Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.61□□□□□ -2.15
TRIM38O00635 RNU6-1313P-201ENST00000362622 102 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 SNORA32-201ENST00000384072 121 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 RNU6-242P-201ENST00000384359 107 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 SNORD116-22-201ENST00000384430 92 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 SNORD28B-201ENST00000390993 75 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 RNU6-1307P-201ENST00000391012 103 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 Y_RNA.620-201ENST00000411009 88 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 RNU7-171P-201ENST00000459581 62 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 UBL5P1-201ENST00000507979 193 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 RNU6-1018P-201ENST00000516577 106 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 Y_RNA.705-201ENST00000516862 110 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 RNU6-958P-201ENST00000516995 106 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 AL512310.8-201ENST00000550183 120 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 AL645939.4-201ENST00000604495 135 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 MIR4791-201ENST00000607666 84 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 AL512598.1-201ENST00000610158 273 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 MIR376B-201ENST00000614515 100 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.61□□□□□ -2.15
TRIM38O00635 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.61□□□□□ -2.15
TRIM38O00635 Y_RNA.370-201ENST00000365589 108 ntBASIC1.6□□□□□ -2.15
TRIM38O00635 SNORA24-201ENST00000384096 131 ntBASIC1.6□□□□□ -2.15
TRIM38O00635 MIR526A1-201ENST00000384897 85 ntBASIC1.6□□□□□ -2.15
TRIM38O00635 RNU6-279P-201ENST00000391297 101 ntBASIC1.6□□□□□ -2.15
TRIM38O00635 RNU6-1006P-201ENST00000516998 103 ntBASIC1.6□□□□□ -2.15
TRIM38O00635 MIR4666B-201ENST00000578142 81 ntBASIC1.6□□□□□ -2.15
TRIM38O00635 MIR4668-201ENST00000582284 70 ntBASIC1.6□□□□□ -2.15
TRIM38O00635 AL020996.3-201ENST00000606617 222 ntBASIC1.6□□□□□ -2.15
TRIM38O00635 GHRLOS.1-201ENST00000610995 70 ntBASIC1.6□□□□□ -2.15
TRIM38O00635 MIR6717-201ENST00000622747 73 ntBASIC1.6□□□□□ -2.15
TRIM38O00635 RNU1-42P-201ENST00000364033 160 ntBASIC1.59□□□□□ -2.15
TRIM38O00635 SNORA1.1-201ENST00000364671 133 ntBASIC1.59□□□□□ -2.15
TRIM38O00635 U8.15-201ENST00000390947 134 ntBASIC1.59□□□□□ -2.15
TRIM38O00635 SNORD77B-201ENST00000391112 67 ntBASIC1.59□□□□□ -2.15
TRIM38O00635 AC090844.1-201ENST00000422019 156 ntBASIC1.59□□□□□ -2.15
TRIM38O00635 HMGN1P33-201ENST00000432945 451 ntBASIC1.59□□□□□ -2.15
TRIM38O00635 RPS29P29-201ENST00000456396 171 ntBASIC1.59□□□□□ -2.15
TRIM38O00635 RNU6-65P-201ENST00000516332 98 ntBASIC1.59□□□□□ -2.15
TRIM38O00635 MIR3664-201ENST00000579074 99 ntBASIC1.59□□□□□ -2.15
TRIM38O00635 MIR548AR-201ENST00000582191 57 ntBASIC1.59□□□□□ -2.15
TRIM38O00635 MIR8070-201ENST00000616510 88 ntBASIC1.59□□□□□ -2.15
TRIM38O00635 SEPT14P17-201ENST00000617978 177 ntBASIC1.59□□□□□ -2.15
TRIM38O00635 SNORD58A-201ENST00000383875 65 ntBASIC1.58□□□□□ -2.16
TRIM38O00635 Y_RNA.430-201ENST00000384081 110 ntBASIC1.58□□□□□ -2.16
TRIM38O00635 Y_RNA.437-201ENST00000384113 113 ntBASIC1.58□□□□□ -2.16
TRIM38O00635 RNY1P4-201ENST00000384595 115 ntBASIC1.58□□□□□ -2.16
TRIM38O00635 MIR136-201ENST00000385207 82 ntBASIC1.58□□□□□ -2.16
TRIM38O00635 SNORD41-201ENST00000386967 70 ntBASIC1.58□□□□□ -2.16
TRIM38O00635 RNU7-67P-201ENST00000459003 62 ntBASIC1.58□□□□□ -2.16
TRIM38O00635 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.58□□□□□ -2.16
TRIM38O00635 RNU6-857P-201ENST00000515893 110 ntBASIC1.58□□□□□ -2.16
TRIM38O00635 RNU6-922P-201ENST00000516753 99 ntBASIC1.58□□□□□ -2.16
TRIM38O00635 SNORD53B-201ENST00000577887 78 ntBASIC1.58□□□□□ -2.16
TRIM38O00635 AC006160.2-201ENST00000637708 154 ntBASIC1.58□□□□□ -2.16
TRIM38O00635 AL512310.12-203ENST00000640543 90 ntBASIC1.58□□□□□ -2.16
TRIM38O00635 Y_RNA.191-201ENST00000363972 113 ntBASIC1.57□□□□□ -2.16
TRIM38O00635 RNU6-1163P-201ENST00000364516 107 ntBASIC1.57□□□□□ -2.16
TRIM38O00635 SNORA1.2-201ENST00000365189 134 ntBASIC1.57□□□□□ -2.16
TRIM38O00635 RNU6-342P-201ENST00000384521 104 ntBASIC1.57□□□□□ -2.16
TRIM38O00635 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
TRIM38O00635 RNU7-73P-201ENST00000458743 63 ntBASIC1.57□□□□□ -2.16
TRIM38O00635 SNORD123-201ENST00000459473 70 ntBASIC1.57□□□□□ -2.16
TRIM38O00635 RNU7-53P-201ENST00000516705 60 ntBASIC1.57□□□□□ -2.16
TRIM38O00635 MIR3152-201ENST00000579801 74 ntBASIC1.57□□□□□ -2.16
TRIM38O00635 BX248123.2-201ENST00000606318 124 ntBASIC1.57□□□□□ -2.16
TRIM38O00635 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRIM38O00635 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRIM38O00635 Y_RNA.96-201ENST00000363092 109 ntBASIC1.56□□□□□ -2.16
TRIM38O00635 SNORD116-10-201ENST00000363791 102 ntBASIC1.56□□□□□ -2.16
TRIM38O00635 RNU7-2P-201ENST00000516096 62 ntBASIC1.56□□□□□ -2.16
TRIM38O00635 FAM106DP-201ENST00000586416 501 ntBASIC1.56□□□□□ -2.16
TRIM38O00635 RNU6-86P-201ENST00000606534 107 ntBASIC1.56□□□□□ -2.16
TRIM38O00635 AC103810.7-201ENST00000607821 91 ntBASIC1.56□□□□□ -2.16
TRIM38O00635 AC243994.1-201ENST00000618627 109 ntBASIC1.56□□□□□ -2.16
TRIM38O00635 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.56□□□□□ -2.16
TRIM38O00635 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRIM38O00635 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM38O00635 SNORA70.7-201ENST00000384159 133 ntBASIC1.55□□□□□ -2.16
TRIM38O00635 MIR34C-201ENST00000384831 77 ntBASIC1.55□□□□□ -2.16
TRIM38O00635 MIR206-201ENST00000384872 86 ntBASIC1.55□□□□□ -2.16
TRIM38O00635 MIR4439-201ENST00000583746 80 ntBASIC1.55□□□□□ -2.16
TRIM38O00635 AC096720.1-201ENST00000604441 183 ntBASIC1.55□□□□□ -2.16
TRIM38O00635 AC020891.4-201ENST00000605745 93 ntBASIC1.55□□□□□ -2.16
TRIM38O00635 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
TRIM38O00635 MIR548BB-201ENST00000626714 66 ntBASIC1.55□□□□□ -2.16
TRIM38O00635 MIR499A-201ENST00000384903 122 ntBASIC1.54□□□□□ -2.16
TRIM38O00635 Y_RNA.611-201ENST00000410682 108 ntBASIC1.54□□□□□ -2.16
TRIM38O00635 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.54□□□□□ -2.16
TRIM38O00635 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.54□□□□□ -2.16
TRIM38O00635 AC009474.2-201ENST00000451383 136 ntBASIC1.54□□□□□ -2.16
TRIM38O00635 RN7SKP88-201ENST00000516847 250 ntBASIC1.54□□□□□ -2.16
TRIM38O00635 MIR8055-201ENST00000610739 97 ntBASIC1.54□□□□□ -2.16
TRIM38O00635 7SK.8-201ENST00000612110 250 ntBASIC1.54□□□□□ -2.16
TRIM38O00635 7SK.11-201ENST00000615477 250 ntBASIC1.54□□□□□ -2.16
TRIM38O00635 MIR7111-201ENST00000619751 72 ntBASIC1.54□□□□□ -2.16
TRIM38O00635 7SK.13-201ENST00000622040 250 ntBASIC1.54□□□□□ -2.16
TRIM38O00635 RNU6-509P-201ENST00000363519 107 ntBASIC1.53□□□□□ -2.16
TRIM38O00635 SNORD115-27-201ENST00000364430 82 ntBASIC1.53□□□□□ -2.16
TRIM38O00635 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
TRIM38O00635 RNU6-1296P-201ENST00000383879 107 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 241.8 ms