Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RNA5SP63-201ENST00000391225 112 ntBASIC0.16□□□□□ -2.38
NPIPA2E9PIF3 SNORD58.1-201ENST00000391313 66 ntBASIC0.16□□□□□ -2.38
NPIPA2E9PIF3 AC069271.1-201ENST00000445577 156 ntBASIC0.16□□□□□ -2.38
NPIPA2E9PIF3 RNA5SP33-201ENST00000516687 98 ntBASIC0.16□□□□□ -2.38
NPIPA2E9PIF3 RNU6-531P-201ENST00000516694 104 ntBASIC0.16□□□□□ -2.38
NPIPA2E9PIF3 AC062037.2-201ENST00000610137 73 ntBASIC0.16□□□□□ -2.38
NPIPA2E9PIF3 Y_RNA.60-201ENST00000362831 98 ntBASIC0.15□□□□□ -2.39
NPIPA2E9PIF3 RNU6-1229P-201ENST00000364295 107 ntBASIC0.15□□□□□ -2.39
NPIPA2E9PIF3 RNU2-59P-201ENST00000410482 191 ntBASIC0.15□□□□□ -2.39
NPIPA2E9PIF3 AL022718.1-201ENST00000412004 84 ntBASIC0.15□□□□□ -2.39
NPIPA2E9PIF3 RNU6-135P-201ENST00000516769 101 ntBASIC0.15□□□□□ -2.39
NPIPA2E9PIF3 RNU6-111P-201ENST00000517179 105 ntBASIC0.15□□□□□ -2.39
NPIPA2E9PIF3 MIR4431-201ENST00000579990 94 ntBASIC0.15□□□□□ -2.39
NPIPA2E9PIF3 MIR7107-201ENST00000611489 80 ntBASIC0.15□□□□□ -2.39
NPIPA2E9PIF3 MIR6718-201ENST00000616153 80 ntBASIC0.15□□□□□ -2.39
NPIPA2E9PIF3 MIR2909-201ENST00000617113 69 ntBASIC0.15□□□□□ -2.39
NPIPA2E9PIF3 Y_RNA.75-201ENST00000362927 97 ntBASIC0.14□□□□□ -2.39
NPIPA2E9PIF3 RNU6-1099P-201ENST00000363533 107 ntBASIC0.14□□□□□ -2.39
NPIPA2E9PIF3 SNORA20.1-201ENST00000364790 130 ntBASIC0.14□□□□□ -2.39
NPIPA2E9PIF3 Y_RNA.374-201ENST00000365606 101 ntBASIC0.14□□□□□ -2.39
NPIPA2E9PIF3 Y_RNA.478-201ENST00000384358 107 ntBASIC0.14□□□□□ -2.39
NPIPA2E9PIF3 RNU6-768P-201ENST00000384683 107 ntBASIC0.14□□□□□ -2.39
NPIPA2E9PIF3 RNU6-918P-201ENST00000391219 106 ntBASIC0.14□□□□□ -2.39
NPIPA2E9PIF3 RNA5SP227-201ENST00000516184 113 ntBASIC0.14□□□□□ -2.39
NPIPA2E9PIF3 RNU6-1194P-201ENST00000516208 104 ntBASIC0.14□□□□□ -2.39
NPIPA2E9PIF3 RNU4-71P-201ENST00000516258 113 ntBASIC0.14□□□□□ -2.39
NPIPA2E9PIF3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.14□□□□□ -2.39
NPIPA2E9PIF3 RNA5SP133-201ENST00000363368 119 ntBASIC0.13□□□□□ -2.39
NPIPA2E9PIF3 Y_RNA.162-201ENST00000363683 102 ntBASIC0.13□□□□□ -2.39
NPIPA2E9PIF3 RNA5SP245-201ENST00000364239 121 ntBASIC0.13□□□□□ -2.39
NPIPA2E9PIF3 RNU6-1082P-201ENST00000364574 107 ntBASIC0.13□□□□□ -2.39
NPIPA2E9PIF3 RNU6-47P-201ENST00000383866 107 ntBASIC0.13□□□□□ -2.39
NPIPA2E9PIF3 SCARNA15.1-201ENST00000516384 125 ntBASIC0.13□□□□□ -2.39
NPIPA2E9PIF3 RNU7-35P-201ENST00000517174 62 ntBASIC0.13□□□□□ -2.39
NPIPA2E9PIF3 AC069113.3-201ENST00000521019 150 ntBASIC0.13□□□□□ -2.39
NPIPA2E9PIF3 AC112693.2-201ENST00000556538 232 ntBASIC0.13□□□□□ -2.39
NPIPA2E9PIF3 U6.109-201ENST00000636749 87 ntBASIC0.13□□□□□ -2.39
NPIPA2E9PIF3 RNA5SP257-201ENST00000363023 116 ntBASIC0.12□□□□□ -2.39
NPIPA2E9PIF3 Y_RNA.120-201ENST00000363304 110 ntBASIC0.12□□□□□ -2.39
NPIPA2E9PIF3 RNU6-690P-201ENST00000365242 106 ntBASIC0.12□□□□□ -2.39
NPIPA2E9PIF3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.12□□□□□ -2.39
NPIPA2E9PIF3 SNORD28-201ENST00000384706 75 ntBASIC0.12□□□□□ -2.39
NPIPA2E9PIF3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.12□□□□□ -2.39
NPIPA2E9PIF3 RNA5SP47-201ENST00000517230 109 ntBASIC0.12□□□□□ -2.39
NPIPA2E9PIF3 U4.1-201ENST00000620349 87 ntBASIC0.12□□□□□ -2.39
NPIPA2E9PIF3 RNU6-187P-201ENST00000384139 106 ntBASIC0.11□□□□□ -2.39
NPIPA2E9PIF3 Y_RNA.447-201ENST00000384184 113 ntBASIC0.11□□□□□ -2.39
NPIPA2E9PIF3 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
NPIPA2E9PIF3 RNU6-1023P-201ENST00000516137 106 ntBASIC0.11□□□□□ -2.39
NPIPA2E9PIF3 RNA5SP236-201ENST00000516169 116 ntBASIC0.11□□□□□ -2.39
NPIPA2E9PIF3 RNU6-1045P-201ENST00000516321 107 ntBASIC0.11□□□□□ -2.39
NPIPA2E9PIF3 AC244669.1-204ENST00000621564 178 ntBASIC0.11□□□□□ -2.39
NPIPA2E9PIF3 MIR4315-1-201ENST00000636800 73 ntBASIC0.11□□□□□ -2.39
NPIPA2E9PIF3 MIR4315-2-201ENST00000640925 73 ntBASIC0.11□□□□□ -2.39
NPIPA2E9PIF3 SNORD115-2-201ENST00000362842 82 ntBASIC0.1□□□□□ -2.39
NPIPA2E9PIF3 RNU4-58P-201ENST00000363192 141 ntBASIC0.1□□□□□ -2.39
NPIPA2E9PIF3 SNORA63.5-201ENST00000363548 123 ntBASIC0.1□□□□□ -2.39
NPIPA2E9PIF3 SNORD115-20-201ENST00000365099 82 ntBASIC0.1□□□□□ -2.39
NPIPA2E9PIF3 Y_RNA.476-201ENST00000384347 108 ntBASIC0.1□□□□□ -2.39
NPIPA2E9PIF3 SNORD67.1-201ENST00000516618 108 ntBASIC0.1□□□□□ -2.39
NPIPA2E9PIF3 MIR548AE2-201ENST00000583456 67 ntBASIC0.1□□□□□ -2.39
NPIPA2E9PIF3 AC105081.1-201ENST00000617727 106 ntBASIC0.1□□□□□ -2.39
NPIPA2E9PIF3 MIR6828-201ENST00000636181 60 ntBASIC0.1□□□□□ -2.39
NPIPA2E9PIF3 AC091304.10-201ENST00000641554 121 ntBASIC0.1□□□□□ -2.39
NPIPA2E9PIF3 MIR101-2-201ENST00000362195 79 ntBASIC0.09□□□□□ -2.4
NPIPA2E9PIF3 MIR411-201ENST00000362239 96 ntBASIC0.09□□□□□ -2.4
NPIPA2E9PIF3 Y_RNA.83-201ENST00000363005 113 ntBASIC0.09□□□□□ -2.4
NPIPA2E9PIF3 RNU6-818P-201ENST00000364837 108 ntBASIC0.09□□□□□ -2.4
NPIPA2E9PIF3 Y_RNA.307-201ENST00000365022 117 ntBASIC0.09□□□□□ -2.4
NPIPA2E9PIF3 RNU6-574P-201ENST00000384265 107 ntBASIC0.09□□□□□ -2.4
NPIPA2E9PIF3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
NPIPA2E9PIF3 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
NPIPA2E9PIF3 RNU6-240P-201ENST00000516098 97 ntBASIC0.09□□□□□ -2.4
NPIPA2E9PIF3 RNU2-35P-201ENST00000516446 142 ntBASIC0.09□□□□□ -2.4
NPIPA2E9PIF3 MIR4503-201ENST00000582187 83 ntBASIC0.09□□□□□ -2.4
NPIPA2E9PIF3 MIR4305-201ENST00000583252 102 ntBASIC0.09□□□□□ -2.4
NPIPA2E9PIF3 MIR4639-201ENST00000584938 69 ntBASIC0.09□□□□□ -2.4
NPIPA2E9PIF3 MIR6755-201ENST00000619993 66 ntBASIC0.09□□□□□ -2.4
NPIPA2E9PIF3 Y_RNA.49-201ENST00000362714 112 ntBASIC0.08□□□□□ -2.4
NPIPA2E9PIF3 Y_RNA.200-201ENST00000364018 102 ntBASIC0.08□□□□□ -2.4
NPIPA2E9PIF3 Y_RNA.251-201ENST00000364551 99 ntBASIC0.08□□□□□ -2.4
NPIPA2E9PIF3 Y_RNA.366-201ENST00000365540 102 ntBASIC0.08□□□□□ -2.4
NPIPA2E9PIF3 Y_RNA.531-201ENST00000384589 121 ntBASIC0.08□□□□□ -2.4
NPIPA2E9PIF3 RNU6-588P-201ENST00000410281 105 ntBASIC0.08□□□□□ -2.4
NPIPA2E9PIF3 Y_RNA.793-201ENST00000411222 111 ntBASIC0.08□□□□□ -2.4
NPIPA2E9PIF3 RNU7-137P-201ENST00000516788 62 ntBASIC0.08□□□□□ -2.4
NPIPA2E9PIF3 AC022559.1-201ENST00000520905 205 ntBASIC0.08□□□□□ -2.4
NPIPA2E9PIF3 AC138749.4-201ENST00000563970 127 ntBASIC0.08□□□□□ -2.4
NPIPA2E9PIF3 AL359881.1-201ENST00000602916 267 ntBASIC0.08□□□□□ -2.4
NPIPA2E9PIF3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.08□□□□□ -2.4
NPIPA2E9PIF3 TUG1_4.1-201ENST00000619464 181 ntBASIC0.08□□□□□ -2.4
NPIPA2E9PIF3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
NPIPA2E9PIF3 Y_RNA.119-201ENST00000363301 96 ntBASIC0.07□□□□□ -2.4
NPIPA2E9PIF3 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
NPIPA2E9PIF3 RNU6-1020P-201ENST00000363684 107 ntBASIC0.07□□□□□ -2.4
NPIPA2E9PIF3 RNU6-702P-201ENST00000364982 107 ntBASIC0.07□□□□□ -2.4
NPIPA2E9PIF3 Y_RNA.337-201ENST00000365312 102 ntBASIC0.07□□□□□ -2.4
NPIPA2E9PIF3 MIRLET7F2-201ENST00000385277 83 ntBASIC0.07□□□□□ -2.4
NPIPA2E9PIF3 PCNPP3-201ENST00000393579 471 ntBASIC0.07□□□□□ -2.4
NPIPA2E9PIF3 AC107027.2-201ENST00000512197 115 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms