Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RNA5SP144-201ENST00000410846 116 ntBASIC0.21□□□□□ -2.38
MSH4O15457 AL512326.2-201ENST00000426359 151 ntBASIC0.21□□□□□ -2.38
MSH4O15457 RNU7-113P-201ENST00000459273 62 ntBASIC0.21□□□□□ -2.38
MSH4O15457 RNU6-1219P-201ENST00000516143 112 ntBASIC0.21□□□□□ -2.38
MSH4O15457 SNORA31.14-201ENST00000516728 116 ntBASIC0.21□□□□□ -2.38
MSH4O15457 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.21□□□□□ -2.38
MSH4O15457 MIR4431-201ENST00000579990 94 ntBASIC0.21□□□□□ -2.38
MSH4O15457 MIR6718-201ENST00000616153 80 ntBASIC0.21□□□□□ -2.38
MSH4O15457 RNU6-349P-201ENST00000362402 107 ntBASIC0.2□□□□□ -2.38
MSH4O15457 RNU6-508P-201ENST00000363231 103 ntBASIC0.2□□□□□ -2.38
MSH4O15457 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
MSH4O15457 RNU6-588P-201ENST00000410281 105 ntBASIC0.2□□□□□ -2.38
MSH4O15457 RNU5E-9P-201ENST00000411164 104 ntBASIC0.2□□□□□ -2.38
MSH4O15457 SNRPGP12-201ENST00000449481 213 ntBASIC0.2□□□□□ -2.38
MSH4O15457 RNA5SP33-201ENST00000516687 98 ntBASIC0.2□□□□□ -2.38
MSH4O15457 Y_RNA.697-201ENST00000516776 113 ntBASIC0.2□□□□□ -2.38
MSH4O15457 DEFB131E-201ENST00000532329 154 ntBASIC0.2□□□□□ -2.38
MSH4O15457 AC130289.1-201ENST00000577321 73 ntBASIC0.2□□□□□ -2.38
MSH4O15457 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.2□□□□□ -2.38
MSH4O15457 AL353621.2-201ENST00000605340 133 ntBASIC0.2□□□□□ -2.38
MSH4O15457 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
MSH4O15457 RNA5SP62-201ENST00000363457 110 ntBASIC0.19□□□□□ -2.38
MSH4O15457 RNU6-1020P-201ENST00000363684 107 ntBASIC0.19□□□□□ -2.38
MSH4O15457 RNY1P11-201ENST00000363759 113 ntBASIC0.19□□□□□ -2.38
MSH4O15457 Y_RNA.274-201ENST00000364714 101 ntBASIC0.19□□□□□ -2.38
MSH4O15457 RNU6-690P-201ENST00000365242 106 ntBASIC0.19□□□□□ -2.38
MSH4O15457 Y_RNA.452-201ENST00000384202 108 ntBASIC0.19□□□□□ -2.38
MSH4O15457 RNU6-291P-201ENST00000384720 107 ntBASIC0.19□□□□□ -2.38
MSH4O15457 RNU6-535P-201ENST00000384722 107 ntBASIC0.19□□□□□ -2.38
MSH4O15457 RNU6-469P-201ENST00000516253 101 ntBASIC0.19□□□□□ -2.38
MSH4O15457 RNU6-531P-201ENST00000516694 104 ntBASIC0.19□□□□□ -2.38
MSH4O15457 Y_RNA.30-201ENST00000362572 97 ntBASIC0.18□□□□□ -2.38
MSH4O15457 RNA5SP133-201ENST00000363368 119 ntBASIC0.18□□□□□ -2.38
MSH4O15457 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
MSH4O15457 RNA5SP245-201ENST00000364239 121 ntBASIC0.18□□□□□ -2.38
MSH4O15457 RNU6-818P-201ENST00000364837 108 ntBASIC0.18□□□□□ -2.38
MSH4O15457 Y_RNA.435-201ENST00000384095 112 ntBASIC0.18□□□□□ -2.38
MSH4O15457 Y_RNA.515-201ENST00000384535 112 ntBASIC0.18□□□□□ -2.38
MSH4O15457 Y_RNA.536-201ENST00000384621 113 ntBASIC0.18□□□□□ -2.38
MSH4O15457 Y_RNA.793-201ENST00000411222 111 ntBASIC0.18□□□□□ -2.38
MSH4O15457 AL022718.1-201ENST00000412004 84 ntBASIC0.18□□□□□ -2.38
MSH4O15457 SUMO1P3-201ENST00000439961 304 ntBASIC0.18□□□□□ -2.38
MSH4O15457 RNU6-240P-201ENST00000516098 97 ntBASIC0.18□□□□□ -2.38
MSH4O15457 RNA5SP236-201ENST00000516169 116 ntBASIC0.18□□□□□ -2.38
MSH4O15457 RNU2-35P-201ENST00000516446 142 ntBASIC0.18□□□□□ -2.38
MSH4O15457 AP003327.1-201ENST00000529684 127 ntBASIC0.18□□□□□ -2.38
MSH4O15457 AC105081.1-201ENST00000617727 106 ntBASIC0.18□□□□□ -2.38
MSH4O15457 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.18□□□□□ -2.38
MSH4O15457 AC078938.1-201ENST00000620993 318 ntBASIC0.18□□□□□ -2.38
MSH4O15457 MIR3658-201ENST00000636291 56 ntBASIC0.18□□□□□ -2.38
MSH4O15457 MIR6844-201ENST00000637122 62 ntBASIC0.18□□□□□ -2.38
MSH4O15457 Y_RNA.120-201ENST00000363304 110 ntBASIC0.17□□□□□ -2.38
MSH4O15457 Y_RNA.233-201ENST00000364407 101 ntBASIC0.17□□□□□ -2.38
MSH4O15457 RNU6-463P-201ENST00000384340 107 ntBASIC0.17□□□□□ -2.38
MSH4O15457 Y_RNA.497-201ENST00000384447 98 ntBASIC0.17□□□□□ -2.38
MSH4O15457 AC069271.1-201ENST00000445577 156 ntBASIC0.17□□□□□ -2.38
MSH4O15457 RNU6-893P-201ENST00000458841 100 ntBASIC0.17□□□□□ -2.38
MSH4O15457 AC107027.2-201ENST00000512197 115 ntBASIC0.17□□□□□ -2.38
MSH4O15457 RNU6-1194P-201ENST00000516208 104 ntBASIC0.17□□□□□ -2.38
MSH4O15457 RNA5SP268-201ENST00000516828 124 ntBASIC0.17□□□□□ -2.38
MSH4O15457 RNU6-765P-201ENST00000516916 99 ntBASIC0.17□□□□□ -2.38
MSH4O15457 RNU7-35P-201ENST00000517174 62 ntBASIC0.17□□□□□ -2.38
MSH4O15457 MIR548AE2-201ENST00000583456 67 ntBASIC0.17□□□□□ -2.38
MSH4O15457 AC009779.6-201ENST00000603972 165 ntBASIC0.17□□□□□ -2.38
MSH4O15457 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.17□□□□□ -2.38
MSH4O15457 U6.109-201ENST00000636749 87 ntBASIC0.17□□□□□ -2.38
MSH4O15457 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.17□□□□□ -2.38
MSH4O15457 SNORA63.5-201ENST00000363548 123 ntBASIC0.16□□□□□ -2.38
MSH4O15457 Y_RNA.337-201ENST00000365312 102 ntBASIC0.16□□□□□ -2.38
MSH4O15457 RNU6-815P-201ENST00000384080 113 ntBASIC0.16□□□□□ -2.38
MSH4O15457 SNORD67.1-201ENST00000516618 108 ntBASIC0.16□□□□□ -2.38
MSH4O15457 RNU2-60P-201ENST00000517290 128 ntBASIC0.16□□□□□ -2.38
MSH4O15457 AL359881.1-201ENST00000602916 267 ntBASIC0.16□□□□□ -2.38
MSH4O15457 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.15□□□□□ -2.38
MSH4O15457 SNORD115-2-201ENST00000362842 82 ntBASIC0.15□□□□□ -2.39
MSH4O15457 Y_RNA.144-201ENST00000363521 113 ntBASIC0.15□□□□□ -2.39
MSH4O15457 RNU6-312P-201ENST00000364629 107 ntBASIC0.15□□□□□ -2.39
MSH4O15457 Y_RNA.297-201ENST00000364950 91 ntBASIC0.15□□□□□ -2.39
MSH4O15457 SNORD115-20-201ENST00000365099 82 ntBASIC0.15□□□□□ -2.39
MSH4O15457 Y_RNA.366-201ENST00000365540 102 ntBASIC0.15□□□□□ -2.39
MSH4O15457 Y_RNA.476-201ENST00000384347 108 ntBASIC0.15□□□□□ -2.39
MSH4O15457 Y_RNA.531-201ENST00000384589 121 ntBASIC0.15□□□□□ -2.39
MSH4O15457 RNA5SP63-201ENST00000391225 112 ntBASIC0.15□□□□□ -2.39
MSH4O15457 AC073261.1-201ENST00000429409 121 ntBASIC0.15□□□□□ -2.39
MSH4O15457 RNU6-863P-201ENST00000515989 104 ntBASIC0.15□□□□□ -2.39
MSH4O15457 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.15□□□□□ -2.39
MSH4O15457 MIR4305-201ENST00000583252 102 ntBASIC0.15□□□□□ -2.39
MSH4O15457 AC021443.1-201ENST00000604478 211 ntBASIC0.15□□□□□ -2.39
MSH4O15457 MIR7107-201ENST00000611489 80 ntBASIC0.15□□□□□ -2.39
MSH4O15457 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.15□□□□□ -2.39
MSH4O15457 AC141273.2-201ENST00000618989 130 ntBASIC0.15□□□□□ -2.39
MSH4O15457 Y_RNA.174-201ENST00000363781 105 ntBASIC0.14□□□□□ -2.39
MSH4O15457 RNU6-309P-201ENST00000364573 106 ntBASIC0.14□□□□□ -2.39
MSH4O15457 Y_RNA.357-201ENST00000365487 109 ntBASIC0.14□□□□□ -2.39
MSH4O15457 Y_RNA.423-201ENST00000384057 113 ntBASIC0.14□□□□□ -2.39
MSH4O15457 RNU6-187P-201ENST00000384139 106 ntBASIC0.14□□□□□ -2.39
MSH4O15457 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
MSH4O15457 SNORD37.2-201ENST00000391075 66 ntBASIC0.14□□□□□ -2.39
MSH4O15457 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
MSH4O15457 SNORA75.5-201ENST00000391291 81 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms