Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AL670379.3-201ENST00000605040 251 ntBASIC0.75□□□□□ -2.29
SRRM4A7MD48 SNORA2B-201ENST00000384583 137 ntBASIC0.74□□□□□ -2.29
SRRM4A7MD48 MIR608-201ENST00000384820 100 ntBASIC0.74□□□□□ -2.29
SRRM4A7MD48 MIR588-201ENST00000384900 83 ntBASIC0.74□□□□□ -2.29
SRRM4A7MD48 MIR548A3-201ENST00000385297 97 ntBASIC0.74□□□□□ -2.29
SRRM4A7MD48 MIR759-201ENST00000390224 91 ntBASIC0.74□□□□□ -2.29
SRRM4A7MD48 RNU4-69P-201ENST00000410677 143 ntBASIC0.74□□□□□ -2.29
SRRM4A7MD48 RNU7-62P-201ENST00000458856 62 ntBASIC0.74□□□□□ -2.29
SRRM4A7MD48 snoU13.2-201ENST00000459201 104 ntBASIC0.74□□□□□ -2.29
SRRM4A7MD48 MIR3163-201ENST00000581592 73 ntBASIC0.74□□□□□ -2.29
SRRM4A7MD48 uc_338.6-201ENST00000613544 171 ntBASIC0.74□□□□□ -2.29
SRRM4A7MD48 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.74□□□□□ -2.29
SRRM4A7MD48 Y_RNA.299-201ENST00000364973 94 ntBASIC0.73□□□□□ -2.29
SRRM4A7MD48 RNU6-1144P-201ENST00000384247 104 ntBASIC0.73□□□□□ -2.29
SRRM4A7MD48 RNU6-476P-201ENST00000384726 107 ntBASIC0.73□□□□□ -2.29
SRRM4A7MD48 RNA5SP237-201ENST00000410414 113 ntBASIC0.73□□□□□ -2.29
SRRM4A7MD48 RNU6-1064P-201ENST00000410626 104 ntBASIC0.73□□□□□ -2.29
SRRM4A7MD48 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.73□□□□□ -2.29
SRRM4A7MD48 RNU7-6P-201ENST00000516845 62 ntBASIC0.73□□□□□ -2.29
SRRM4A7MD48 RNA5SP102-201ENST00000516865 106 ntBASIC0.73□□□□□ -2.29
SRRM4A7MD48 RNU7-35P-201ENST00000517174 62 ntBASIC0.73□□□□□ -2.29
SRRM4A7MD48 MIR6129-201ENST00000616087 109 ntBASIC0.73□□□□□ -2.29
SRRM4A7MD48 AL662814.1-201ENST00000617364 121 ntBASIC0.73□□□□□ -2.29
SRRM4A7MD48 MIR1-1-201ENST00000362147 71 ntBASIC0.72□□□□□ -2.29
SRRM4A7MD48 RNU6-834P-201ENST00000362367 110 ntBASIC0.72□□□□□ -2.29
SRRM4A7MD48 Y_RNA.273-201ENST00000364703 102 ntBASIC0.72□□□□□ -2.29
SRRM4A7MD48 RNU6-1056P-201ENST00000383996 107 ntBASIC0.72□□□□□ -2.29
SRRM4A7MD48 MIR548D2-201ENST00000384955 97 ntBASIC0.72□□□□□ -2.29
SRRM4A7MD48 MIR563-201ENST00000385080 79 ntBASIC0.72□□□□□ -2.29
SRRM4A7MD48 RNU6-1165P-201ENST00000410119 107 ntBASIC0.72□□□□□ -2.29
SRRM4A7MD48 Y_RNA.629-201ENST00000411368 105 ntBASIC0.72□□□□□ -2.29
SRRM4A7MD48 RNU7-79P-201ENST00000516082 62 ntBASIC0.72□□□□□ -2.29
SRRM4A7MD48 AC007012.1-201ENST00000567192 175 ntBASIC0.72□□□□□ -2.29
SRRM4A7MD48 AC141846.1-201ENST00000568348 142 ntBASIC0.72□□□□□ -2.29
SRRM4A7MD48 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
SRRM4A7MD48 AC087741.2-201ENST00000619415 172 ntBASIC0.72□□□□□ -2.29
SRRM4A7MD48 AL035470.1-201ENST00000622571 220 ntBASIC0.72□□□□□ -2.29
SRRM4A7MD48 Y_RNA.35-201ENST00000362601 101 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 Y_RNA.116-201ENST00000363292 103 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 RNY4P6-201ENST00000363667 96 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 Y_RNA.191-201ENST00000363972 113 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 RNY1P13-201ENST00000365030 105 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 RNU6-580P-201ENST00000365159 107 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 Y_RNA.344-201ENST00000365381 112 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 Y_RNA.362-201ENST00000365518 110 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 SNORD116-21-201ENST00000384507 92 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 RNU6-110P-201ENST00000384508 104 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 RNU6-429P-201ENST00000384582 108 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 Y_RNA.549-201ENST00000384657 102 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 SNORD89-201ENST00000390981 114 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 RNU6-1086P-201ENST00000410930 100 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 snoU13.21-201ENST00000459368 105 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 RPL39P28-201ENST00000465655 155 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 Y_RNA.773-201ENST00000607168 90 ntBASIC0.71□□□□□ -2.3
SRRM4A7MD48 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.71□□□□□ -2.3
SRRM4A7MD48 MIR30D-201ENST00000362283 70 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 SNORD115-19-201ENST00000363098 82 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 SNORD115-18-201ENST00000363293 82 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 Y_RNA.224-201ENST00000364308 111 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 SNORD115-17-201ENST00000364612 82 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 RNU6-616P-201ENST00000384353 107 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 RNU6-880P-201ENST00000384526 107 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 MIR532-201ENST00000385025 91 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 MIR518E-201ENST00000385252 88 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 SNORD77B-201ENST00000391112 67 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.7□□□□□ -2.3
SRRM4A7MD48 SNORD67.1-201ENST00000516618 108 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.7□□□□□ -2.3
SRRM4A7MD48 AL353765.1-201ENST00000605514 183 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 RNU6-94P-201ENST00000607728 107 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 MIR1255B1-201ENST00000636325 63 ntBASIC0.7□□□□□ -2.3
SRRM4A7MD48 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
SRRM4A7MD48 AL589743.1-201ENST00000551932 2712 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 SNORA63.5-201ENST00000363548 123 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 SNORD114-27-201ENST00000363766 70 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 RNU6-1325P-201ENST00000364905 105 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 MT-TF-201ENST00000387314 71 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 MIR1827-201ENST00000408549 66 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 SNORD83.1-201ENST00000411362 77 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 AC015818.7-201ENST00000428754 109 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 AC087499.7-201ENST00000441958 109 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 ACA64.5-201ENST00000516207 127 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 RNU7-137P-201ENST00000516788 62 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 MIR4698-201ENST00000577795 80 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 MIR4679-2-201ENST00000578358 77 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 SNORA4-201ENST00000584302 138 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 FAM71BP1-201ENST00000604431 523 ntBASIC0.69□□□□□ -2.3
SRRM4A7MD48 RNU1-93P-201ENST00000364704 169 ntBASIC0.68□□□□□ -2.3
SRRM4A7MD48 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SRRM4A7MD48 RNU6-949P-201ENST00000384040 107 ntBASIC0.68□□□□□ -2.3
SRRM4A7MD48 Y_RNA.508-201ENST00000384502 114 ntBASIC0.68□□□□□ -2.3
SRRM4A7MD48 SNORD20-201ENST00000384550 80 ntBASIC0.68□□□□□ -2.3
SRRM4A7MD48 MIR206-201ENST00000384872 86 ntBASIC0.68□□□□□ -2.3
SRRM4A7MD48 RPL39P25-201ENST00000449384 154 ntBASIC0.68□□□□□ -2.3
SRRM4A7MD48 PSMC1P5-201ENST00000512850 177 ntBASIC0.68□□□□□ -2.3
SRRM4A7MD48 RNU6-589P-201ENST00000516485 107 ntBASIC0.68□□□□□ -2.3
SRRM4A7MD48 MIR4452-201ENST00000583004 71 ntBASIC0.68□□□□□ -2.3
SRRM4A7MD48 AC105081.1-201ENST00000617727 106 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms