Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.77□□□□□ -2.53
VAPAQ9P0L0 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.77□□□□□ -2.53
VAPAQ9P0L0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.77□□□□□ -2.53
VAPAQ9P0L0 MIR4473-201ENST00000583731 91 ntBASIC-0.77□□□□□ -2.53
VAPAQ9P0L0 AC108676.2-201ENST00000605225 163 ntBASIC-0.77□□□□□ -2.53
VAPAQ9P0L0 AC084781.2-201ENST00000615568 161 ntBASIC-0.77□□□□□ -2.53
VAPAQ9P0L0 SNORD114-14-201ENST00000362723 75 ntBASIC-0.78□□□□□ -2.53
VAPAQ9P0L0 SNRPGP8-201ENST00000454064 226 ntBASIC-0.78□□□□□ -2.53
VAPAQ9P0L0 RNU6-758P-201ENST00000516292 89 ntBASIC-0.78□□□□□ -2.53
VAPAQ9P0L0 AL008718.3-201ENST00000610217 321 ntBASIC-0.78□□□□□ -2.53
VAPAQ9P0L0 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.79□□□□□ -2.54
VAPAQ9P0L0 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.79□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.79□□□□□ -2.54
VAPAQ9P0L0 MT-TQ-201ENST00000387372 72 ntBASIC-0.79□□□□□ -2.54
VAPAQ9P0L0 AL731563.1-201ENST00000442202 214 ntBASIC-0.79□□□□□ -2.54
VAPAQ9P0L0 MIR3681-201ENST00000580089 72 ntBASIC-0.79□□□□□ -2.54
VAPAQ9P0L0 AC097639.2-201ENST00000603159 172 ntBASIC-0.79□□□□□ -2.54
VAPAQ9P0L0 RNU6-86P-201ENST00000606534 107 ntBASIC-0.79□□□□□ -2.54
VAPAQ9P0L0 AC092794.1-201ENST00000612734 582 ntBASIC-0.79□□□□□ -2.54
VAPAQ9P0L0 snoU18.1-201ENST00000629629 71 ntBASIC-0.79□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.8□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.8□□□□□ -2.54
VAPAQ9P0L0 SNORD95.1-201ENST00000364099 68 ntBASIC-0.8□□□□□ -2.54
VAPAQ9P0L0 RNU4-16P-201ENST00000364737 141 ntBASIC-0.8□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.8□□□□□ -2.54
VAPAQ9P0L0 MT-TL1-201ENST00000386347 75 ntBASIC-0.8□□□□□ -2.54
VAPAQ9P0L0 RNU6-735P-201ENST00000410612 107 ntBASIC-0.8□□□□□ -2.54
VAPAQ9P0L0 RNU6-893P-201ENST00000458841 100 ntBASIC-0.8□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.8□□□□□ -2.54
VAPAQ9P0L0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.8□□□□□ -2.54
VAPAQ9P0L0 AC112487.2-201ENST00000637950 304 ntBASIC-0.8□□□□□ -2.54
VAPAQ9P0L0 SNORA25.1-201ENST00000362326 128 ntBASIC-0.81□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.81□□□□□ -2.54
VAPAQ9P0L0 RNU6-47P-201ENST00000383866 107 ntBASIC-0.81□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.81□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.81□□□□□ -2.54
VAPAQ9P0L0 MIR224-201ENST00000384889 81 ntBASIC-0.81□□□□□ -2.54
VAPAQ9P0L0 MT-TT-201ENST00000387460 66 ntBASIC-0.81□□□□□ -2.54
VAPAQ9P0L0 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.81□□□□□ -2.54
VAPAQ9P0L0 RNU6-175P-201ENST00000516896 107 ntBASIC-0.81□□□□□ -2.54
VAPAQ9P0L0 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.81□□□□□ -2.54
VAPAQ9P0L0 MIR548H5-201ENST00000580314 60 ntBASIC-0.81□□□□□ -2.54
VAPAQ9P0L0 AC093726.3-201ENST00000637588 150 ntBASIC-0.81□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.82□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.82□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.82□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.82□□□□□ -2.54
VAPAQ9P0L0 MIR9-2-201ENST00000384838 87 ntBASIC-0.82□□□□□ -2.54
VAPAQ9P0L0 MIR196A1-201ENST00000388006 70 ntBASIC-0.82□□□□□ -2.54
VAPAQ9P0L0 SNORD115-46-201ENST00000390982 71 ntBASIC-0.82□□□□□ -2.54
VAPAQ9P0L0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.82□□□□□ -2.54
VAPAQ9P0L0 MTND4LP30-201ENST00000454092 297 ntBASIC-0.82□□□□□ -2.54
VAPAQ9P0L0 SNORD38.3-201ENST00000516599 73 ntBASIC-0.82□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.82□□□□□ -2.54
VAPAQ9P0L0 RNU6-509P-201ENST00000363519 107 ntBASIC-0.83□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.83□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.83□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.83□□□□□ -2.54
VAPAQ9P0L0 RNA5SP368-201ENST00000364298 116 ntBASIC-0.83□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.83□□□□□ -2.54
VAPAQ9P0L0 SNORD56B-201ENST00000384713 71 ntBASIC-0.83□□□□□ -2.54
VAPAQ9P0L0 MIR204-201ENST00000385200 110 ntBASIC-0.83□□□□□ -2.54
VAPAQ9P0L0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
VAPAQ9P0L0 Z95118.1-201ENST00000421372 247 ntBASIC-0.83□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.83□□□□□ -2.54
VAPAQ9P0L0 RNU7-35P-201ENST00000517174 62 ntBASIC-0.83□□□□□ -2.54
VAPAQ9P0L0 AC037487.3-201ENST00000606668 112 ntBASIC-0.83□□□□□ -2.54
VAPAQ9P0L0 RNY1P2-201ENST00000364820 117 ntBASIC-0.84□□□□□ -2.54
VAPAQ9P0L0 RNU6-290P-201ENST00000365212 101 ntBASIC-0.84□□□□□ -2.54
VAPAQ9P0L0 RNY3P5-201ENST00000384127 102 ntBASIC-0.84□□□□□ -2.54
VAPAQ9P0L0 RNU6-35P-201ENST00000384530 107 ntBASIC-0.84□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.84□□□□□ -2.54
VAPAQ9P0L0 SNORD116-4-201ENST00000384733 96 ntBASIC-0.84□□□□□ -2.54
VAPAQ9P0L0 MIR181B2-201ENST00000385004 89 ntBASIC-0.84□□□□□ -2.54
VAPAQ9P0L0 SNORA53-201ENST00000391141 249 ntBASIC-0.84□□□□□ -2.54
VAPAQ9P0L0 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.84□□□□□ -2.54
VAPAQ9P0L0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.84□□□□□ -2.54
VAPAQ9P0L0 MIR4280-201ENST00000582178 76 ntBASIC-0.84□□□□□ -2.54
VAPAQ9P0L0 MIR548AE1-201ENST00000583292 70 ntBASIC-0.84□□□□□ -2.54
VAPAQ9P0L0 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.85□□□□□ -2.55
VAPAQ9P0L0 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.85□□□□□ -2.55
VAPAQ9P0L0 SNORD114-25-201ENST00000363742 72 ntBASIC-0.85□□□□□ -2.55
VAPAQ9P0L0 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.85□□□□□ -2.55
VAPAQ9P0L0 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.85□□□□□ -2.55
VAPAQ9P0L0 RNU6-277P-201ENST00000516272 106 ntBASIC-0.85□□□□□ -2.55
VAPAQ9P0L0 SNORA27.4-201ENST00000516650 95 ntBASIC-0.85□□□□□ -2.55
VAPAQ9P0L0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.85□□□□□ -2.55
VAPAQ9P0L0 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.86□□□□□ -2.55
VAPAQ9P0L0 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.86□□□□□ -2.55
VAPAQ9P0L0 MIR539-201ENST00000365690 78 ntBASIC-0.86□□□□□ -2.55
VAPAQ9P0L0 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.86□□□□□ -2.55
VAPAQ9P0L0 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.86□□□□□ -2.55
VAPAQ9P0L0 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
VAPAQ9P0L0 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.86□□□□□ -2.55
VAPAQ9P0L0 AL606845.1-201ENST00000404881 255 ntBASIC-0.86□□□□□ -2.55
VAPAQ9P0L0 RNU7-152P-201ENST00000458982 64 ntBASIC-0.86□□□□□ -2.55
VAPAQ9P0L0 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.86□□□□□ -2.55
VAPAQ9P0L0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.86□□□□□ -2.55
VAPAQ9P0L0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.86□□□□□ -2.55
VAPAQ9P0L0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms