Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNU6-1086P-201ENST00000410930 100 ntBASIC1.78□□□□□ -2.12
DDX41Q9UJV9 SNORD53B-201ENST00000577887 78 ntBASIC1.78□□□□□ -2.12
DDX41Q9UJV9 MIR6129-201ENST00000616087 109 ntBASIC1.78□□□□□ -2.12
DDX41Q9UJV9 SNORA25.9-201ENST00000365087 128 ntBASIC1.77□□□□□ -2.13
DDX41Q9UJV9 RNU6-342P-201ENST00000384521 104 ntBASIC1.77□□□□□ -2.13
DDX41Q9UJV9 MT-TI-201ENST00000387365 69 ntBASIC1.77□□□□□ -2.13
DDX41Q9UJV9 RPL39P25-201ENST00000449384 154 ntBASIC1.77□□□□□ -2.13
DDX41Q9UJV9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.77□□□□□ -2.13
DDX41Q9UJV9 Y_RNA.118-201ENST00000363300 101 ntBASIC1.76□□□□□ -2.13
DDX41Q9UJV9 RNU6-654P-201ENST00000364373 107 ntBASIC1.76□□□□□ -2.13
DDX41Q9UJV9 SNORA2B-201ENST00000384583 137 ntBASIC1.76□□□□□ -2.13
DDX41Q9UJV9 MIR222-201ENST00000384992 110 ntBASIC1.76□□□□□ -2.13
DDX41Q9UJV9 RNU7-90P-201ENST00000459216 62 ntBASIC1.76□□□□□ -2.13
DDX41Q9UJV9 RNU7-79P-201ENST00000516082 62 ntBASIC1.76□□□□□ -2.13
DDX41Q9UJV9 RNU7-35P-201ENST00000517174 62 ntBASIC1.76□□□□□ -2.13
DDX41Q9UJV9 FAM71BP1-201ENST00000604431 523 ntBASIC1.76□□□□□ -2.13
DDX41Q9UJV9 BX248123.2-201ENST00000606318 124 ntBASIC1.76□□□□□ -2.13
DDX41Q9UJV9 Y_RNA.168-201ENST00000363740 102 ntBASIC1.75□□□□□ -2.13
DDX41Q9UJV9 SNORD113.3-201ENST00000364630 78 ntBASIC1.75□□□□□ -2.13
DDX41Q9UJV9 MIR320A-201ENST00000385302 82 ntBASIC1.75□□□□□ -2.13
DDX41Q9UJV9 SNORA75.2-201ENST00000391138 150 ntBASIC1.75□□□□□ -2.13
DDX41Q9UJV9 SNORA75.3-201ENST00000391231 150 ntBASIC1.75□□□□□ -2.13
DDX41Q9UJV9 AL662814.1-201ENST00000617364 121 ntBASIC1.75□□□□□ -2.13
DDX41Q9UJV9 Y_RNA.35-201ENST00000362601 101 ntBASIC1.74□□□□□ -2.13
DDX41Q9UJV9 Y_RNA.362-201ENST00000365518 110 ntBASIC1.74□□□□□ -2.13
DDX41Q9UJV9 Y_RNA.508-201ENST00000384502 114 ntBASIC1.74□□□□□ -2.13
DDX41Q9UJV9 MIR517C-201ENST00000385103 95 ntBASIC1.74□□□□□ -2.13
DDX41Q9UJV9 SNORD12-201ENST00000391002 90 ntBASIC1.74□□□□□ -2.13
DDX41Q9UJV9 SNORA67.6-201ENST00000391093 99 ntBASIC1.74□□□□□ -2.13
DDX41Q9UJV9 MIR1323-201ENST00000408090 73 ntBASIC1.74□□□□□ -2.13
DDX41Q9UJV9 RNU6-1165P-201ENST00000410119 107 ntBASIC1.74□□□□□ -2.13
DDX41Q9UJV9 RNU7-21P-201ENST00000459430 62 ntBASIC1.74□□□□□ -2.13
DDX41Q9UJV9 RPL39P34-201ENST00000477141 156 ntBASIC1.74□□□□□ -2.13
