Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNA5SP63-201ENST00000391225 112 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 AC069113.3-201ENST00000521019 150 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 AC112693.2-201ENST00000556538 232 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 MIR4643-201ENST00000577473 78 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 AL109933.3-201ENST00000619095 188 ntBASIC0.1□□□□□ -2.39
CLCF1Q9UBD9 RNU6-1229P-201ENST00000364295 107 ntBASIC0.09□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.277-201ENST00000364754 102 ntBASIC0.09□□□□□ -2.4
CLCF1Q9UBD9 RNU6-472P-201ENST00000384299 107 ntBASIC0.09□□□□□ -2.4
CLCF1Q9UBD9 RNU6-578P-201ENST00000390980 103 ntBASIC0.09□□□□□ -2.4
CLCF1Q9UBD9 RNU6-1086P-201ENST00000410930 100 ntBASIC0.09□□□□□ -2.4
CLCF1Q9UBD9 SNORA31.14-201ENST00000516728 116 ntBASIC0.09□□□□□ -2.4
CLCF1Q9UBD9 AC011921.3-201ENST00000605540 361 ntBASIC0.09□□□□□ -2.4
CLCF1Q9UBD9 MIR2909-201ENST00000617113 69 ntBASIC0.09□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.32-201ENST00000362589 110 ntBASIC0.08□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.76-201ENST00000362931 109 ntBASIC0.08□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.476-201ENST00000384347 108 ntBASIC0.08□□□□□ -2.4
CLCF1Q9UBD9 RNU6-1160P-201ENST00000384546 104 ntBASIC0.08□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.536-201ENST00000384621 113 ntBASIC0.08□□□□□ -2.4
CLCF1Q9UBD9 MIR548H3-201ENST00000408771 118 ntBASIC0.08□□□□□ -2.4
CLCF1Q9UBD9 AC096949.1-201ENST00000412047 152 ntBASIC0.08□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.797-201ENST00000515977 94 ntBASIC0.08□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.697-201ENST00000516776 113 ntBASIC0.08□□□□□ -2.4
CLCF1Q9UBD9 RNU6-1149P-201ENST00000516810 97 ntBASIC0.08□□□□□ -2.4
CLCF1Q9UBD9 SCARNA15-202ENST00000516881 127 ntBASIC0.08□□□□□ -2.4
CLCF1Q9UBD9 AP003072.1-201ENST00000531740 145 ntBASIC0.08□□□□□ -2.4
CLCF1Q9UBD9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.08□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.121-201ENST00000363309 113 ntBASIC0.07□□□□□ -2.4
CLCF1Q9UBD9 RNY1P13-201ENST00000365030 105 ntBASIC0.07□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.308-201ENST00000365043 101 ntBASIC0.07□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.539-201ENST00000384635 107 ntBASIC0.07□□□□□ -2.4
CLCF1Q9UBD9 RNU6-535P-201ENST00000384722 107 ntBASIC0.07□□□□□ -2.4
CLCF1Q9UBD9 SCARNA16.5-201ENST00000517114 183 ntBASIC0.07□□□□□ -2.4
CLCF1Q9UBD9 MIR6828-201ENST00000636181 60 ntBASIC0.07□□□□□ -2.4
CLCF1Q9UBD9 SNORA25.7-201ENST00000364375 127 ntBASIC0.06□□□□□ -2.4
CLCF1Q9UBD9 RNU4-16P-201ENST00000364737 141 ntBASIC0.06□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.396-201ENST00000383949 103 ntBASIC0.06□□□□□ -2.4
CLCF1Q9UBD9 RNU4-70P-201ENST00000384579 139 ntBASIC0.06□□□□□ -2.4
CLCF1Q9UBD9 RNU6-291P-201ENST00000384720 107 ntBASIC0.06□□□□□ -2.4
CLCF1Q9UBD9 MIR548F4-201ENST00000408515 105 ntBASIC0.06□□□□□ -2.4
CLCF1Q9UBD9 MTND1P19-201ENST00000511780 315 ntBASIC0.06□□□□□ -2.4
CLCF1Q9UBD9 RNA5SP227-201ENST00000516184 113 ntBASIC0.06□□□□□ -2.4
CLCF1Q9UBD9 RNA5SP47-201ENST00000517230 109 ntBASIC0.06□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.757-201ENST00000578934 114 ntBASIC0.06□□□□□ -2.4
CLCF1Q9UBD9 MIR4639-201ENST00000584938 69 ntBASIC0.06□□□□□ -2.4
CLCF1Q9UBD9 RNU2-4P-201ENST00000606190 192 ntBASIC0.06□□□□□ -2.4
CLCF1Q9UBD9 AC091304.10-201ENST00000641554 121 ntBASIC0.06□□□□□ -2.4
CLCF1Q9UBD9 RNU6-643P-201ENST00000384018 107 ntBASIC0.05□□□□□ -2.4
CLCF1Q9UBD9 RNY1P6-201ENST00000384193 109 ntBASIC0.05□□□□□ -2.4
CLCF1Q9UBD9 SUMO1P3-201ENST00000439961 304 ntBASIC0.05□□□□□ -2.4
CLCF1Q9UBD9 AC069271.1-201ENST00000445577 156 ntBASIC0.05□□□□□ -2.4
CLCF1Q9UBD9 RNU7-79P-201ENST00000516082 62 ntBASIC0.05□□□□□ -2.4
CLCF1Q9UBD9 RNU6-1194P-201ENST00000516208 104 ntBASIC0.05□□□□□ -2.4
CLCF1Q9UBD9 RNY3P16-201ENST00000516338 101 ntBASIC0.05□□□□□ -2.4
CLCF1Q9UBD9 SNORA25.16-201ENST00000516741 121 ntBASIC0.05□□□□□ -2.4
CLCF1Q9UBD9 MIR7107-201ENST00000611489 80 ntBASIC0.05□□□□□ -2.4
CLCF1Q9UBD9 MTND5P32-201ENST00000560711 1802 ntBASIC0.04□□□□□ -2.4
CLCF1Q9UBD9 SNORA9.1-201ENST00000362412 131 ntBASIC0.04□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.145-201ENST00000363527 102 ntBASIC0.04□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.288-201ENST00000364854 92 ntBASIC0.04□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.326-201ENST00000365176 113 ntBASIC0.04□□□□□ -2.4
CLCF1Q9UBD9 RNY4P28-201ENST00000365281 93 ntBASIC0.04□□□□□ -2.4
CLCF1Q9UBD9 RNU6-187P-201ENST00000384139 106 ntBASIC0.04□□□□□ -2.4
CLCF1Q9UBD9 SNORD28-201ENST00000384706 75 ntBASIC0.04□□□□□ -2.4
CLCF1Q9UBD9 RNU6-493P-201ENST00000391321 108 ntBASIC0.04□□□□□ -2.4
CLCF1Q9UBD9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.04□□□□□ -2.4
CLCF1Q9UBD9 SNORD127-201ENST00000458892 86 ntBASIC0.04□□□□□ -2.4
CLCF1Q9UBD9 DEFB131E-201ENST00000532329 154 ntBASIC0.04□□□□□ -2.4
CLCF1Q9UBD9 AL117187.1-201ENST00000555482 181 ntBASIC0.04□□□□□ -2.4
CLCF1Q9UBD9 MTND5P34-201ENST00000568888 325 ntBASIC0.04□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.47-201ENST00000362697 108 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.85-201ENST00000363014 111 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 SNORA42.1-201ENST00000363515 137 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 Y_RNA.149-201ENST00000363558 117 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 MIR606-201ENST00000384851 96 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 RNU2-38P-201ENST00000410856 79 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 AL022718.1-201ENST00000412004 84 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 RNU6-848P-201ENST00000515948 107 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 RNU6-617P-201ENST00000516147 107 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 RNU6-473P-201ENST00000516164 107 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 RNU6-1258P-201ENST00000516911 111 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 RNU7-35P-201ENST00000517174 62 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 AC008737.2-201ENST00000599446 118 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 MIR6755-201ENST00000619993 66 ntBASIC0.03□□□□□ -2.4
CLCF1Q9UBD9 SNORD114-5-201ENST00000362928 70 ntBASIC0.02□□□□□ -2.41
CLCF1Q9UBD9 RNU4-58P-201ENST00000363192 141 ntBASIC0.02□□□□□ -2.41
CLCF1Q9UBD9 SNORA63-201ENST00000363450 132 ntBASIC0.02□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.171-201ENST00000363760 102 ntBASIC0.02□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.182-201ENST00000363880 111 ntBASIC0.02□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.571-201ENST00000384753 98 ntBASIC0.02□□□□□ -2.41
CLCF1Q9UBD9 MIRLET7F2-201ENST00000385277 83 ntBASIC0.02□□□□□ -2.41
CLCF1Q9UBD9 PCNPP3-201ENST00000393579 471 ntBASIC0.02□□□□□ -2.41
CLCF1Q9UBD9 RNA5SP144-201ENST00000410846 116 ntBASIC0.02□□□□□ -2.41
CLCF1Q9UBD9 RNU7-113P-201ENST00000459273 62 ntBASIC0.02□□□□□ -2.41
CLCF1Q9UBD9 MIR5190-201ENST00000581537 80 ntBASIC0.02□□□□□ -2.41
CLCF1Q9UBD9 AC244669.1-204ENST00000621564 178 ntBASIC0.02□□□□□ -2.41
CLCF1Q9UBD9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.02□□□□□ -2.41
CLCF1Q9UBD9 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
CLCF1Q9UBD9 RNU6-275P-201ENST00000364910 107 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 283.1 ms