Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 PCNPP3-201ENST00000393579 471 ntBASIC0.77□□□□□ -2.29
SLC6A13Q9NSD5 AC244098.3-201ENST00000424803 96 ntBASIC0.77□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-1258P-201ENST00000516911 111 ntBASIC0.77□□□□□ -2.29
SLC6A13Q9NSD5 AC098479.1-201ENST00000609225 154 ntBASIC0.77□□□□□ -2.29
SLC6A13Q9NSD5 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.77□□□□□ -2.29
SLC6A13Q9NSD5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.77□□□□□ -2.29
SLC6A13Q9NSD5 Y_RNA.778-201ENST00000620203 90 ntBASIC0.77□□□□□ -2.29
SLC6A13Q9NSD5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SLC6A13Q9NSD5 RNY1P11-201ENST00000363759 113 ntBASIC0.76□□□□□ -2.29
SLC6A13Q9NSD5 SNORA18-201ENST00000384416 132 ntBASIC0.76□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-110P-201ENST00000384508 104 ntBASIC0.76□□□□□ -2.29
SLC6A13Q9NSD5 RNU1-119P-201ENST00000391122 165 ntBASIC0.76□□□□□ -2.29
SLC6A13Q9NSD5 AC108059.2-201ENST00000434626 151 ntBASIC0.76□□□□□ -2.29
SLC6A13Q9NSD5 RPL39P25-201ENST00000449384 154 ntBASIC0.76□□□□□ -2.29
SLC6A13Q9NSD5 RNU7-56P-201ENST00000458744 62 ntBASIC0.76□□□□□ -2.29
SLC6A13Q9NSD5 AC141846.1-201ENST00000568348 142 ntBASIC0.76□□□□□ -2.29
SLC6A13Q9NSD5 AC011195.1-201ENST00000578177 177 ntBASIC0.76□□□□□ -2.29
SLC6A13Q9NSD5 MIR6857-201ENST00000613267 93 ntBASIC0.76□□□□□ -2.29
SLC6A13Q9NSD5 Y_RNA.150-201ENST00000363562 102 ntBASIC0.75□□□□□ -2.29
SLC6A13Q9NSD5 Y_RNA.171-201ENST00000363760 102 ntBASIC0.75□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-151P-201ENST00000364158 107 ntBASIC0.75□□□□□ -2.29
SLC6A13Q9NSD5 SNORD116-18-201ENST00000383961 92 ntBASIC0.75□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-886P-201ENST00000384319 105 ntBASIC0.75□□□□□ -2.29
SLC6A13Q9NSD5 MIR573-201ENST00000384964 99 ntBASIC0.75□□□□□ -2.29
SLC6A13Q9NSD5 MIR613-201ENST00000385248 95 ntBASIC0.75□□□□□ -2.29
SLC6A13Q9NSD5 AL603914.1-201ENST00000401964 204 ntBASIC0.75□□□□□ -2.29
SLC6A13Q9NSD5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
SLC6A13Q9NSD5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.75□□□□□ -2.29
SLC6A13Q9NSD5 RNU7-113P-201ENST00000459273 62 ntBASIC0.75□□□□□ -2.29
SLC6A13Q9NSD5 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-1130P-201ENST00000365434 107 ntBASIC0.74□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-364P-201ENST00000384387 107 ntBASIC0.74□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-342P-201ENST00000384521 104 ntBASIC0.74□□□□□ -2.29
SLC6A13Q9NSD5 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
SLC6A13Q9NSD5 AL606490.4-201ENST00000423117 127 ntBASIC0.74□□□□□ -2.29
SLC6A13Q9NSD5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.74□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-240P-201ENST00000516098 97 ntBASIC0.74□□□□□ -2.29
SLC6A13Q9NSD5 Y_RNA.690-201ENST00000516603 95 ntBASIC0.74□□□□□ -2.29
SLC6A13Q9NSD5 AC133485.4-201ENST00000561835 220 ntBASIC0.74□□□□□ -2.29
SLC6A13Q9NSD5 AC138907.4-201ENST00000570107 226 ntBASIC0.74□□□□□ -2.29
SLC6A13Q9NSD5 MIR4305-201ENST00000583252 102 ntBASIC0.74□□□□□ -2.29
SLC6A13Q9NSD5 SNORD92-201ENST00000585078 85 ntBASIC0.74□□□□□ -2.29
SLC6A13Q9NSD5 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
SLC6A13Q9NSD5 SNORD115-2-201ENST00000362842 82 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 SNORD115-20-201ENST00000365099 82 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-949P-201ENST00000384040 107 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 Y_RNA.555-201ENST00000384673 110 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-447P-201ENST00000410293 104 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-1118P-201ENST00000410382 104 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-1076P-201ENST00000410397 104 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-355P-201ENST00000410427 104 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-791P-201ENST00000410467 104 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-705P-201ENST00000410601 104 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-1100P-201ENST00000410691 104 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-860P-201ENST00000410860 104 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-1086P-201ENST00000410930 100 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-1217P-201ENST00000411276 104 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-785P-201ENST00000411324 104 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RNU7-197P-201ENST00000458836 62 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 Y_RNA.651-201ENST00000459380 103 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 Y_RNA.686-201ENST00000516548 134 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RNU7-156P-201ENST00000517214 74 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 MIR3144-201ENST00000579460 79 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 U6.90-201ENST00000614007 104 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 U6.70-201ENST00000620287 104 ntBASIC0.73□□□□□ -2.29
SLC6A13Q9NSD5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-804P-201ENST00000384286 107 ntBASIC0.72□□□□□ -2.29
SLC6A13Q9NSD5 Y_RNA.470-201ENST00000384307 117 ntBASIC0.72□□□□□ -2.29
SLC6A13Q9NSD5 Y_RNA.540-201ENST00000384638 111 ntBASIC0.72□□□□□ -2.29
SLC6A13Q9NSD5 MIR598-201ENST00000384868 97 ntBASIC0.72□□□□□ -2.29
SLC6A13Q9NSD5 SNORD93-201ENST00000408813 74 ntBASIC0.72□□□□□ -2.29
SLC6A13Q9NSD5 RNU7-102P-201ENST00000458948 62 ntBASIC0.72□□□□□ -2.29
SLC6A13Q9NSD5 CYP3A137P-201ENST00000562436 69 ntBASIC0.72□□□□□ -2.29
SLC6A13Q9NSD5 AC021443.1-201ENST00000604478 211 ntBASIC0.72□□□□□ -2.29
SLC6A13Q9NSD5 PVT1_3.1-201ENST00000620853 95 ntBASIC0.72□□□□□ -2.29
SLC6A13Q9NSD5 RNU6-309P-201ENST00000364573 106 ntBASIC0.71□□□□□ -2.3
SLC6A13Q9NSD5 MIR513C-201ENST00000401352 84 ntBASIC0.71□□□□□ -2.3
SLC6A13Q9NSD5 COX6CP6-201ENST00000490840 228 ntBASIC0.71□□□□□ -2.3
SLC6A13Q9NSD5 RNA5SP33-201ENST00000516687 98 ntBASIC0.71□□□□□ -2.3
SLC6A13Q9NSD5 RNU7-35P-201ENST00000517174 62 ntBASIC0.71□□□□□ -2.3
SLC6A13Q9NSD5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.71□□□□□ -2.3
SLC6A13Q9NSD5 MIR5000-201ENST00000577717 103 ntBASIC0.71□□□□□ -2.3
SLC6A13Q9NSD5 AC090897.1-201ENST00000580909 226 ntBASIC0.71□□□□□ -2.3
SLC6A13Q9NSD5 Y_RNA.8-201ENST00000362353 102 ntBASIC0.7□□□□□ -2.3
SLC6A13Q9NSD5 RNY1P13-201ENST00000365030 105 ntBASIC0.7□□□□□ -2.3
SLC6A13Q9NSD5 U8.15-201ENST00000390947 134 ntBASIC0.7□□□□□ -2.3
SLC6A13Q9NSD5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.7□□□□□ -2.3
SLC6A13Q9NSD5 RNU4-83P-201ENST00000410863 133 ntBASIC0.7□□□□□ -2.3
SLC6A13Q9NSD5 RNA5SP436-201ENST00000516020 115 ntBASIC0.7□□□□□ -2.3
SLC6A13Q9NSD5 RNU2-35P-201ENST00000516446 142 ntBASIC0.7□□□□□ -2.3
SLC6A13Q9NSD5 RNA5SP480-201ENST00000516840 109 ntBASIC0.7□□□□□ -2.3
SLC6A13Q9NSD5 AC004812.1-201ENST00000540773 146 ntBASIC0.7□□□□□ -2.3
SLC6A13Q9NSD5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.7□□□□□ -2.3
SLC6A13Q9NSD5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.7□□□□□ -2.3
SLC6A13Q9NSD5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
SLC6A13Q9NSD5 RNU6-508P-201ENST00000363231 103 ntBASIC0.69□□□□□ -2.3
SLC6A13Q9NSD5 RNU4-45P-201ENST00000365469 141 ntBASIC0.69□□□□□ -2.3
SLC6A13Q9NSD5 Y_RNA.398-201ENST00000383952 99 ntBASIC0.69□□□□□ -2.3
SLC6A13Q9NSD5 Y_RNA.531-201ENST00000384589 121 ntBASIC0.69□□□□□ -2.3
SLC6A13Q9NSD5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 246.4 ms