DDX41Q9UJV9 AC087741.2-201ENST00000619415 172 ntBASIC1.74□□□□□ -2.13
DDX41Q9UJV9 Y_RNA.49-201ENST00000362714 112 ntBASIC1.73□□□□□ -2.13
DDX41Q9UJV9 Y_RNA.507-201ENST00000384500 99 ntBASIC1.73□□□□□ -2.13
DDX41Q9UJV9 SNORD20-201ENST00000384550 80 ntBASIC1.73□□□□□ -2.13
DDX41Q9UJV9 SNORD79.1-201ENST00000516069 84 ntBASIC1.73□□□□□ -2.13
DDX41Q9UJV9 RNU6-919P-201ENST00000516731 104 ntBASIC1.73□□□□□ -2.13
DDX41Q9UJV9 AC141846.1-201ENST00000568348 142 ntBASIC1.73□□□□□ -2.13
DDX41Q9UJV9 SNORD115-19-201ENST00000363098 82 ntBASIC1.72□□□□□ -2.13
DDX41Q9UJV9 SNORD115-18-201ENST00000363293 82 ntBASIC1.72□□□□□ -2.13
DDX41Q9UJV9 SNORA63.5-201ENST00000363548 123 ntBASIC1.72□□□□□ -2.13
DDX41Q9UJV9 SNORD115-17-201ENST00000364612 82 ntBASIC1.72□□□□□ -2.13
DDX41Q9UJV9 Y_RNA.309-201ENST00000365046 111 ntBASIC1.72□□□□□ -2.13
DDX41Q9UJV9 RNU6-580P-201ENST00000365159 107 ntBASIC1.72□□□□□ -2.13
DDX41Q9UJV9 RNU6-215P-201ENST00000365169 102 ntBASIC1.72□□□□□ -2.13
DDX41Q9UJV9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.72□□□□□ -2.13
DDX41Q9UJV9 RNU6-429P-201ENST00000384582 108 ntBASIC1.72□□□□□ -2.13
DDX41Q9UJV9 MT-TF-201ENST00000387314 71 ntBASIC1.72□□□□□ -2.13
DDX41Q9UJV9 SNORD111-201ENST00000408139 94 ntBASIC1.72□□□□□ -2.13
DDX41Q9UJV9 RNA5SP95-201ENST00000410319 137 ntBASIC1.72□□□□□ -2.13
DDX41Q9UJV9 MIR7974-201ENST00000615835 79 ntBASIC1.72□□□□□ -2.13
DDX41Q9UJV9 MIR6740-201ENST00000618268 113 ntBASIC1.72□□□□□ -2.13
DDX41Q9UJV9 Y_RNA.281-201ENST00000364774 94 ntBASIC1.71□□□□□ -2.14
DDX41Q9UJV9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.71□□□□□ -2.14
DDX41Q9UJV9 MIR1912-201ENST00000410389 80 ntBASIC1.71□□□□□ -2.14
DDX41Q9UJV9 MIR18B-201ENST00000454574 71 ntBASIC1.71□□□□□ -2.14
DDX41Q9UJV9 Y_RNA.709-201ENST00000516952 92 ntBASIC1.71□□□□□ -2.14
DDX41Q9UJV9 SNORA4-201ENST00000584302 138 ntBASIC1.71□□□□□ -2.14
DDX41Q9UJV9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.71□□□□□ -2.14
DDX41Q9UJV9 AC012676.2-201ENST00000619258 186 ntBASIC1.71□□□□□ -2.14
DDX41Q9UJV9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.71□□□□□ -2.14
DDX41Q9UJV9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
DDX41Q9UJV9 Y_RNA.344-201ENST00000365381 112 ntBASIC1.7□□□□□ -2.14
DDX41Q9UJV9 Y_RNA.355-201ENST00000365462 98 ntBASIC1.7□□□□□ -2.14
DDX41Q9UJV9 MIR563-201ENST00000385080 79 ntBASIC1.7□□□□□ -2.14
DDX41Q9UJV9 MIR518E-201ENST00000385252 88 ntBASIC1.7□□□□□ -2.14
DDX41Q9UJV9 RNU6-589P-201ENST00000516485 107 ntBASIC1.7□□□□□ -2.14
DDX41Q9UJV9 SNORA31.24-201ENST00000517232 57 ntBASIC1.7□□□□□ -2.14
DDX41Q9UJV9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.7□□□□□ -2.14
DDX41Q9UJV9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.7□□□□□ -2.14
DDX41Q9UJV9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
DDX41Q9UJV9 RNU6-392P-201ENST00000364926 101 ntBASIC1.69□□□□□ -2.14
DDX41Q9UJV9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.69□□□□□ -2.14
DDX41Q9UJV9 RNU6-616P-201ENST00000384353 107 ntBASIC1.69□□□□□ -2.14
DDX41Q9UJV9 SNORA25-201ENST00000384384 134 ntBASIC1.69□□□□□ -2.14
DDX41Q9UJV9 AC036111.3-201ENST00000526389 112 ntBASIC1.69□□□□□ -2.14
DDX41Q9UJV9 AL162726.3-218ENST00000636401 95 ntBASIC1.69□□□□□ -2.14
DDX41Q9UJV9 AC008163.1-202ENST00000636004 2889 ntBASIC1.69□□□□□ -2.14
DDX41Q9UJV9 Y_RNA.85-201ENST00000363014 111 ntBASIC1.68□□□□□ -2.14
DDX41Q9UJV9 SNORD114-10-201ENST00000363409 72 ntBASIC1.68□□□□□ -2.14
DDX41Q9UJV9 RNY1P13-201ENST00000365030 105 ntBASIC1.68□□□□□ -2.14
DDX41Q9UJV9 RNU6-949P-201ENST00000384040 107 ntBASIC1.68□□□□□ -2.14
DDX41Q9UJV9 RNU6-816P-201ENST00000390914 107 ntBASIC1.68□□□□□ -2.14
DDX41Q9UJV9 RNU6-1268P-201ENST00000391214 107 ntBASIC1.68□□□□□ -2.14
DDX41Q9UJV9 RNU6-1239P-201ENST00000391310 107 ntBASIC1.68□□□□□ -2.14
DDX41Q9UJV9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.68□□□□□ -2.14
DDX41Q9UJV9 AC106800.4-201ENST00000614905 153 ntBASIC1.68□□□□□ -2.14
DDX41Q9UJV9 ZNF209P-201ENST00000593450 2304 ntBASIC1.68□□□□□ -2.14
DDX41Q9UJV9 RNA5SP327-201ENST00000362494 101 ntBASIC1.67□□□□□ -2.14
DDX41Q9UJV9 Y_RNA.116-201ENST00000363292 103 ntBASIC1.67□□□□□ -2.14
DDX41Q9UJV9 Y_RNA.549-201ENST00000384657 102 ntBASIC1.67□□□□□ -2.14
DDX41Q9UJV9 RNU6-994P-201ENST00000410507 111 ntBASIC1.67□□□□□ -2.14
DDX41Q9UJV9 RPS29P23-201ENST00000458635 123 ntBASIC1.67□□□□□ -2.14
DDX41Q9UJV9 AC023827.1-201ENST00000569247 97 ntBASIC1.67□□□□□ -2.14
DDX41Q9UJV9 AL035470.1-201ENST00000622571 220 ntBASIC1.67□□□□□ -2.14
DDX41Q9UJV9 MIR30D-201ENST00000362283 70 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 SNORD26-201ENST00000384147 75 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms