Protein–RNA interactions for Protein: Q9UPN9

TRIM33, E3 ubiquitin-protein ligase TRIM33, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33Q9UPN9 AC027119.1-201ENST00000440877 241 ntBASIC2.27□□□□□ -2.05
TRIM33Q9UPN9 JTBP1-201ENST00000441314 247 ntBASIC2.27□□□□□ -2.05
TRIM33Q9UPN9 UBE2DNL-203ENST00000474922 222 ntBASIC2.27□□□□□ -2.05
TRIM33Q9UPN9 AC242498.1-201ENST00000604134 111 ntBASIC2.27□□□□□ -2.05
TRIM33Q9UPN9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.27□□□□□ -2.05
TRIM33Q9UPN9 WWP1P1-201ENST00000466609 2769 ntBASIC2.27□□□□□ -2.05
TRIM33Q9UPN9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRIM33Q9UPN9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRIM33Q9UPN9 AC062016.1-201ENST00000355719 319 ntBASIC2.26□□□□□ -2.05
TRIM33Q9UPN9 Y_RNA.168-201ENST00000363740 102 ntBASIC2.26□□□□□ -2.05
TRIM33Q9UPN9 RNA5SP37-201ENST00000365420 130 ntBASIC2.26□□□□□ -2.05
TRIM33Q9UPN9 RNA5SP259-201ENST00000365541 109 ntBASIC2.26□□□□□ -2.05
TRIM33Q9UPN9 AC093729.1-201ENST00000513074 128 ntBASIC2.26□□□□□ -2.05
TRIM33Q9UPN9 RNA5SP445-201ENST00000515889 115 ntBASIC2.26□□□□□ -2.05
TRIM33Q9UPN9 RNA5SP320-201ENST00000516263 124 ntBASIC2.26□□□□□ -2.05
TRIM33Q9UPN9 MIR4287-201ENST00000579398 78 ntBASIC2.26□□□□□ -2.05
TRIM33Q9UPN9 PRELID3BP2-201ENST00000605362 201 ntBASIC2.26□□□□□ -2.05
TRIM33Q9UPN9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
TRIM33Q9UPN9 Y_RNA.500-201ENST00000384466 111 ntBASIC2.25□□□□□ -2.05
TRIM33Q9UPN9 MIR563-201ENST00000385080 79 ntBASIC2.25□□□□□ -2.05
TRIM33Q9UPN9 RNU6-717P-201ENST00000459076 104 ntBASIC2.25□□□□□ -2.05
TRIM33Q9UPN9 AC026436.1-201ENST00000510537 270 ntBASIC2.25□□□□□ -2.05
TRIM33Q9UPN9 RNA5SP24-201ENST00000516478 95 ntBASIC2.25□□□□□ -2.05
TRIM33Q9UPN9 MIR514B-201ENST00000516774 80 ntBASIC2.25□□□□□ -2.05
TRIM33Q9UPN9 AL357312.1-201ENST00000603879 298 ntBASIC2.25□□□□□ -2.05
TRIM33Q9UPN9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM33Q9UPN9 Y_RNA.94-201ENST00000363068 106 ntBASIC2.24□□□□□ -2.05
TRIM33Q9UPN9 SNORD115-37-201ENST00000363768 82 ntBASIC2.24□□□□□ -2.05
TRIM33Q9UPN9 RNU6-519P-201ENST00000410590 108 ntBASIC2.24□□□□□ -2.05
TRIM33Q9UPN9 SNRPGP12-201ENST00000449481 213 ntBASIC2.24□□□□□ -2.05
TRIM33Q9UPN9 AC108938.1-201ENST00000451204 136 ntBASIC2.24□□□□□ -2.05
TRIM33Q9UPN9 AC090255.1-201ENST00000495779 349 ntBASIC2.24□□□□□ -2.05
TRIM33Q9UPN9 MIR3192-201ENST00000584920 77 ntBASIC2.24□□□□□ -2.05
TRIM33Q9UPN9 MIR8066-201ENST00000617280 78 ntBASIC2.24□□□□□ -2.05
TRIM33Q9UPN9 RNU6-776P-201ENST00000364403 104 ntBASIC2.23□□□□□ -2.05
TRIM33Q9UPN9 RNU6-1022P-201ENST00000365049 104 ntBASIC2.23□□□□□ -2.05
TRIM33Q9UPN9 MIR588-201ENST00000384900 83 ntBASIC2.23□□□□□ -2.05
TRIM33Q9UPN9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
TRIM33Q9UPN9 RNA5SP212-201ENST00000391223 107 ntBASIC2.23□□□□□ -2.05
TRIM33Q9UPN9 AC090897.1-201ENST00000580909 226 ntBASIC2.23□□□□□ -2.05
TRIM33Q9UPN9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.23□□□□□ -2.05
TRIM33Q9UPN9 AP000942.3-201ENST00000603702 160 ntBASIC2.23□□□□□ -2.05
TRIM33Q9UPN9 MIR6766-201ENST00000622641 72 ntBASIC2.23□□□□□ -2.05
TRIM33Q9UPN9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
TRIM33Q9UPN9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
TRIM33Q9UPN9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.23□□□□□ -2.05
TRIM33Q9UPN9 AL596028.1-201ENST00000326971 197 ntBASIC2.22□□□□□ -2.05
TRIM33Q9UPN9 RNU6-396P-201ENST00000365369 105 ntBASIC2.22□□□□□ -2.05
TRIM33Q9UPN9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.22□□□□□ -2.05
TRIM33Q9UPN9 MIR1302-7-201ENST00000408841 72 ntBASIC2.22□□□□□ -2.05
TRIM33Q9UPN9 AC087499.7-201ENST00000441958 109 ntBASIC2.22□□□□□ -2.05
TRIM33Q9UPN9 RNU6-922P-201ENST00000516753 99 ntBASIC2.22□□□□□ -2.05
TRIM33Q9UPN9 RNU6-250P-201ENST00000516958 103 ntBASIC2.22□□□□□ -2.05
TRIM33Q9UPN9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.22□□□□□ -2.05
TRIM33Q9UPN9 AC138749.4-201ENST00000563970 127 ntBASIC2.22□□□□□ -2.05
TRIM33Q9UPN9 AC140658.3-201ENST00000567603 271 ntBASIC2.22□□□□□ -2.05
TRIM33Q9UPN9 MIR4264-201ENST00000583520 66 ntBASIC2.22□□□□□ -2.05
TRIM33Q9UPN9 MIR4712-201ENST00000583750 82 ntBASIC2.22□□□□□ -2.05
TRIM33Q9UPN9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.22□□□□□ -2.05
TRIM33Q9UPN9 RNU6-301P-201ENST00000384277 107 ntBASIC2.21□□□□□ -2.06
TRIM33Q9UPN9 MIR17-201ENST00000385012 84 ntBASIC2.21□□□□□ -2.06
TRIM33Q9UPN9 HMGN2P38-201ENST00000423806 265 ntBASIC2.21□□□□□ -2.06
TRIM33Q9UPN9 RPS27P21-201ENST00000486977 252 ntBASIC2.21□□□□□ -2.06
TRIM33Q9UPN9 MIR5007-201ENST00000583098 95 ntBASIC2.21□□□□□ -2.06
TRIM33Q9UPN9 SNORA4-201ENST00000584302 138 ntBASIC2.21□□□□□ -2.06
TRIM33Q9UPN9 MIR5002-201ENST00000584713 97 ntBASIC2.21□□□□□ -2.06
TRIM33Q9UPN9 AL512598.1-201ENST00000610158 273 ntBASIC2.21□□□□□ -2.06
TRIM33Q9UPN9 AL096861.1-201ENST00000610899 123 ntBASIC2.21□□□□□ -2.06
TRIM33Q9UPN9 RNA5SP160-201ENST00000364866 120 ntBASIC2.2□□□□□ -2.06
TRIM33Q9UPN9 RNU6-571P-201ENST00000384128 107 ntBASIC2.2□□□□□ -2.06
TRIM33Q9UPN9 MT-TN-201ENST00000387400 73 ntBASIC2.2□□□□□ -2.06
TRIM33Q9UPN9 HSPE1P24-201ENST00000450782 238 ntBASIC2.2□□□□□ -2.06
TRIM33Q9UPN9 RNA5SP233-201ENST00000459153 113 ntBASIC2.2□□□□□ -2.06
TRIM33Q9UPN9 SNORD53-201ENST00000579969 78 ntBASIC2.2□□□□□ -2.06
TRIM33Q9UPN9 MIR4448-201ENST00000584360 86 ntBASIC2.2□□□□□ -2.06
TRIM33Q9UPN9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.2□□□□□ -2.06
TRIM33Q9UPN9 AC008163.1-202ENST00000636004 2889 ntBASIC2.19□□□□□ -2.06
TRIM33Q9UPN9 Y_RNA.57-201ENST00000362806 113 ntBASIC2.19□□□□□ -2.06
TRIM33Q9UPN9 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
TRIM33Q9UPN9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TRIM33Q9UPN9 MIR1236-201ENST00000408340 102 ntBASIC2.19□□□□□ -2.06
TRIM33Q9UPN9 RPL23AP94-201ENST00000512518 302 ntBASIC2.19□□□□□ -2.06
TRIM33Q9UPN9 RNU6-65P-201ENST00000516332 98 ntBASIC2.19□□□□□ -2.06
TRIM33Q9UPN9 AC015688.6-201ENST00000577737 104 ntBASIC2.19□□□□□ -2.06
TRIM33Q9UPN9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM33Q9UPN9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM33Q9UPN9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM33Q9UPN9 MIR449A-201ENST00000362113 91 ntBASIC2.18□□□□□ -2.06
TRIM33Q9UPN9 MIR30D-201ENST00000362283 70 ntBASIC2.18□□□□□ -2.06
TRIM33Q9UPN9 RNU4-83P-201ENST00000410863 133 ntBASIC2.18□□□□□ -2.06
TRIM33Q9UPN9 SNORD4B-201ENST00000459083 72 ntBASIC2.18□□□□□ -2.06
TRIM33Q9UPN9 MIR2115-201ENST00000516657 100 ntBASIC2.18□□□□□ -2.06
TRIM33Q9UPN9 RNU6-850P-201ENST00000516934 103 ntBASIC2.18□□□□□ -2.06
TRIM33Q9UPN9 MIR4500-201ENST00000579472 76 ntBASIC2.18□□□□□ -2.06
TRIM33Q9UPN9 GHRLOS.1-201ENST00000610995 70 ntBASIC2.18□□□□□ -2.06
TRIM33Q9UPN9 AL773524.1-201ENST00000614065 229 ntBASIC2.18□□□□□ -2.06
TRIM33Q9UPN9 MIR6817-201ENST00000615588 66 ntBASIC2.18□□□□□ -2.06
TRIM33Q9UPN9 MIR6740-201ENST00000618268 113 ntBASIC2.18□□□□□ -2.06
TRIM33Q9UPN9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
TRIM33Q9UPN9 RNU6-439P-201ENST00000384188 106 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms