Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AL450471.1-201ENST00000447509 127 ntBASIC2.02□□□□□ -2.09
RFXAPO00287 RPS29P11-201ENST00000496507 171 ntBASIC2.02□□□□□ -2.09
RFXAPO00287 CYP3A52P-201ENST00000563326 91 ntBASIC2.02□□□□□ -2.09
RFXAPO00287 AC141846.1-201ENST00000568348 142 ntBASIC2.02□□□□□ -2.09
RFXAPO00287 SNORA4-201ENST00000584302 138 ntBASIC2.02□□□□□ -2.09
RFXAPO00287 AP001362.1-201ENST00000625165 124 ntBASIC2.02□□□□□ -2.09
RFXAPO00287 AP000553.5-201ENST00000641933 54 ntBASIC2.02□□□□□ -2.09
RFXAPO00287 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RFXAPO00287 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
RFXAPO00287 RNA5SP465-201ENST00000391195 109 ntBASIC2.01□□□□□ -2.09
RFXAPO00287 AC005908.1-201ENST00000468701 347 ntBASIC2.01□□□□□ -2.09
RFXAPO00287 RNU6-250P-201ENST00000516958 103 ntBASIC2.01□□□□□ -2.09
RFXAPO00287 AC090897.1-201ENST00000580909 226 ntBASIC2.01□□□□□ -2.09
RFXAPO00287 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.01□□□□□ -2.09
RFXAPO00287 RNU4-32P-201ENST00000363404 141 ntBASIC2□□□□□ -2.09
RFXAPO00287 RNA5SP37-201ENST00000365420 130 ntBASIC2□□□□□ -2.09
RFXAPO00287 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
RFXAPO00287 RNA5SP100-201ENST00000410903 110 ntBASIC2□□□□□ -2.09
RFXAPO00287 RNA5SP59-201ENST00000410922 110 ntBASIC2□□□□□ -2.09
RFXAPO00287 AC027119.1-201ENST00000440877 241 ntBASIC2□□□□□ -2.09
RFXAPO00287 RNU7-85P-201ENST00000458851 63 ntBASIC2□□□□□ -2.09
RFXAPO00287 RNU7-95P-201ENST00000459222 64 ntBASIC2□□□□□ -2.09
RFXAPO00287 AC079804.2-201ENST00000490376 200 ntBASIC2□□□□□ -2.09
RFXAPO00287 SNORA31.17-201ENST00000516953 127 ntBASIC2□□□□□ -2.09
RFXAPO00287 5S_rRNA.3-201ENST00000517021 110 ntBASIC2□□□□□ -2.09
RFXAPO00287 SNORD14A-201ENST00000606526 91 ntBASIC2□□□□□ -2.09
RFXAPO00287 5S_rRNA.19-201ENST00000612131 110 ntBASIC2□□□□□ -2.09
RFXAPO00287 5S_rRNA.18-201ENST00000621941 110 ntBASIC2□□□□□ -2.09
RFXAPO00287 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
RFXAPO00287 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
RFXAPO00287 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RFXAPO00287 RNA5SP160-201ENST00000364866 120 ntBASIC1.99□□□□□ -2.09
RFXAPO00287 MIR520C-201ENST00000385005 87 ntBASIC1.99□□□□□ -2.09
RFXAPO00287 RNU6-519P-201ENST00000410590 108 ntBASIC1.99□□□□□ -2.09
RFXAPO00287 RNU7-43P-201ENST00000516554 64 ntBASIC1.99□□□□□ -2.09
RFXAPO00287 AC145423.2-201ENST00000610631 239 ntBASIC1.99□□□□□ -2.09
RFXAPO00287 MIR4251-201ENST00000635819 61 ntBASIC1.99□□□□□ -2.09
RFXAPO00287 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
RFXAPO00287 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
RFXAPO00287 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RFXAPO00287 HSBP1P2-201ENST00000299671 229 ntBASIC1.98□□□□□ -2.09
RFXAPO00287 AL596028.1-201ENST00000326971 197 ntBASIC1.98□□□□□ -2.09
RFXAPO00287 Y_RNA.57-201ENST00000362806 113 ntBASIC1.98□□□□□ -2.09
RFXAPO00287 Y_RNA.98-201ENST00000363109 102 ntBASIC1.98□□□□□ -2.09
RFXAPO00287 AC009474.2-201ENST00000451383 136 ntBASIC1.98□□□□□ -2.09
RFXAPO00287 SNORA25.13-201ENST00000516395 103 ntBASIC1.98□□□□□ -2.09
RFXAPO00287 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
RFXAPO00287 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
RFXAPO00287 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RFXAPO00287 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
RFXAPO00287 Y_RNA.168-201ENST00000363740 102 ntBASIC1.97□□□□□ -2.09
RFXAPO00287 Y_RNA.354-201ENST00000365448 111 ntBASIC1.97□□□□□ -2.09
RFXAPO00287 MIR1276-201ENST00000408707 83 ntBASIC1.97□□□□□ -2.09
RFXAPO00287 AC244023.1-201ENST00000426884 112 ntBASIC1.97□□□□□ -2.09
RFXAPO00287 SNORD4B-201ENST00000459083 72 ntBASIC1.97□□□□□ -2.09
RFXAPO00287 RNU6-523P-201ENST00000516304 54 ntBASIC1.97□□□□□ -2.09
RFXAPO00287 AC138749.4-201ENST00000563970 127 ntBASIC1.97□□□□□ -2.09
RFXAPO00287 AC242498.1-201ENST00000604134 111 ntBASIC1.97□□□□□ -2.09
RFXAPO00287 AL662814.1-201ENST00000617364 121 ntBASIC1.97□□□□□ -2.09
RFXAPO00287 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
RFXAPO00287 AL161722.3-201ENST00000605789 2983 ntBASIC1.97□□□□□ -2.09
RFXAPO00287 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RFXAPO00287 RNU6-1067P-201ENST00000384752 107 ntBASIC1.96□□□□□ -2.1
RFXAPO00287 RNU6-788P-201ENST00000390967 104 ntBASIC1.96□□□□□ -2.1
RFXAPO00287 HMGN2P38-201ENST00000423806 265 ntBASIC1.96□□□□□ -2.1
RFXAPO00287 RPS27P21-201ENST00000486977 252 ntBASIC1.96□□□□□ -2.1
RFXAPO00287 MIR6840-201ENST00000611937 71 ntBASIC1.96□□□□□ -2.1
RFXAPO00287 uc_338.6-201ENST00000613544 171 ntBASIC1.96□□□□□ -2.1
RFXAPO00287 SNORD115-37-201ENST00000363768 82 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 SNORD38.2-201ENST00000384470 69 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RFXAPO00287 RNU6-129P-201ENST00000391022 107 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 RNU6-447P-201ENST00000410293 104 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 RNU6-1118P-201ENST00000410382 104 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 RNU6-1076P-201ENST00000410397 104 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 RNU6-355P-201ENST00000410427 104 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 RNU6-791P-201ENST00000410467 104 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 RNU6-705P-201ENST00000410601 104 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 RNU6-1100P-201ENST00000410691 104 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 RNU6-860P-201ENST00000410860 104 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 RNA5SP450-201ENST00000411206 102 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 RNU6-1217P-201ENST00000411276 104 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 RNU6-785P-201ENST00000411324 104 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 SNRPGP12-201ENST00000449481 213 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 SCARNA18B-201ENST00000458806 135 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 RNA5SP481-201ENST00000516814 122 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 U6.90-201ENST00000614007 104 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 AL449363.1-201ENST00000617815 186 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 U6.70-201ENST00000620287 104 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RFXAPO00287 WWP1P1-201ENST00000466609 2769 ntBASIC1.95□□□□□ -2.1
RFXAPO00287 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RFXAPO00287 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RFXAPO00287 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RFXAPO00287 SNORA38-201ENST00000363946 132 ntBASIC1.94□□□□□ -2.1
RFXAPO00287 Y_RNA.327-201ENST00000365201 102 ntBASIC1.94□□□□□ -2.1
RFXAPO00287 RNU6-480P-201ENST00000384332 107 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms