Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNU6-1118P-201ENST00000410382 104 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-1076P-201ENST00000410397 104 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-355P-201ENST00000410427 104 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-791P-201ENST00000410467 104 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-705P-201ENST00000410601 104 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-1100P-201ENST00000410691 104 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-860P-201ENST00000410860 104 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-1086P-201ENST00000410930 100 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-1217P-201ENST00000411276 104 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-785P-201ENST00000411324 104 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 U6.90-201ENST00000614007 104 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 U6.70-201ENST00000620287 104 ntBASIC1.05□□□□□ -2.24
COL4A3BPQ9Y5P4 SNORD115-2-201ENST00000362842 82 ntBASIC1.04□□□□□ -2.24
COL4A3BPQ9Y5P4 Y_RNA.171-201ENST00000363760 102 ntBASIC1.04□□□□□ -2.24
COL4A3BPQ9Y5P4 Y_RNA.180-201ENST00000363867 113 ntBASIC1.04□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-1187P-201ENST00000364771 110 ntBASIC1.04□□□□□ -2.24
COL4A3BPQ9Y5P4 SNORD115-20-201ENST00000365099 82 ntBASIC1.04□□□□□ -2.24
COL4A3BPQ9Y5P4 MIR532-201ENST00000385025 91 ntBASIC1.04□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.04□□□□□ -2.24
COL4A3BPQ9Y5P4 MIR548X2-201ENST00000579776 100 ntBASIC1.04□□□□□ -2.24
COL4A3BPQ9Y5P4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.04□□□□□ -2.24
COL4A3BPQ9Y5P4 MIR373-201ENST00000362273 69 ntBASIC1.03□□□□□ -2.24
COL4A3BPQ9Y5P4 Y_RNA.398-201ENST00000383952 99 ntBASIC1.03□□□□□ -2.24
COL4A3BPQ9Y5P4 Y_RNA.400-201ENST00000383963 111 ntBASIC1.03□□□□□ -2.24
COL4A3BPQ9Y5P4 Y_RNA.464-201ENST00000384282 110 ntBASIC1.03□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU7-197P-201ENST00000458836 62 ntBASIC1.03□□□□□ -2.24
COL4A3BPQ9Y5P4 Y_RNA.686-201ENST00000516548 134 ntBASIC1.03□□□□□ -2.24
COL4A3BPQ9Y5P4 RNA5SP33-201ENST00000516687 98 ntBASIC1.03□□□□□ -2.24
COL4A3BPQ9Y5P4 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.03□□□□□ -2.24
COL4A3BPQ9Y5P4 AC011195.1-201ENST00000578177 177 ntBASIC1.03□□□□□ -2.24
COL4A3BPQ9Y5P4 RNU6-949P-201ENST00000384040 107 ntBASIC1.02□□□□□ -2.25
COL4A3BPQ9Y5P4 MIR573-201ENST00000384964 99 ntBASIC1.02□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU7-56P-201ENST00000458744 62 ntBASIC1.02□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU7-164P-201ENST00000459221 62 ntBASIC1.02□□□□□ -2.25
COL4A3BPQ9Y5P4 RPS29P1-201ENST00000465274 159 ntBASIC1.02□□□□□ -2.25
COL4A3BPQ9Y5P4 RPL39P28-201ENST00000465655 155 ntBASIC1.02□□□□□ -2.25
COL4A3BPQ9Y5P4 Y_RNA.692-201ENST00000516627 105 ntBASIC1.02□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU7-156P-201ENST00000517214 74 ntBASIC1.02□□□□□ -2.25
COL4A3BPQ9Y5P4 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
COL4A3BPQ9Y5P4 MIR6857-201ENST00000613267 93 ntBASIC1.02□□□□□ -2.25
COL4A3BPQ9Y5P4 RNY1P11-201ENST00000363759 113 ntBASIC1.01□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU6-309P-201ENST00000364573 106 ntBASIC1.01□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU6-342P-201ENST00000384521 104 ntBASIC1.01□□□□□ -2.25
COL4A3BPQ9Y5P4 Y_RNA.531-201ENST00000384589 121 ntBASIC1.01□□□□□ -2.25
COL4A3BPQ9Y5P4 MIR605-201ENST00000385078 83 ntBASIC1.01□□□□□ -2.25
COL4A3BPQ9Y5P4 Y_RNA.651-201ENST00000459380 103 ntBASIC1.01□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU5E-3P-201ENST00000515913 68 ntBASIC1.01□□□□□ -2.25
COL4A3BPQ9Y5P4 SNORA25.12-201ENST00000516202 82 ntBASIC1.01□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU6-1258P-201ENST00000516911 111 ntBASIC1.01□□□□□ -2.25
COL4A3BPQ9Y5P4 SNORD92-201ENST00000585078 85 ntBASIC1.01□□□□□ -2.25
COL4A3BPQ9Y5P4 MIR4653-201ENST00000585107 83 ntBASIC1.01□□□□□ -2.25
COL4A3BPQ9Y5P4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.01□□□□□ -2.25
COL4A3BPQ9Y5P4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.01□□□□□ -2.25
COL4A3BPQ9Y5P4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU6-915P-201ENST00000364943 103 ntBASIC1□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU4-45P-201ENST00000365469 141 ntBASIC1□□□□□ -2.25
COL4A3BPQ9Y5P4 MIR518E-201ENST00000385252 88 ntBASIC1□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU4-83P-201ENST00000410863 133 ntBASIC1□□□□□ -2.25
COL4A3BPQ9Y5P4 AC244098.3-201ENST00000424803 96 ntBASIC1□□□□□ -2.25
COL4A3BPQ9Y5P4 AC004812.1-201ENST00000540773 146 ntBASIC1□□□□□ -2.25
COL4A3BPQ9Y5P4 Y_RNA.215-201ENST00000364204 112 ntBASIC0.99□□□□□ -2.25
COL4A3BPQ9Y5P4 Y_RNA.299-201ENST00000364973 94 ntBASIC0.99□□□□□ -2.25
COL4A3BPQ9Y5P4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU6-460P-201ENST00000391158 108 ntBASIC0.99□□□□□ -2.25
COL4A3BPQ9Y5P4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.99□□□□□ -2.25
COL4A3BPQ9Y5P4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.99□□□□□ -2.25
COL4A3BPQ9Y5P4 AP001328.1-201ENST00000528550 176 ntBASIC0.99□□□□□ -2.25
COL4A3BPQ9Y5P4 Y_RNA.470-201ENST00000384307 117 ntBASIC0.98□□□□□ -2.25
COL4A3BPQ9Y5P4 AL512326.2-201ENST00000426359 151 ntBASIC0.98□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU7-102P-201ENST00000458948 62 ntBASIC0.98□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU7-79P-201ENST00000516082 62 ntBASIC0.98□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU2-35P-201ENST00000516446 142 ntBASIC0.98□□□□□ -2.25
COL4A3BPQ9Y5P4 RNU7-35P-201ENST00000517174 62 ntBASIC0.98□□□□□ -2.25
COL4A3BPQ9Y5P4 AP001340.1-201ENST00000624405 217 ntBASIC0.98□□□□□ -2.25
COL4A3BPQ9Y5P4 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
COL4A3BPQ9Y5P4 AL137067.1-201ENST00000615933 120 ntBASIC0.97□□□□□ -2.25
COL4A3BPQ9Y5P4 Y_RNA.298-201ENST00000364960 107 ntBASIC0.96□□□□□ -2.26
COL4A3BPQ9Y5P4 RNY1P13-201ENST00000365030 105 ntBASIC0.96□□□□□ -2.26
COL4A3BPQ9Y5P4 Y_RNA.355-201ENST00000365462 98 ntBASIC0.96□□□□□ -2.26
COL4A3BPQ9Y5P4 U8.15-201ENST00000390947 134 ntBASIC0.96□□□□□ -2.26
COL4A3BPQ9Y5P4 RNA5SP222-201ENST00000411039 105 ntBASIC0.96□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU6-1212P-201ENST00000517023 104 ntBASIC0.96□□□□□ -2.26
COL4A3BPQ9Y5P4 AC090897.1-201ENST00000580909 226 ntBASIC0.96□□□□□ -2.26
COL4A3BPQ9Y5P4 AL078603.1-201ENST00000603824 313 ntBASIC0.96□□□□□ -2.26
COL4A3BPQ9Y5P4 MIR6788-201ENST00000618842 66 ntBASIC0.96□□□□□ -2.26
COL4A3BPQ9Y5P4 AC021753.1-201ENST00000635724 168 ntBASIC0.96□□□□□ -2.26
COL4A3BPQ9Y5P4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
COL4A3BPQ9Y5P4 Y_RNA.366-201ENST00000365540 102 ntBASIC0.95□□□□□ -2.26
COL4A3BPQ9Y5P4 Y_RNA.488-201ENST00000384403 102 ntBASIC0.95□□□□□ -2.26
COL4A3BPQ9Y5P4 Y_RNA.508-201ENST00000384502 114 ntBASIC0.95□□□□□ -2.26
COL4A3BPQ9Y5P4 MIR548J-201ENST00000408833 112 ntBASIC0.95□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU7-123P-201ENST00000515911 60 ntBASIC0.95□□□□□ -2.26
COL4A3BPQ9Y5P4 FAM71BP1-201ENST00000604431 523 ntBASIC0.95□□□□□ -2.26
COL4A3BPQ9Y5P4 Y_RNA.420-201ENST00000384043 110 ntBASIC0.94□□□□□ -2.26
COL4A3BPQ9Y5P4 SNORA32-201ENST00000384072 121 ntBASIC0.94□□□□□ -2.26
COL4A3BPQ9Y5P4 AP003327.1-201ENST00000529684 127 ntBASIC0.94□□□□□ -2.26
COL4A3BPQ9Y5P4 MIR3121-201ENST00000579680 77 ntBASIC0.94□□□□□ -2.26
COL4A3BPQ9Y5P4 MIR548AE2-201ENST00000583456 67 ntBASIC0.94□□□□□ -2.26
COL4A3BPQ9Y5P4 MIR151B-201ENST00000584249 96 ntBASIC0.94□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU6-403P-201ENST00000363163 104 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 251.9 ms