Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RNU6-781P-201ENST00000516377 101 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 AC004812.1-201ENST00000540773 146 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 AC106800.4-201ENST00000614905 153 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 MIR6734-201ENST00000621166 68 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 MIR6767-201ENST00000637302 66 ntBASIC1.05□□□□□ -2.24
SNX9Q9Y5X1 RNU6-647P-201ENST00000364243 107 ntBASIC1.04□□□□□ -2.24
SNX9Q9Y5X1 SNORD113.3-201ENST00000364630 78 ntBASIC1.04□□□□□ -2.24
SNX9Q9Y5X1 Y_RNA.354-201ENST00000365448 111 ntBASIC1.04□□□□□ -2.24
SNX9Q9Y5X1 Y_RNA.531-201ENST00000384589 121 ntBASIC1.04□□□□□ -2.24
SNX9Q9Y5X1 TMSB4XP3-201ENST00000445144 114 ntBASIC1.04□□□□□ -2.24
SNX9Q9Y5X1 RNU6-893P-201ENST00000458841 100 ntBASIC1.04□□□□□ -2.24
SNX9Q9Y5X1 RNU6-1211P-201ENST00000459179 105 ntBASIC1.04□□□□□ -2.24
SNX9Q9Y5X1 RNU7-164P-201ENST00000459221 62 ntBASIC1.04□□□□□ -2.24
SNX9Q9Y5X1 AC113410.1-201ENST00000505029 247 ntBASIC1.04□□□□□ -2.24
SNX9Q9Y5X1 SNORD114-22-201ENST00000365423 72 ntBASIC1.03□□□□□ -2.24
SNX9Q9Y5X1 MIR539-201ENST00000365690 78 ntBASIC1.03□□□□□ -2.24
SNX9Q9Y5X1 RNU6-959P-201ENST00000384671 107 ntBASIC1.03□□□□□ -2.24
SNX9Q9Y5X1 MIR588-201ENST00000384900 83 ntBASIC1.03□□□□□ -2.24
SNX9Q9Y5X1 MT-TI-201ENST00000387365 69 ntBASIC1.03□□□□□ -2.24
SNX9Q9Y5X1 AC063976.4-201ENST00000421971 163 ntBASIC1.03□□□□□ -2.24
SNX9Q9Y5X1 MIR1270-201ENST00000459320 83 ntBASIC1.03□□□□□ -2.24
SNX9Q9Y5X1 snoU13.21-201ENST00000459368 105 ntBASIC1.03□□□□□ -2.24
SNX9Q9Y5X1 RNA5SP220-201ENST00000516298 104 ntBASIC1.03□□□□□ -2.24
SNX9Q9Y5X1 AC023827.1-201ENST00000569247 97 ntBASIC1.03□□□□□ -2.24
SNX9Q9Y5X1 AP000753.3-201ENST00000604083 169 ntBASIC1.03□□□□□ -2.24
SNX9Q9Y5X1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SNX9Q9Y5X1 MIR30D-201ENST00000362283 70 ntBASIC1.02□□□□□ -2.25
SNX9Q9Y5X1 Y_RNA.71-201ENST00000362892 104 ntBASIC1.02□□□□□ -2.25
SNX9Q9Y5X1 RNU1-93P-201ENST00000364704 169 ntBASIC1.02□□□□□ -2.25
SNX9Q9Y5X1 RNU6-42P-201ENST00000384165 107 ntBASIC1.02□□□□□ -2.25
SNX9Q9Y5X1 RNU6-342P-201ENST00000384521 104 ntBASIC1.02□□□□□ -2.25
SNX9Q9Y5X1 Y_RNA.525-201ENST00000384570 113 ntBASIC1.02□□□□□ -2.25
SNX9Q9Y5X1 SNORD111-201ENST00000408139 94 ntBASIC1.02□□□□□ -2.25
SNX9Q9Y5X1 AL022718.1-201ENST00000412004 84 ntBASIC1.02□□□□□ -2.25
SNX9Q9Y5X1 RNY4P20-201ENST00000516678 93 ntBASIC1.02□□□□□ -2.25
SNX9Q9Y5X1 RNU6-1234P-201ENST00000516877 103 ntBASIC1.02□□□□□ -2.25
SNX9Q9Y5X1 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
SNX9Q9Y5X1 SNORA4-201ENST00000584302 138 ntBASIC1.02□□□□□ -2.25
SNX9Q9Y5X1 RNU6-369P-201ENST00000362515 102 ntBASIC1.01□□□□□ -2.25
SNX9Q9Y5X1 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
SNX9Q9Y5X1 SNORD113-1-201ENST00000365321 69 ntBASIC1.01□□□□□ -2.25
SNX9Q9Y5X1 RNU6-80P-201ENST00000384195 107 ntBASIC1.01□□□□□ -2.25
SNX9Q9Y5X1 SNORA2B-201ENST00000384583 137 ntBASIC1.01□□□□□ -2.25
SNX9Q9Y5X1 RNU7-107P-201ENST00000459121 61 ntBASIC1.01□□□□□ -2.25
SNX9Q9Y5X1 RNU7-113P-201ENST00000459273 62 ntBASIC1.01□□□□□ -2.25
SNX9Q9Y5X1 AC022523.2-201ENST00000561045 150 ntBASIC1.01□□□□□ -2.25
SNX9Q9Y5X1 SNORD58C-201ENST00000365223 64 ntBASIC1□□□□□ -2.25
SNX9Q9Y5X1 RNU6-1165P-201ENST00000410119 107 ntBASIC1□□□□□ -2.25
SNX9Q9Y5X1 Y_RNA.630-201ENST00000411370 108 ntBASIC1□□□□□ -2.25
SNX9Q9Y5X1 RNU7-62P-201ENST00000458856 62 ntBASIC1□□□□□ -2.25
SNX9Q9Y5X1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
SNX9Q9Y5X1 RNU6-659P-201ENST00000516454 104 ntBASIC1□□□□□ -2.25
SNX9Q9Y5X1 RNU6-406P-201ENST00000516470 107 ntBASIC1□□□□□ -2.25
SNX9Q9Y5X1 RNU6-94P-201ENST00000607728 107 ntBASIC1□□□□□ -2.25
SNX9Q9Y5X1 SNORA18-201ENST00000384416 132 ntBASIC0.99□□□□□ -2.25
SNX9Q9Y5X1 MIR489-201ENST00000384923 84 ntBASIC0.99□□□□□ -2.25
SNX9Q9Y5X1 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
SNX9Q9Y5X1 RNA5SP33-201ENST00000516687 98 ntBASIC0.99□□□□□ -2.25
SNX9Q9Y5X1 RNU7-35P-201ENST00000517174 62 ntBASIC0.99□□□□□ -2.25
SNX9Q9Y5X1 MIR548AE2-201ENST00000583456 67 ntBASIC0.99□□□□□ -2.25
SNX9Q9Y5X1 AL662814.1-201ENST00000617364 121 ntBASIC0.99□□□□□ -2.25
SNX9Q9Y5X1 AC132825.6-201ENST00000638861 357 ntBASIC0.99□□□□□ -2.25
SNX9Q9Y5X1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.98□□□□□ -2.25
SNX9Q9Y5X1 MIR1263-201ENST00000408324 86 ntBASIC0.98□□□□□ -2.25
SNX9Q9Y5X1 RNA5SP136-201ENST00000410906 107 ntBASIC0.98□□□□□ -2.25
SNX9Q9Y5X1 AC096949.1-201ENST00000412047 152 ntBASIC0.98□□□□□ -2.25
SNX9Q9Y5X1 SNORD124-201ENST00000459577 104 ntBASIC0.98□□□□□ -2.25
SNX9Q9Y5X1 RNU6-772P-201ENST00000516042 105 ntBASIC0.98□□□□□ -2.25
SNX9Q9Y5X1 Y_RNA.712-201ENST00000517011 92 ntBASIC0.98□□□□□ -2.25
SNX9Q9Y5X1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.98□□□□□ -2.25
SNX9Q9Y5X1 MIR520E-201ENST00000384867 87 ntBASIC0.97□□□□□ -2.25
SNX9Q9Y5X1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.97□□□□□ -2.25
SNX9Q9Y5X1 RNU6-1086P-201ENST00000410930 100 ntBASIC0.97□□□□□ -2.25
SNX9Q9Y5X1 RNU4-61P-201ENST00000411243 107 ntBASIC0.97□□□□□ -2.25
SNX9Q9Y5X1 MIR18B-201ENST00000454574 71 ntBASIC0.97□□□□□ -2.25
SNX9Q9Y5X1 AC141846.1-201ENST00000568348 142 ntBASIC0.97□□□□□ -2.25
SNX9Q9Y5X1 MIR3973-201ENST00000579824 107 ntBASIC0.97□□□□□ -2.25
SNX9Q9Y5X1 MIR373-201ENST00000362273 69 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 Y_RNA.198-201ENST00000364013 98 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 RNY1P13-201ENST00000365030 105 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 SNORD116-14-201ENST00000383894 92 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 SNORD116-17-201ENST00000383929 92 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 SNORD116-15-201ENST00000384445 92 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 SNORD116-19-201ENST00000384729 92 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 RNU6-735P-201ENST00000410612 107 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 RNU4-69P-201ENST00000410677 143 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 SNORD83.1-201ENST00000411362 77 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 RNU7-79P-201ENST00000516082 62 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 MIR6857-201ENST00000613267 93 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 AL365222.1-201ENST00000614661 98 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 MIR3914-2-201ENST00000637339 95 ntBASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
SNX9Q9Y5X1 MTND5P18-201ENST00000445624 1801 ntBASIC0.95□□□□□ -2.26
SNX9Q9Y5X1 Y_RNA.127-201ENST00000363386 109 ntBASIC0.95□□□□□ -2.26
SNX9Q9Y5X1 RNU6-934P-201ENST00000365154 107 ntBASIC0.95□□□□□ -2.26
SNX9Q9Y5X1 Y_RNA.528-201ENST00000384575 108 ntBASIC0.95□□□□□ -2.26
SNX9Q9Y5X1 COX6CP6-201ENST00000490840 228 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 377.3 ms