Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CDC42EP3Q9UKI2 RNU6-1313P-201ENST00000362622 102 ntBASIC1.69□□□□□ -2.14
CDC42EP3Q9UKI2 Y_RNA.93-201ENST00000363066 109 ntBASIC1.69□□□□□ -2.14
CDC42EP3Q9UKI2 RNY1P10-201ENST00000363268 113 ntBASIC1.69□□□□□ -2.14
CDC42EP3Q9UKI2 SNORA25.9-201ENST00000365087 128 ntBASIC1.69□□□□□ -2.14
CDC42EP3Q9UKI2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CDC42EP3Q9UKI2 AC027119.1-201ENST00000440877 241 ntBASIC1.69□□□□□ -2.14
CDC42EP3Q9UKI2 MIR5582-201ENST00000579697 68 ntBASIC1.69□□□□□ -2.14
CDC42EP3Q9UKI2 MIR8063-201ENST00000621930 81 ntBASIC1.69□□□□□ -2.14
CDC42EP3Q9UKI2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CDC42EP3Q9UKI2 Y_RNA.10-201ENST00000362371 110 ntBASIC1.68□□□□□ -2.14
CDC42EP3Q9UKI2 Y_RNA.369-201ENST00000365568 117 ntBASIC1.68□□□□□ -2.14
CDC42EP3Q9UKI2 SNORA7.5-201ENST00000410672 110 ntBASIC1.68□□□□□ -2.14
CDC42EP3Q9UKI2 MTATP8P2-201ENST00000435212 202 ntBASIC1.68□□□□□ -2.14
CDC42EP3Q9UKI2 AC079140.2-201ENST00000506193 142 ntBASIC1.68□□□□□ -2.14
CDC42EP3Q9UKI2 SCARNA23-201ENST00000516060 130 ntBASIC1.68□□□□□ -2.14
CDC42EP3Q9UKI2 RNU7-2P-201ENST00000516096 62 ntBASIC1.68□□□□□ -2.14
CDC42EP3Q9UKI2 RNU11-2P-201ENST00000516898 142 ntBASIC1.68□□□□□ -2.14
CDC42EP3Q9UKI2 MIR3198-2-201ENST00000577868 80 ntBASIC1.68□□□□□ -2.14
CDC42EP3Q9UKI2 RNU6-396P-201ENST00000365369 105 ntBASIC1.67□□□□□ -2.14
CDC42EP3Q9UKI2 RNU6-1201P-201ENST00000384227 107 ntBASIC1.67□□□□□ -2.14
CDC42EP3Q9UKI2 MIR563-201ENST00000385080 79 ntBASIC1.67□□□□□ -2.14
CDC42EP3Q9UKI2 MIR518E-201ENST00000385252 88 ntBASIC1.67□□□□□ -2.14
CDC42EP3Q9UKI2 MT-TN-201ENST00000387400 73 ntBASIC1.67□□□□□ -2.14
CDC42EP3Q9UKI2 SUMO2P12-201ENST00000405924 140 ntBASIC1.67□□□□□ -2.14
CDC42EP3Q9UKI2 RNU6-321P-201ENST00000410912 106 ntBASIC1.67□□□□□ -2.14
CDC42EP3Q9UKI2 AC096949.1-201ENST00000412047 152 ntBASIC1.67□□□□□ -2.14
CDC42EP3Q9UKI2 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
CDC42EP3Q9UKI2 RPL39P39-201ENST00000455840 151 ntBASIC1.67□□□□□ -2.14
CDC42EP3Q9UKI2 snoU13.2-201ENST00000459201 104 ntBASIC1.67□□□□□ -2.14
CDC42EP3Q9UKI2 MIR3664-201ENST00000579074 99 ntBASIC1.67□□□□□ -2.14
CDC42EP3Q9UKI2 MIR2052-201ENST00000636055 55 ntBASIC1.67□□□□□ -2.14
CDC42EP3Q9UKI2 SNORD114-10-201ENST00000363409 72 ntBASIC1.66□□□□□ -2.14
CDC42EP3Q9UKI2 MIR206-201ENST00000384872 86 ntBASIC1.66□□□□□ -2.14
CDC42EP3Q9UKI2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.66□□□□□ -2.14
CDC42EP3Q9UKI2 RPL30P7-201ENST00000479312 323 ntBASIC1.66□□□□□ -2.14
CDC42EP3Q9UKI2 TRMT112P2-201ENST00000512910 132 ntBASIC1.66□□□□□ -2.14
CDC42EP3Q9UKI2 RNU7-137P-201ENST00000516788 62 ntBASIC1.66□□□□□ -2.14
CDC42EP3Q9UKI2 RNU6-165P-201ENST00000517170 99 ntBASIC1.66□□□□□ -2.14
CDC42EP3Q9UKI2 MIR5002-201ENST00000584713 97 ntBASIC1.66□□□□□ -2.14
CDC42EP3Q9UKI2 SNRPGP19-201ENST00000603826 189 ntBASIC1.66□□□□□ -2.14
CDC42EP3Q9UKI2 MIR8070-201ENST00000616510 88 ntBASIC1.66□□□□□ -2.14
CDC42EP3Q9UKI2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.65□□□□□ -2.14
CDC42EP3Q9UKI2 RNA5SP160-201ENST00000364866 120 ntBASIC1.65□□□□□ -2.15
CDC42EP3Q9UKI2 RNY1P13-201ENST00000365030 105 ntBASIC1.65□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-1307P-201ENST00000391012 103 ntBASIC1.65□□□□□ -2.15
CDC42EP3Q9UKI2 RNU1-78P-201ENST00000391248 165 ntBASIC1.65□□□□□ -2.15
CDC42EP3Q9UKI2 MIR1185-1-201ENST00000408598 86 ntBASIC1.65□□□□□ -2.15
CDC42EP3Q9UKI2 SNORD67.1-201ENST00000516618 108 ntBASIC1.65□□□□□ -2.15
CDC42EP3Q9UKI2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.65□□□□□ -2.15
CDC42EP3Q9UKI2 AL662814.1-201ENST00000617364 121 ntBASIC1.65□□□□□ -2.15
CDC42EP3Q9UKI2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 RNA5SP264-201ENST00000363115 107 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 SNORA25.3-201ENST00000363205 127 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 RNY4P30-201ENST00000410216 95 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 UBL5P1-201ENST00000507979 193 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-947P-201ENST00000516264 106 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-970P-201ENST00000516312 107 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 SNORA25.15-201ENST00000516487 89 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 MIR2115-201ENST00000516657 100 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-1006P-201ENST00000516998 103 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 AC141846.1-201ENST00000568348 142 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 MIR4264-201ENST00000583520 66 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 Y_RNA.783-201ENST00000613546 102 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 AL442128.1-201ENST00000615151 90 ntBASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CDC42EP3Q9UKI2 Y_RNA.107-201ENST00000363190 121 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 MIR488-201ENST00000365739 83 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 MIR676-201ENST00000390702 67 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-447P-201ENST00000410293 104 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-1118P-201ENST00000410382 104 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-1076P-201ENST00000410397 104 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-355P-201ENST00000410427 104 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-791P-201ENST00000410467 104 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-705P-201ENST00000410601 104 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-1100P-201ENST00000410691 104 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-860P-201ENST00000410860 104 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-1217P-201ENST00000411276 104 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-785P-201ENST00000411324 104 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 BTF3P4-201ENST00000418852 495 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 HMGN2P19-201ENST00000425149 265 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 snoU13.18-201ENST00000459483 104 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 AC019176.1-201ENST00000518519 225 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 MIR3122-201ENST00000577243 73 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 AL359821.1-201ENST00000605519 182 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 U6.90-201ENST00000614007 104 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 U6.70-201ENST00000620287 104 ntBASIC1.63□□□□□ -2.15
CDC42EP3Q9UKI2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CDC42EP3Q9UKI2 AP000648.3-201ENST00000623539 4507 ntBASIC1.62□□□□□ -2.15
CDC42EP3Q9UKI2 MIR377-201ENST00000362145 69 ntBASIC1.62□□□□□ -2.15
CDC42EP3Q9UKI2 RNA5SP190-201ENST00000365222 118 ntBASIC1.62□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-949P-201ENST00000384040 107 ntBASIC1.62□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-1237P-201ENST00000384777 107 ntBASIC1.62□□□□□ -2.15
CDC42EP3Q9UKI2 MIR588-201ENST00000384900 83 ntBASIC1.62□□□□□ -2.15
CDC42EP3Q9UKI2 RNU6-613P-201ENST00000410412 108 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms