 AL356379.1-201ENST00000414105 126 ntBASIC2.56□□□□□ -2
HOXA2O43364 AC244636.1-201ENST00000421152 228 ntBASIC2.56□□□□□ -2
HOXA2O43364 MIR18B-201ENST00000454574 71 ntBASIC2.56□□□□□ -2
HOXA2O43364 snoU13.25-201ENST00000458945 104 ntBASIC2.56□□□□□ -2
HOXA2O43364 AC004223.1-201ENST00000479840 271 ntBASIC2.56□□□□□ -2
HOXA2O43364 AP003716.2-201ENST00000528260 108 ntBASIC2.56□□□□□ -2
HOXA2O43364 SNORA77B-201ENST00000578179 125 ntBASIC2.56□□□□□ -2
HOXA2O43364 MIR3064-201ENST00000581130 66 ntBASIC2.56□□□□□ -2
HOXA2O43364 RNA5SP432-201ENST00000362480 116 ntBASIC2.55□□□□□ -2
HOXA2O43364 RNA5SP264-201ENST00000363115 107 ntBASIC2.55□□□□□ -2
HOXA2O43364 Y_RNA.491-201ENST00000384417 107 ntBASIC2.55□□□□□ -2
HOXA2O43364 MIR1185-1-201ENST00000408598 86 ntBASIC2.55□□□□□ -2
HOXA2O43364 SNORD63B-201ENST00000411005 70 ntBASIC2.55□□□□□ -2
HOXA2O43364 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.55□□□□□ -2
HOXA2O43364 AC114801.3-201ENST00000510231 177 ntBASIC2.55□□□□□ -2
HOXA2O43364 RNU6-75P-201ENST00000515944 104 ntBASIC2.55□□□□□ -2
HOXA2O43364 SNORA25.16-201ENST00000516741 121 ntBASIC2.55□□□□□ -2
HOXA2O43364 MIR5007-201ENST00000583098 95 ntBASIC2.55□□□□□ -2
HOXA2O43364 AL627230.6-201ENST00000611129 280 ntBASIC2.55□□□□□ -2
HOXA2O43364 Y_RNA.788-201ENST00000622394 112 ntBASIC2.55□□□□□ -2
HOXA2O43364 MIR6873-201ENST00000622788 63 ntBASIC2.55□□□□□ -2
HOXA2O43364 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
HOXA2O43364 SNORD77.2-201ENST00000391045 68 ntBASIC2.54□□□□□ -2
HOXA2O43364 RNU6-807P-201ENST00000516805 107 ntBASIC2.54□□□□□ -2
HOXA2O43364 MIR4713-201ENST00000582691 75 ntBASIC2.54□□□□□ -2
HOXA2O43364 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms